RNA–Protein interactions for RNA: ENST00000242783.10

PKN1-201, Transcript of protein kinase N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKN1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-201ENST00000242783 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
PKN1-201ENST00000242783 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
PKN1-201ENST00000242783 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
PKN1-201ENST00000242783 DCAF8L2P0C7V8 631 aa31.84■■■□□ 2.69
PKN1-201ENST00000242783 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
PKN1-201ENST00000242783 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
PKN1-201ENST00000242783 CHIC1Q5VXU3 224 aa31.07■■■□□ 2.56
PKN1-201ENST00000242783 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
PKN1-201ENST00000242783 PCGF6Q9BYE7 350 aa30.66■■■□□ 2.5
PKN1-201ENST00000242783 HRCP23327 699 aa30.48■■■□□ 2.47
PKN1-201ENST00000242783 LOC105371045A0A1W2PR82 267 aa30.47■■■□□ 2.47
PKN1-201ENST00000242783 PPARGC1BQ86YN6 1023 aaKnown RBP30.2■■■□□ 2.43
PKN1-201ENST00000242783 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
PKN1-201ENST00000242783 EHMT2Q96KQ7 1210 aa29.94■■■□□ 2.38
PKN1-201ENST00000242783 FAM9AQ8IZU1 332 aaPredicted RBP29.91■■■□□ 2.38
PKN1-201ENST00000242783 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
PKN1-201ENST00000242783 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
PKN1-201ENST00000242783 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
PKN1-201ENST00000242783 TRIM26Q12899 539 aaPredicted RBP29.68■■■□□ 2.34
PKN1-201ENST00000242783 ABCC9O60706 1549 aa29.66■■■□□ 2.34
PKN1-201ENST00000242783 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
PKN1-201ENST00000242783 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
PKN1-201ENST00000242783 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
PKN1-201ENST00000242783 ZEB1P37275 1124 aaPredicted RBP28.99■■■□□ 2.23
PKN1-201ENST00000242783 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
PKN1-201ENST00000242783 NACADO15069 1562 aa28.93■■■□□ 2.22
PKN1-201ENST00000242783 WIZO95785 1651 aa28.93■■■□□ 2.22
PKN1-201ENST00000242783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.78■■■□□ 2.2
PKN1-201ENST00000242783 CCER1Q8TC90 406 aaPredicted RBP28.67■■■□□ 2.18
PKN1-201ENST00000242783 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
PKN1-201ENST00000242783 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.15
PKN1-201ENST00000242783 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
PKN1-201ENST00000242783 CCDC88BA6NC98 1476 aa28.47■■■□□ 2.15
PKN1-201ENST00000242783 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
PKN1-201ENST00000242783 SOGA1O94964 1423 aa28.37■■■□□ 2.13
PKN1-201ENST00000242783 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
PKN1-201ENST00000242783 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
PKN1-201ENST00000242783 EIF4G1Q04637 1599 aaKnown RBP28.27■■■□□ 2.12
PKN1-201ENST00000242783 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
PKN1-201ENST00000242783 CSRNP3Q8WYN3 585 aa28.26■■■□□ 2.11
PKN1-201ENST00000242783 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
PKN1-201ENST00000242783 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
PKN1-201ENST00000242783 RANGAP1P46060 587 aaPredicted RBP28.22■■■□□ 2.11
PKN1-201ENST00000242783 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
PKN1-201ENST00000242783 DIEXFQ68CQ4 756 aaKnown RBP28.12■■■□□ 2.09
PKN1-201ENST00000242783 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
PKN1-201ENST00000242783 HNRNPUL2Q1KMD3 747 aaKnown RBP28.05■■■□□ 2.08
PKN1-201ENST00000242783 NEUROD1Q13562 356 aa28.01■■■□□ 2.07
PKN1-201ENST00000242783 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.078e-8■■■■■ 37.6
PKN1-201ENST00000242783 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
PKN1-201ENST00000242783 ACIN1Q9UKV3 1341 aaKnown RBP27.93■■■□□ 2.06
PKN1-201ENST00000242783 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
PKN1-201ENST00000242783 EEA1Q15075 1411 aa27.86■■■□□ 2.05
PKN1-201ENST00000242783 YTHDC1Q96MU7 727 aaKnown RBP27.83■■■□□ 2.05
PKN1-201ENST00000242783 APLP2Q06481 763 aa27.82■■■□□ 2.04
PKN1-201ENST00000242783 GTF3C3Q9Y5Q9 886 aa27.8■■■□□ 2.04
PKN1-201ENST00000242783 CENPBP07199 599 aaPredicted RBP27.78■■■□□ 2.04
PKN1-201ENST00000242783 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
PKN1-201ENST00000242783 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
PKN1-201ENST00000242783 CLIP1P30622 1438 aa27.72■■■□□ 2.03
PKN1-201ENST00000242783 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
PKN1-201ENST00000242783 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
PKN1-201ENST00000242783 CEP164Q9UPV0 1460 aa27.66■■■□□ 2.02
PKN1-201ENST00000242783 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
PKN1-201ENST00000242783 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
PKN1-201ENST00000242783 RAPGEF2Q9Y4G8 1499 aa27.59■■■□□ 2.01
PKN1-201ENST00000242783 MIER1Q8N108 512 aa27.52■■■□□ 2
PKN1-201ENST00000242783 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
PKN1-201ENST00000242783 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
PKN1-201ENST00000242783 KIF21BO75037 1637 aa27.4■■□□□ 1.98
PKN1-201ENST00000242783 ITGAEP38570 1179 aa27.37■■□□□ 1.97
PKN1-201ENST00000242783 KANK4Q5T7N3 995 aaPredicted RBP27.34■■□□□ 1.97
PKN1-201ENST00000242783 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
PKN1-201ENST00000242783 ARAP1Q96P48 1450 aa27.08■■□□□ 1.93
PKN1-201ENST00000242783 DHX57Q6P158 1386 aaKnown RBP27.08■■□□□ 1.92
PKN1-201ENST00000242783 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
PKN1-201ENST00000242783 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
PKN1-201ENST00000242783 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
PKN1-201ENST00000242783 CUX1P39880 1505 aa27.01■■□□□ 1.91
PKN1-201ENST00000242783 P3H3Q8IVL6 736 aa26.98■■□□□ 1.91
PKN1-201ENST00000242783 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
PKN1-201ENST00000242783 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
PKN1-201ENST00000242783 NCAPD3P42695 1498 aa26.89■■□□□ 1.9
PKN1-201ENST00000242783 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.9
PKN1-201ENST00000242783 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
PKN1-201ENST00000242783 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
PKN1-201ENST00000242783 ARHGAP35Q9NRY4 1499 aa26.85■■□□□ 1.89
PKN1-201ENST00000242783 CUX2O14529 1486 aa26.85■■□□□ 1.89
PKN1-201ENST00000242783 CFTRP13569 1480 aa26.79■■□□□ 1.88
PKN1-201ENST00000242783 RRBP1Q9P2E9 1410 aaKnown RBP26.78■■□□□ 1.88
PKN1-201ENST00000242783 IGF1RP08069 1367 aa26.76■■□□□ 1.87
PKN1-201ENST00000242783 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
PKN1-201ENST00000242783 RAB3GAP2Q9H2M9 1393 aa26.74■■□□□ 1.87
PKN1-201ENST00000242783 KCNH8Q96L42 1107 aa26.73■■□□□ 1.87
PKN1-201ENST00000242783 SIN3AQ96ST3 1273 aa26.72■■□□□ 1.87
PKN1-201ENST00000242783 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
PKN1-201ENST00000242783 HIRIP3Q9BW71 556 aaPredicted RBP26.68■■□□□ 1.86
PKN1-201ENST00000242783 DDX10Q13206 875 aaKnown RBP26.62■■□□□ 1.85
PKN1-201ENST00000242783 SUPT16HQ9Y5B9 1047 aaKnown RBP26.6■■□□□ 1.85
PKN1-201ENST00000242783 PHLDB1Q86UU1 1377 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms