RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
STAG1-201ENST00000236698 SSR1P43307 286 aaKnown RBP8.79□□□□□ -1
STAG1-201ENST00000236698 CFDP1Q9UEE9 299 aaPredicted RBP8.79□□□□□ -1
STAG1-201ENST00000236698 ANKRD62A6NC57 917 aa8.78□□□□□ -1
STAG1-201ENST00000236698 ZNF692Q9BU19 519 aaPredicted RBP8.78□□□□□ -1
STAG1-201ENST00000236698 RRP9O43818 475 aaKnown RBP8.78□□□□□ -1
STAG1-201ENST00000236698 EXOC8Q8IYI6 725 aa8.77□□□□□ -1.01
STAG1-201ENST00000236698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.77□□□□□ -1.01
STAG1-201ENST00000236698 ARID4AP29374 1257 aaPredicted RBP8.77□□□□□ -1.01
STAG1-201ENST00000236698 RBM27Q9P2N5 1060 aaKnown RBP8.77□□□□□ -1.01
STAG1-201ENST00000236698 HDAC5Q9UQL6 1122 aa8.77□□□□□ -1.01
STAG1-201ENST00000236698 CCER2I3L3R5 266 aa8.77□□□□□ -1.01
STAG1-201ENST00000236698 STK11IPQ8N1F8 1099 aa8.77□□□□□ -1.01
STAG1-201ENST00000236698 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
STAG1-201ENST00000236698 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
STAG1-201ENST00000236698 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
STAG1-201ENST00000236698 RUSC2Q8N2Y8 1516 aa8.75□□□□□ -1.01
STAG1-201ENST00000236698 SH3BP5O60239 455 aa8.75□□□□□ -1.01
STAG1-201ENST00000236698 CCDC18Q5T9S5 1454 aa8.75□□□□□ -1.01
STAG1-201ENST00000236698 ZNF777Q9ULD5 760 aaPredicted RBP8.75□□□□□ -1.01
STAG1-201ENST00000236698 CDCA8Q53HL2 280 aa8.74□□□□□ -1.01
STAG1-201ENST00000236698 FAM43BQ6ZT52 329 aaPredicted RBP8.74□□□□□ -1.01
STAG1-201ENST00000236698 ERCC6Q03468 1493 aa8.74□□□□□ -1.01
STAG1-201ENST00000236698 TDRD9Q8NDG6 1382 aaKnown RBP8.74□□□□□ -1.01
STAG1-201ENST00000236698 SOX12O15370 315 aa8.74□□□□□ -1.01
STAG1-201ENST00000236698 PNNQ9H307 717 aaKnown RBP8.74□□□□□ -1.01
STAG1-201ENST00000236698 DDX10Q13206 875 aaKnown RBP8.73□□□□□ -1.01
STAG1-201ENST00000236698 MAPK8IP2Q13387 824 aaPredicted RBP8.73□□□□□ -1.01
STAG1-201ENST00000236698 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
STAG1-201ENST00000236698 ARMCX6Q7L4S7 300 aa8.73□□□□□ -1.01
STAG1-201ENST00000236698 PEX14O75381 377 aa8.72□□□□□ -1.01
STAG1-201ENST00000236698 DDRGK1Q96HY6 314 aa8.72□□□□□ -1.01
STAG1-201ENST00000236698 RAB3GAP2Q9H2M9 1393 aa8.72□□□□□ -1.01
STAG1-201ENST00000236698 SYNJ1O43426 1573 aa8.72□□□□□ -1.01
STAG1-201ENST00000236698 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
STAG1-201ENST00000236698 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
STAG1-201ENST00000236698 MIER1Q8N108 512 aa8.72□□□□□ -1.01
STAG1-201ENST00000236698 GAPVD1Q14C86 1478 aa8.72□□□□□ -1.01
STAG1-201ENST00000236698 CHAF1AQ13111 956 aaPredicted RBP8.71□□□□□ -1.01
STAG1-201ENST00000236698 TAF3Q5VWG9 929 aa8.71□□□□□ -1.01
STAG1-201ENST00000236698 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.01
STAG1-201ENST00000236698 SLC24A3Q9HC58 644 aa8.71□□□□□ -1.02
STAG1-201ENST00000236698 CREBRFQ8IUR6 639 aa8.7□□□□□ -1.02
STAG1-201ENST00000236698 DHX57Q6P158 1386 aaKnown RBP8.7□□□□□ -1.02
STAG1-201ENST00000236698 PPP1R15AO75807 674 aaPredicted RBP8.7□□□□□ -1.02
STAG1-201ENST00000236698 POLD1P28340 1107 aa8.7□□□□□ -1.02
STAG1-201ENST00000236698 GOLGA6L1Q8N7Z2 621 aa8.7□□□□□ -1.02
STAG1-201ENST00000236698 CUX1P39880 1505 aa8.7□□□□□ -1.02
STAG1-201ENST00000236698 C1orf115Q9H7X2 142 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 MARCH6O60337 910 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 TNNT3P45378 269 aaPredicted RBP8.69□□□□□ -1.02
STAG1-201ENST00000236698 FYCO1Q9BQS8 1478 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 MAFGO15525 162 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 BECN1Q14457 450 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 KRI1Q8N9T8 703 aaKnown RBP8.69□□□□□ -1.02
STAG1-201ENST00000236698 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
STAG1-201ENST00000236698 SPTY2D1Q68D10 685 aaPredicted RBP8.69□□□□□ -1.02
STAG1-201ENST00000236698 GOLGA6L4A6NEF3 574 aa8.68□□□□□ -1.02
STAG1-201ENST00000236698 AQRO60306 1485 aaKnown RBP eCLIP8.68□□□□□ -1.02
STAG1-201ENST00000236698 KIAA2012Q0VF49 1180 aa8.68□□□□□ -1.02
STAG1-201ENST00000236698 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
STAG1-201ENST00000236698 CIZ1Q9ULV3 898 aaPredicted RBP8.68□□□□□ -1.02
STAG1-201ENST00000236698 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.68□□□□□ -1.02
STAG1-201ENST00000236698 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
STAG1-201ENST00000236698 ABCA10Q8WWZ4 1543 aa8.68□□□□□ -1.02
STAG1-201ENST00000236698 LMOD3Q0VAK6 560 aa8.67□□□□□ -1.02
STAG1-201ENST00000236698 TPD52L2O43399 206 aaKnown RBP8.67□□□□□ -1.02
STAG1-201ENST00000236698 FHOD3Q2V2M9 1422 aa8.67□□□□□ -1.02
STAG1-201ENST00000236698 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
STAG1-201ENST00000236698 ISY1Q9ULR0 285 aaKnown RBP8.66□□□□□ -1.02
STAG1-201ENST00000236698 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
STAG1-201ENST00000236698 TCERG1O14776 1098 aaKnown RBP8.66□□□□□ -1.02
STAG1-201ENST00000236698 CCDC181Q5TID7 509 aa8.66□□□□□ -1.02
STAG1-201ENST00000236698 LRRC9Q6ZRR7 1453 aa8.66□□□□□ -1.02
STAG1-201ENST00000236698 GRIN2BQ13224 1484 aa8.66□□□□□ -1.02
STAG1-201ENST00000236698 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
STAG1-201ENST00000236698 ZBTB12Q9Y330 459 aaPredicted RBP8.66□□□□□ -1.02
STAG1-201ENST00000236698 LAMC3Q9Y6N6 1575 aa8.65□□□□□ -1.02
STAG1-201ENST00000236698 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
STAG1-201ENST00000236698 PAIP2Q9BPZ3 127 aaKnown RBP8.65□□□□□ -1.02
STAG1-201ENST00000236698 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
STAG1-201ENST00000236698 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
STAG1-201ENST00000236698 TOPBP1Q92547 1522 aa8.65□□□□□ -1.03
STAG1-201ENST00000236698 MYOM3Q5VTT5 1437 aa8.65□□□□□ -1.03
STAG1-201ENST00000236698 MIA2Q96PC5 1412 aa8.65□□□□□ -1.03
STAG1-201ENST00000236698 ROCK2O75116 1388 aaKnown RBP8.65□□□□□ -1.03
STAG1-201ENST00000236698 PAF1Q8N7H5 531 aa8.65□□□□□ -1.03
STAG1-201ENST00000236698 FGD6Q6ZV73 1430 aa8.64□□□□□ -1.03
STAG1-201ENST00000236698 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
STAG1-201ENST00000236698 TMTC2Q8N394 836 aa8.64□□□□□ -1.03
STAG1-201ENST00000236698 EFCAB2Q5VUJ9 269 aa8.64□□□□□ -1.03
STAG1-201ENST00000236698 PKD2Q13563 968 aa8.63□□□□□ -1.03
STAG1-201ENST00000236698 UACAQ9BZF9 1416 aa8.63□□□□□ -1.03
STAG1-201ENST00000236698 RALBP1Q15311 655 aa8.63□□□□□ -1.03
STAG1-201ENST00000236698 GOLIM4O00461 696 aa8.63□□□□□ -1.03
STAG1-201ENST00000236698 JPH4Q96JJ6 628 aa8.63□□□□□ -1.03
STAG1-201ENST00000236698 BIVM-ERCC5R4GMW8 1640 aa8.63□□□□□ -1.03
STAG1-201ENST00000236698 BRD1O95696 1058 aa8.62□□□□□ -1.03
STAG1-201ENST00000236698 POLA1P09884 1462 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms