RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RNF17Q9BXT8 1623 aaKnown RBP32.82■■■□□ 2.84
HCFC1R1-201ENST00000248089 FAM135AQ9P2D6 1515 aa32.81■■■□□ 2.84
HCFC1R1-201ENST00000248089 MYO3AQ8NEV4 1616 aa32.8■■■□□ 2.84
HCFC1R1-201ENST00000248089 DUOX2Q9NRD8 1548 aa32.8■■■□□ 2.84
HCFC1R1-201ENST00000248089 PTPRKQ15262 1439 aa32.78■■■□□ 2.84
HCFC1R1-201ENST00000248089 STRCQ7RTU9 1775 aa32.77■■■□□ 2.84
HCFC1R1-201ENST00000248089 KIF15Q9NS87 1388 aa32.75■■■□□ 2.83
HCFC1R1-201ENST00000248089 ZNF142P52746 1687 aaPredicted RBP32.74■■■□□ 2.83
HCFC1R1-201ENST00000248089 WASHC2CQ9Y4E1 1318 aa32.74■■■□□ 2.83
HCFC1R1-201ENST00000248089 ZC3H13Q5T200 1668 aaKnown RBP32.73■■■□□ 2.83
HCFC1R1-201ENST00000248089 FAM50AQ14320 339 aaKnown RBP32.73■■■□□ 2.83
HCFC1R1-201ENST00000248089 MROH1Q8NDA8 1641 aa32.71■■■□□ 2.83
HCFC1R1-201ENST00000248089 RRP7BPQ9NSQ0 103 aa32.71■■■□□ 2.83
HCFC1R1-201ENST00000248089 CEP152O94986 1710 aa32.71■■■□□ 2.83
HCFC1R1-201ENST00000248089 CEP170BQ9Y4F5 1589 aaPredicted RBP32.7■■■□□ 2.82
HCFC1R1-201ENST00000248089 CHIC2Q9UKJ5 165 aa32.69■■■□□ 2.82
HCFC1R1-201ENST00000248089 PZPP20742 1482 aa32.68■■■□□ 2.82
HCFC1R1-201ENST00000248089 ABCC3O15438 1527 aa32.67■■■□□ 2.82
HCFC1R1-201ENST00000248089 ERBINQ96RT1 1412 aa32.67■■■□□ 2.82
HCFC1R1-201ENST00000248089 PPARGC1BQ86YN6 1023 aaKnown RBP32.66■■■□□ 2.82
HCFC1R1-201ENST00000248089 CAMSAP1Q5T5Y3 1602 aa32.66■■■□□ 2.82
HCFC1R1-201ENST00000248089 ANKRD30AQ9BXX3 1397 aa32.65■■■□□ 2.82
HCFC1R1-201ENST00000248089 PRDM15P57071 1507 aaPredicted RBP32.61■■■□□ 2.81
HCFC1R1-201ENST00000248089 FBXO31Q5XUX0 539 aaPredicted RBP32.61■■■□□ 2.81
HCFC1R1-201ENST00000248089 NCOA1Q15788 1441 aa32.6■■■□□ 2.81
HCFC1R1-201ENST00000248089 TNRQ92752 1358 aa32.59■■■□□ 2.81
HCFC1R1-201ENST00000248089 DEPDC5O75140 1603 aa32.59■■■□□ 2.81
HCFC1R1-201ENST00000248089 ADGRL2O95490 1459 aa32.59■■■□□ 2.81
HCFC1R1-201ENST00000248089 ILDR1Q86SU0 546 aaPredicted RBP32.58■■■□□ 2.81
HCFC1R1-201ENST00000248089 A2ML1A8K2U0 1454 aa32.56■■■□□ 2.8
HCFC1R1-201ENST00000248089 CFAP65Q6ZU64 1925 aaKnown RBP32.56■■■□□ 2.8
HCFC1R1-201ENST00000248089 DMRT2Q9Y5R5 561 aa32.56■■■□□ 2.8
HCFC1R1-201ENST00000248089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.52■■■□□ 2.8
HCFC1R1-201ENST00000248089 PTPRTO14522 1441 aa32.5■■■□□ 2.79
HCFC1R1-201ENST00000248089 SPATA31D1Q6ZQQ2 1576 aa32.49■■■□□ 2.79
HCFC1R1-201ENST00000248089 PLA2R1Q13018 1463 aa32.49■■■□□ 2.79
HCFC1R1-201ENST00000248089 ERVK-7P63135 1459 aa32.48■■■□□ 2.79
HCFC1R1-201ENST00000248089 KANK1Q14678 1352 aa32.47■■■□□ 2.79
HCFC1R1-201ENST00000248089 NLRP1Q9C000 1473 aa32.46■■■□□ 2.79
HCFC1R1-201ENST00000248089 NCKAP5LQ9HCH0 1330 aa32.46■■■□□ 2.79
HCFC1R1-201ENST00000248089 POLR1AO95602 1720 aaPredicted RBP32.45■■■□□ 2.78
HCFC1R1-201ENST00000248089 ANKRD50Q9ULJ7 1429 aa32.42■■■□□ 2.78
HCFC1R1-201ENST00000248089 UGGT1Q9NYU2 1555 aa32.41■■■□□ 2.78
HCFC1R1-201ENST00000248089 ITGAEP38570 1179 aa32.4■■■□□ 2.78
HCFC1R1-201ENST00000248089 VWDEQ8N2E2 1590 aa32.4■■■□□ 2.78
HCFC1R1-201ENST00000248089 PKD2Q13563 968 aa32.38■■■□□ 2.77
HCFC1R1-201ENST00000248089 ARHGAP31Q2M1Z3 1444 aa32.37■■■□□ 2.77
HCFC1R1-201ENST00000248089 FBXO41Q8TF61 875 aa32.37■■■□□ 2.77
HCFC1R1-201ENST00000248089 LMTK2Q8IWU2 1503 aa32.36■■■□□ 2.77
HCFC1R1-201ENST00000248089 CERKQ8TCT0 537 aa32.36■■■□□ 2.77
HCFC1R1-201ENST00000248089 ROCK1Q13464 1354 aa32.34■■■□□ 2.77
HCFC1R1-201ENST00000248089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.34■■■□□ 2.77
HCFC1R1-201ENST00000248089 EFCAB6Q5THR3 1501 aa32.33■■■□□ 2.77
HCFC1R1-201ENST00000248089 UNC13BO14795 1591 aa32.32■■■□□ 2.76
HCFC1R1-201ENST00000248089 NEURL4Q96JN8 1562 aa32.32■■■□□ 2.76
HCFC1R1-201ENST00000248089 UBR1Q8IWV7 1749 aa32.31■■■□□ 2.76
HCFC1R1-201ENST00000248089 THEMISQ8N1K5 641 aaPredicted RBP32.3■■■□□ 2.76
HCFC1R1-201ENST00000248089 RRBP1Q9P2E9 1410 aaKnown RBP32.28■■■□□ 2.76
HCFC1R1-201ENST00000248089 LTBP4Q8N2S1 1624 aa32.28■■■□□ 2.76
HCFC1R1-201ENST00000248089 TET3O43151 1660 aa32.26■■■□□ 2.75
HCFC1R1-201ENST00000248089 PIK3C2BO00750 1634 aa32.26■■■□□ 2.75
HCFC1R1-201ENST00000248089 GCC2Q8IWJ2 1684 aa32.24■■■□□ 2.75
HCFC1R1-201ENST00000248089 ANKLE2Q86XL3 938 aa32.23■■■□□ 2.75
HCFC1R1-201ENST00000248089 SYNMO15061 1565 aa32.23■■■□□ 2.75
HCFC1R1-201ENST00000248089 ZNF335Q9H4Z2 1342 aaPredicted RBP32.21■■■□□ 2.75
HCFC1R1-201ENST00000248089 IQGAP1P46940 1657 aa32.19■■■□□ 2.74
HCFC1R1-201ENST00000248089 IQGAP3Q86VI3 1631 aa32.18■■■□□ 2.74
HCFC1R1-201ENST00000248089 RPRD2Q5VT52 1461 aaKnown RBP32.16■■■□□ 2.74
HCFC1R1-201ENST00000248089 NPHP4O75161 1426 aaPredicted RBP32.16■■■□□ 2.74
HCFC1R1-201ENST00000248089 NOS1P29475 1434 aa32.15■■■□□ 2.74
HCFC1R1-201ENST00000248089 MED14O60244 1454 aa32.14■■■□□ 2.74
HCFC1R1-201ENST00000248089 E9PCH4 1651 aa32.14■■■□□ 2.74
HCFC1R1-201ENST00000248089 KDM5AP29375 1690 aaKnown RBP32.13■■■□□ 2.73
HCFC1R1-201ENST00000248089 STAG3Q9UJ98 1225 aa32.12■■■□□ 2.73
HCFC1R1-201ENST00000248089 SLIT1O75093 1534 aa32.1■■■□□ 2.73
HCFC1R1-201ENST00000248089 SCAF11Q99590 1463 aaKnown RBP32.1■■■□□ 2.73
HCFC1R1-201ENST00000248089 ADGRB3O60242 1522 aa32.09■■■□□ 2.73
HCFC1R1-201ENST00000248089 IQSEC2Q5JU85 1478 aa32.08■■■□□ 2.73
HCFC1R1-201ENST00000248089 ARHGAP23Q9P227 1491 aa32.08■■■□□ 2.73
HCFC1R1-201ENST00000248089 NUP155O75694 1391 aa32.07■■■□□ 2.73
HCFC1R1-201ENST00000248089 IDI1Q13907 227 aa32.07■■■□□ 2.72
HCFC1R1-201ENST00000248089 MYO5BQ9ULV0 1848 aa32.05■■■□□ 2.72
HCFC1R1-201ENST00000248089 TMEM2Q9UHN6 1383 aa32.02■■■□□ 2.72
HCFC1R1-201ENST00000248089 TXNDC2Q86VQ3 553 aa32.01■■■□□ 2.71
HCFC1R1-201ENST00000248089 NAIPQ13075 1403 aa32■■■□□ 2.71
HCFC1R1-201ENST00000248089 LTKP29376 864 aa32■■■□□ 2.71
HCFC1R1-201ENST00000248089 SLC52A1Q9NWF4 448 aa32■■■□□ 2.71
HCFC1R1-201ENST00000248089 EID1Q9Y6B2 187 aa32■■■□□ 2.71
HCFC1R1-201ENST00000248089 CPS1P31327 1500 aa32■■■□□ 2.71
HCFC1R1-201ENST00000248089 STRCP1A6NGW2 1772 aa31.96■■■□□ 2.71
HCFC1R1-201ENST00000248089 SPHKAPQ2M3C7 1700 aa31.95■■■□□ 2.7
HCFC1R1-201ENST00000248089 TMEM131LA2VDJ0 1609 aa31.94■■■□□ 2.7
HCFC1R1-201ENST00000248089 HFM1A2PYH4 1435 aa31.93■■■□□ 2.7
HCFC1R1-201ENST00000248089 CHGAP10645 457 aaKnown RBP31.88■■■□□ 2.69
HCFC1R1-201ENST00000248089 UBAP1LF5GYI3 381 aa31.86■■■□□ 2.69
HCFC1R1-201ENST00000248089 RIMS2Q9UQ26 1411 aa31.83■■■□□ 2.69
HCFC1R1-201ENST00000248089 ZFYVE9O95405 1425 aa31.82■■■□□ 2.68
HCFC1R1-201ENST00000248089 TRIM52Q96A61 297 aa31.81■■■□□ 2.68
HCFC1R1-201ENST00000248089 SENP3Q9H4L4 574 aaPredicted RBP31.8■■■□□ 2.68
HCFC1R1-201ENST00000248089 BCANQ96GW7 911 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms