RNA–Protein interactions for RNA: ENST00000242783.10

PKN1-201, Transcript of protein kinase N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKN1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-201ENST00000242783 CDCA7LQ96GN5 454 aa24.77■■□□□ 1.56
PKN1-201ENST00000242783 ANP32AP39687 249 aaKnown RBP24.75■■□□□ 1.55
PKN1-201ENST00000242783 RCAN3Q9UKA8 241 aa24.74■■□□□ 1.55
PKN1-201ENST00000242783 POLR1AO95602 1720 aaPredicted RBP24.74■■□□□ 1.55
PKN1-201ENST00000242783 PLIN1O60240 522 aa24.73■■□□□ 1.55
PKN1-201ENST00000242783 UHRF1BP1Q6BDS2 1440 aa24.73■■□□□ 1.55
PKN1-201ENST00000242783 RRP1P56182 461 aaKnown RBP24.72■■□□□ 1.55
PKN1-201ENST00000242783 CCDC144AA2RUR9 1427 aa24.72■■□□□ 1.55
PKN1-201ENST00000242783 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
PKN1-201ENST00000242783 NLRP13Q86W25 1043 aa24.72■■□□□ 1.55
PKN1-201ENST00000242783 PTPRGP23470 1445 aa24.71■■□□□ 1.55
PKN1-201ENST00000242783 KTN1Q86UP2 1357 aaKnown RBP24.71■■□□□ 1.55
PKN1-201ENST00000242783 BRD4O60885 1362 aaPredicted RBP24.7■■□□□ 1.55
PKN1-201ENST00000242783 ABCC10Q5T3U5 1492 aa24.69■■□□□ 1.54
PKN1-201ENST00000242783 PANK3Q9H999 370 aa24.69■■□□□ 1.54
PKN1-201ENST00000242783 CDC42BPAQ5VT25 1732 aa24.67■■□□□ 1.54
PKN1-201ENST00000242783 CROCC2H7BZ55 1655 aa24.67■■□□□ 1.54
PKN1-201ENST00000242783 NUP160Q12769 1436 aa24.66■■□□□ 1.54
PKN1-201ENST00000242783 SKAP1Q86WV1 359 aa24.66■■□□□ 1.54
PKN1-201ENST00000242783 DEKP35659 375 aaKnown RBP24.65■■□□□ 1.54
PKN1-201ENST00000242783 LRPPRCP42704 1394 aaKnown RBP24.65■■□□□ 1.54
PKN1-201ENST00000242783 ZBTB47Q9UFB7 747 aaPredicted RBP24.64■■□□□ 1.54
PKN1-201ENST00000242783 ADCY10Q96PN6 1610 aa24.63■■□□□ 1.53
PKN1-201ENST00000242783 IPO9Q96P70 1041 aaKnown RBP24.61■■□□□ 1.53
PKN1-201ENST00000242783 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
PKN1-201ENST00000242783 PER1O15534 1290 aaPredicted RBP24.6■■□□□ 1.53
PKN1-201ENST00000242783 ARHGEF12Q9NZN5 1544 aa24.6■■□□□ 1.53
PKN1-201ENST00000242783 FAM135AQ9P2D6 1515 aa24.6■■□□□ 1.53
PKN1-201ENST00000242783 SHANK2Q9UPX8 1470 aa24.6■■□□□ 1.53
PKN1-201ENST00000242783 CCDC141Q6ZP82 1450 aa24.59■■□□□ 1.53
PKN1-201ENST00000242783 ABCA8O94911 1581 aa24.59■■□□□ 1.53
PKN1-201ENST00000242783 PRAG1Q86YV5 1406 aa24.59■■□□□ 1.53
PKN1-201ENST00000242783 TESK2Q96S53 571 aa24.56■■□□□ 1.52
PKN1-201ENST00000242783 TMF1P82094 1093 aa24.55■■□□□ 1.52
PKN1-201ENST00000242783 PARD3Q8TEW0 1356 aa24.54■■□□□ 1.52
PKN1-201ENST00000242783 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
PKN1-201ENST00000242783 ARHGAP5Q13017 1502 aa24.53■■□□□ 1.52
PKN1-201ENST00000242783 RSPH4AQ5TD94 716 aa24.53■■□□□ 1.52
PKN1-201ENST00000242783 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
PKN1-201ENST00000242783 SYCP2Q9BX26 1530 aa24.52■■□□□ 1.52
PKN1-201ENST00000242783 CRBNQ96SW2 442 aa24.51■■□□□ 1.51
PKN1-201ENST00000242783 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
PKN1-201ENST00000242783 PLA2R1Q13018 1463 aa24.51■■□□□ 1.51
PKN1-201ENST00000242783 RTL5Q5HYW3 569 aaPredicted RBP24.5■■□□□ 1.51
PKN1-201ENST00000242783 PDE4AP27815 886 aa24.5■■□□□ 1.51
PKN1-201ENST00000242783 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
PKN1-201ENST00000242783 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
PKN1-201ENST00000242783 A2MP01023 1474 aa24.5■■□□□ 1.51
PKN1-201ENST00000242783 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
PKN1-201ENST00000242783 PDE3BQ13370 1112 aa24.48■■□□□ 1.51
PKN1-201ENST00000242783 C20orf194Q5TEA3 1177 aa24.48■■□□□ 1.51
PKN1-201ENST00000242783 KNSTRNQ9Y448 316 aa24.48■■□□□ 1.51
PKN1-201ENST00000242783 ERBINQ96RT1 1412 aa24.47■■□□□ 1.51
PKN1-201ENST00000242783 WDR43Q15061 677 aaKnown RBP eCLIP24.46■■□□□ 1.51
PKN1-201ENST00000242783 TCERG1O14776 1098 aaKnown RBP24.44■■□□□ 1.5
PKN1-201ENST00000242783 CCDC146Q8IYE0 955 aa24.42■■□□□ 1.5
PKN1-201ENST00000242783 AFAP1Q8N556 730 aa24.41■■□□□ 1.5
PKN1-201ENST00000242783 ARHGEF5Q12774 1597 aa24.41■■□□□ 1.5
PKN1-201ENST00000242783 CDC42BPBQ9Y5S2 1711 aa24.4■■□□□ 1.5
PKN1-201ENST00000242783 COL17A1Q9UMD9 1497 aaPredicted RBP24.39■■□□□ 1.49
PKN1-201ENST00000242783 TRPM1Q7Z4N2 1603 aa24.38■■□□□ 1.49
PKN1-201ENST00000242783 BACH2Q9BYV9 841 aa24.37■■□□□ 1.49
PKN1-201ENST00000242783 PPP2R1AP30153 589 aa24.37■■□□□ 1.49
PKN1-201ENST00000242783 GPRASP1Q5JY77 1395 aa24.36■■□□□ 1.49
PKN1-201ENST00000242783 TTC37Q6PGP7 1564 aa24.36■■□□□ 1.49
PKN1-201ENST00000242783 EFCAB2Q5VUJ9 269 aa24.36■■□□□ 1.49
PKN1-201ENST00000242783 WASHC2CQ9Y4E1 1318 aa24.33■■□□□ 1.49
PKN1-201ENST00000242783 E9PCH4 1651 aa24.33■■□□□ 1.49
PKN1-201ENST00000242783 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
PKN1-201ENST00000242783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.32■■□□□ 1.482e-7■□□□□ 10.2
PKN1-201ENST00000242783 SLC4A3P48751 1232 aa24.31■■□□□ 1.48
PKN1-201ENST00000242783 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
PKN1-201ENST00000242783 NEFMP07197 916 aa24.3■■□□□ 1.48
PKN1-201ENST00000242783 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
PKN1-201ENST00000242783 RGS3P49796 1198 aa24.29■■□□□ 1.48
PKN1-201ENST00000242783 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
PKN1-201ENST00000242783 MAGI2Q86UL8 1455 aa24.27■■□□□ 1.48
PKN1-201ENST00000242783 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
PKN1-201ENST00000242783 TRAPPC8Q9Y2L5 1435 aa24.27■■□□□ 1.48
PKN1-201ENST00000242783 AMER1Q5JTC6 1135 aaPredicted RBP24.27■■□□□ 1.48
PKN1-201ENST00000242783 APAF1O14727 1248 aa24.26■■□□□ 1.47
PKN1-201ENST00000242783 PRDM15P57071 1507 aaPredicted RBP24.26■■□□□ 1.47
PKN1-201ENST00000242783 TNNT2P45379 298 aaPredicted RBP24.26■■□□□ 1.47
PKN1-201ENST00000242783 DUSP27Q5VZP5 1158 aa24.26■■□□□ 1.47
PKN1-201ENST00000242783 CHGAP10645 457 aaKnown RBP24.25■■□□□ 1.47
PKN1-201ENST00000242783 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
PKN1-201ENST00000242783 KIF3BO15066 747 aa24.25■■□□□ 1.47
PKN1-201ENST00000242783 MS4A1P11836 297 aa24.25■■□□□ 1.47
PKN1-201ENST00000242783 CFAP70Q5T0N1 1121 aa24.24■■□□□ 1.47
PKN1-201ENST00000242783 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
PKN1-201ENST00000242783 NEUROD2Q15784 382 aa24.22■■□□□ 1.47
PKN1-201ENST00000242783 SPINK5Q9NQ38 1064 aaPredicted RBP24.22■■□□□ 1.47
PKN1-201ENST00000242783 CDCA8Q53HL2 280 aa24.21■■□□□ 1.47
PKN1-201ENST00000242783 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.46
PKN1-201ENST00000242783 UNC13BO14795 1591 aa24.19■■□□□ 1.46
PKN1-201ENST00000242783 BCAR3O75815 825 aa24.19■■□□□ 1.46
PKN1-201ENST00000242783 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
PKN1-201ENST00000242783 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
PKN1-201ENST00000242783 MYO5CQ9NQX4 1742 aa24.17■■□□□ 1.46
PKN1-201ENST00000242783 PLCH2O75038 1416 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms