RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PLA2R1Q13018 1463 aa16.26■□□□□ 0.19
SEC61A1-201ENST00000243253 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
SEC61A1-201ENST00000243253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.195e-7■□□□□ 10.1
SEC61A1-201ENST00000243253 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
SEC61A1-201ENST00000243253 RNF17Q9BXT8 1623 aaKnown RBP16.25■□□□□ 0.19
SEC61A1-201ENST00000243253 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
SEC61A1-201ENST00000243253 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
SEC61A1-201ENST00000243253 BRD4O60885 1362 aaPredicted RBP16.24■□□□□ 0.19
SEC61A1-201ENST00000243253 PRAG1Q86YV5 1406 aa16.24■□□□□ 0.19
SEC61A1-201ENST00000243253 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
SEC61A1-201ENST00000243253 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
SEC61A1-201ENST00000243253 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
SEC61A1-201ENST00000243253 MYT1LQ9UL68 1186 aa16.23■□□□□ 0.19
SEC61A1-201ENST00000243253 GPRASP1Q5JY77 1395 aa16.23■□□□□ 0.19
SEC61A1-201ENST00000243253 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
SEC61A1-201ENST00000243253 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
SEC61A1-201ENST00000243253 NUP155O75694 1391 aa16.21■□□□□ 0.19
SEC61A1-201ENST00000243253 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.19
SEC61A1-201ENST00000243253 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
SEC61A1-201ENST00000243253 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
SEC61A1-201ENST00000243253 TTC37Q6PGP7 1564 aa16.19■□□□□ 0.18
SEC61A1-201ENST00000243253 A2MP01023 1474 aa16.18■□□□□ 0.18
SEC61A1-201ENST00000243253 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
SEC61A1-201ENST00000243253 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
SEC61A1-201ENST00000243253 ATP10AO60312 1499 aa16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 CCDC141Q6ZP82 1450 aa16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 INSRP06213 1382 aa16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 JPH4Q96JJ6 628 aa16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 MYBBP1AQ9BQG0 1328 aaKnown RBP16.17■□□□□ 0.18
SEC61A1-201ENST00000243253 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
SEC61A1-201ENST00000243253 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
SEC61A1-201ENST00000243253 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.17
SEC61A1-201ENST00000243253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■□□ 16.6
SEC61A1-201ENST00000243253 RALBP1Q15311 655 aa16.13■□□□□ 0.17
SEC61A1-201ENST00000243253 SYCP2Q9BX26 1530 aa16.13■□□□□ 0.17
SEC61A1-201ENST00000243253 EIF2AK4Q9P2K8 1649 aaKnown RBP16.13■□□□□ 0.17
SEC61A1-201ENST00000243253 TESK2Q96S53 571 aa16.11■□□□□ 0.17
SEC61A1-201ENST00000243253 MYOM1P52179 1685 aa16.1■□□□□ 0.17
SEC61A1-201ENST00000243253 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
SEC61A1-201ENST00000243253 MADDQ8WXG6 1647 aa16.09■□□□□ 0.17
SEC61A1-201ENST00000243253 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
SEC61A1-201ENST00000243253 RRP1P56182 461 aaKnown RBP16.09■□□□□ 0.17
SEC61A1-201ENST00000243253 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.17
SEC61A1-201ENST00000243253 DCAF11Q8TEB1 546 aa16.08■□□□□ 0.16
SEC61A1-201ENST00000243253 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
SEC61A1-201ENST00000243253 TMC1Q8TDI8 760 aa16.07■□□□□ 0.16
SEC61A1-201ENST00000243253 SPHKAPQ2M3C7 1700 aa16.07■□□□□ 0.16
SEC61A1-201ENST00000243253 CHD1O14646 1710 aa16.07■□□□□ 0.16
SEC61A1-201ENST00000243253 CEP152O94986 1710 aa16.06■□□□□ 0.16
SEC61A1-201ENST00000243253 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
SEC61A1-201ENST00000243253 NBPF1Q3BBV0 1214 aa16.06■□□□□ 0.16
SEC61A1-201ENST00000243253 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
SEC61A1-201ENST00000243253 WDR7Q9Y4E6 1490 aa16.05■□□□□ 0.16
SEC61A1-201ENST00000243253 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
SEC61A1-201ENST00000243253 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
SEC61A1-201ENST00000243253 DEPDC5O75140 1603 aa16.04■□□□□ 0.16
SEC61A1-201ENST00000243253 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
SEC61A1-201ENST00000243253 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
SEC61A1-201ENST00000243253 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
SEC61A1-201ENST00000243253 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
SEC61A1-201ENST00000243253 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.16
SEC61A1-201ENST00000243253 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.15
SEC61A1-201ENST00000243253 PDE3BQ13370 1112 aa16.01■□□□□ 0.15
SEC61A1-201ENST00000243253 ERBINQ96RT1 1412 aa16.01■□□□□ 0.15
SEC61A1-201ENST00000243253 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
SEC61A1-201ENST00000243253 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
SEC61A1-201ENST00000243253 DEKP35659 375 aaKnown RBP16■□□□□ 0.15
SEC61A1-201ENST00000243253 SYNMO15061 1565 aa16■□□□□ 0.15
SEC61A1-201ENST00000243253 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
SEC61A1-201ENST00000243253 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
SEC61A1-201ENST00000243253 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
SEC61A1-201ENST00000243253 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
SEC61A1-201ENST00000243253 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
SEC61A1-201ENST00000243253 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
SEC61A1-201ENST00000243253 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
SEC61A1-201ENST00000243253 ABCC1P33527 1531 aa15.98■□□□□ 0.15
SEC61A1-201ENST00000243253 ABCC2Q92887 1545 aa15.98■□□□□ 0.15
SEC61A1-201ENST00000243253 NEURL4Q96JN8 1562 aa15.97■□□□□ 0.15
SEC61A1-201ENST00000243253 TRPM2O94759 1503 aa15.96■□□□□ 0.15
SEC61A1-201ENST00000243253 ZNF521Q96K83 1311 aa15.96■□□□□ 0.15
SEC61A1-201ENST00000243253 BACH2Q9BYV9 841 aa15.96■□□□□ 0.15
SEC61A1-201ENST00000243253 IFT172Q9UG01 1749 aa15.96■□□□□ 0.15
SEC61A1-201ENST00000243253 CLTCL1P53675 1640 aa15.96■□□□□ 0.14
SEC61A1-201ENST00000243253 VWDEQ8N2E2 1590 aa15.96■□□□□ 0.14
SEC61A1-201ENST00000243253 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
SEC61A1-201ENST00000243253 VIRMAQ69YN4 1812 aaKnown RBP15.95■□□□□ 0.14
SEC61A1-201ENST00000243253 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
SEC61A1-201ENST00000243253 NBR1Q14596 966 aa15.94■□□□□ 0.14
SEC61A1-201ENST00000243253 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
SEC61A1-201ENST00000243253 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
SEC61A1-201ENST00000243253 PTPRTO14522 1441 aa15.93■□□□□ 0.14
SEC61A1-201ENST00000243253 MS4A1P11836 297 aa15.92■□□□□ 0.14
SEC61A1-201ENST00000243253 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
SEC61A1-201ENST00000243253 PLEKHH1Q9ULM0 1364 aa15.91■□□□□ 0.14
SEC61A1-201ENST00000243253 PDE4AP27815 886 aa15.91■□□□□ 0.14
SEC61A1-201ENST00000243253 PANK3Q9H999 370 aa15.91■□□□□ 0.14
SEC61A1-201ENST00000243253 ZFYVE16Q7Z3T8 1539 aa15.91■□□□□ 0.14
SEC61A1-201ENST00000243253 TET3O43151 1660 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms