RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 RTEL1-TNFRSF6BF6WH68 1400 aa27.41■■□□□ 1.98
RTKN-201ENST00000233330 FANCAO15360 1455 aa27.39■■□□□ 1.97
RTKN-201ENST00000233330 SPAG9O60271 1321 aaKnown RBP27.38■■□□□ 1.97
RTKN-201ENST00000233330 DCAF11Q8TEB1 546 aa27.37■■□□□ 1.97
RTKN-201ENST00000233330 ASXL2Q76L83 1435 aa27.37■■□□□ 1.97
RTKN-201ENST00000233330 ATP10AO60312 1499 aa27.36■■□□□ 1.97
RTKN-201ENST00000233330 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
RTKN-201ENST00000233330 INO80Q9ULG1 1556 aaPredicted RBP27.35■■□□□ 1.97
RTKN-201ENST00000233330 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
RTKN-201ENST00000233330 KDM2AQ9Y2K7 1162 aa27.35■■□□□ 1.97
RTKN-201ENST00000233330 TRPM1Q7Z4N2 1603 aa27.32■■□□□ 1.96
RTKN-201ENST00000233330 CARD11Q9BXL7 1154 aa27.32■■□□□ 1.96
RTKN-201ENST00000233330 DEPDC5O75140 1603 aa27.31■■□□□ 1.96
RTKN-201ENST00000233330 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
RTKN-201ENST00000233330 PRKRIP1Q9H875 184 aaPredicted RBP27.31■■□□□ 1.96
RTKN-201ENST00000233330 PRAG1Q86YV5 1406 aa27.3■■□□□ 1.96
RTKN-201ENST00000233330 ARID4BQ4LE39 1312 aaPredicted RBP27.3■■□□□ 1.96
RTKN-201ENST00000233330 ADGRL1O94910 1474 aa27.29■■□□□ 1.96
RTKN-201ENST00000233330 A2MP01023 1474 aa27.29■■□□□ 1.96
RTKN-201ENST00000233330 SUPT16HQ9Y5B9 1047 aaKnown RBP27.28■■□□□ 1.96
RTKN-201ENST00000233330 E9PCH4 1651 aa27.28■■□□□ 1.96
RTKN-201ENST00000233330 ROCK2O75116 1388 aaKnown RBP27.25■■□□□ 1.95
RTKN-201ENST00000233330 SCAPERQ9BY12 1400 aa27.24■■□□□ 1.95
RTKN-201ENST00000233330 RGL3Q3MIN7 710 aa27.22■■□□□ 1.95
RTKN-201ENST00000233330 DHX29Q7Z478 1369 aaKnown RBP27.21■■□□□ 1.95
RTKN-201ENST00000233330 LAMC1P11047 1609 aa27.21■■□□□ 1.95
RTKN-201ENST00000233330 EIF2AK4Q9P2K8 1649 aaKnown RBP27.2■■□□□ 1.95
RTKN-201ENST00000233330 TET3O43151 1660 aa27.19■■□□□ 1.94
RTKN-201ENST00000233330 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
RTKN-201ENST00000233330 CCDC184Q52MB2 194 aa27.19■■□□□ 1.94
RTKN-201ENST00000233330 SPHKAPQ2M3C7 1700 aa27.19■■□□□ 1.94
RTKN-201ENST00000233330 VWDEQ8N2E2 1590 aa27.18■■□□□ 1.94
RTKN-201ENST00000233330 TRPM2O94759 1503 aa27.18■■□□□ 1.94
RTKN-201ENST00000233330 NPM1P06748 294 aaKnown RBP eCLIP27.18■■□□□ 1.94
RTKN-201ENST00000233330 GPRASP1Q5JY77 1395 aa27.18■■□□□ 1.94
RTKN-201ENST00000233330 POLR3GLQ9BT43 218 aa27.16■■□□□ 1.94
RTKN-201ENST00000233330 KIDINS220Q9ULH0 1771 aa27.15■■□□□ 1.94
RTKN-201ENST00000233330 CEP152O94986 1710 aa27.15■■□□□ 1.94
RTKN-201ENST00000233330 HNRNPUQ00839 825 aaKnown RBP eCLIP27.14■■□□□ 1.94
RTKN-201ENST00000233330 PRDM15P57071 1507 aaPredicted RBP27.14■■□□□ 1.93
RTKN-201ENST00000233330 CFAP74Q9C0B2 1584 aa27.13■■□□□ 1.93
RTKN-201ENST00000233330 PTPRTO14522 1441 aa27.13■■□□□ 1.93
RTKN-201ENST00000233330 MROH1Q8NDA8 1641 aa27.13■■□□□ 1.93
RTKN-201ENST00000233330 PELP1Q8IZL8 1130 aaKnown RBP27.12■■□□□ 1.93
RTKN-201ENST00000233330 ZNF518AQ6AHZ1 1483 aa27.11■■□□□ 1.93
RTKN-201ENST00000233330 NBPF1Q3BBV0 1214 aa27.11■■□□□ 1.93
RTKN-201ENST00000233330 MRS2Q9HD23 443 aa27.11■■□□□ 1.93
RTKN-201ENST00000233330 KANK1Q14678 1352 aa27.1■■□□□ 1.93
RTKN-201ENST00000233330 CLTCL1P53675 1640 aa27.09■■□□□ 1.93
RTKN-201ENST00000233330 RNF17Q9BXT8 1623 aaKnown RBP27.09■■□□□ 1.93
RTKN-201ENST00000233330 MYT1LQ9UL68 1186 aa27.09■■□□□ 1.93
RTKN-201ENST00000233330 CD109Q6YHK3 1445 aa27.08■■□□□ 1.93
RTKN-201ENST00000233330 KIF3BO15066 747 aa27.07■■□□□ 1.92
RTKN-201ENST00000233330 MADDQ8WXG6 1647 aa27.05■■□□□ 1.92
RTKN-201ENST00000233330 POGZQ7Z3K3 1410 aa27.02■■□□□ 1.92
RTKN-201ENST00000233330 FAM9BQ8IZU0 186 aa27.02■■□□□ 1.92
RTKN-201ENST00000233330 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
RTKN-201ENST00000233330 EFCAB6Q5THR3 1501 aa26.99■■□□□ 1.91
RTKN-201ENST00000233330 NEURL4Q96JN8 1562 aa26.99■■□□□ 1.91
RTKN-201ENST00000233330 FKBP8Q14318 412 aa26.98■■□□□ 1.91
RTKN-201ENST00000233330 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
RTKN-201ENST00000233330 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
RTKN-201ENST00000233330 PPRC1Q5VV67 1664 aaKnown RBP26.96■■□□□ 1.91
RTKN-201ENST00000233330 LMTK2Q8IWU2 1503 aa26.96■■□□□ 1.91
RTKN-201ENST00000233330 TESK2Q96S53 571 aa26.96■■□□□ 1.91
RTKN-201ENST00000233330 IQGAP1P46940 1657 aa26.95■■□□□ 1.9
RTKN-201ENST00000233330 STAC3Q96MF2 364 aa26.94■■□□□ 1.9
RTKN-201ENST00000233330 FRMPD1Q5SYB0 1578 aa26.94■■□□□ 1.9
RTKN-201ENST00000233330 NEFLP07196 543 aa26.94■■□□□ 1.9
RTKN-201ENST00000233330 CNGB1Q14028 1251 aaPredicted RBP26.93■■□□□ 1.9
RTKN-201ENST00000233330 KTN1Q86UP2 1357 aaKnown RBP26.92■■□□□ 1.9
RTKN-201ENST00000233330 NEO1Q92859 1461 aa26.92■■□□□ 1.9
RTKN-201ENST00000233330 KIF1BO60333 1816 aa26.91■■□□□ 1.9
RTKN-201ENST00000233330 ZBED9Q6R2W3 1325 aa26.91■■□□□ 1.9
RTKN-201ENST00000233330 DISP3Q9P2K9 1392 aa26.91■■□□□ 1.9
RTKN-201ENST00000233330 UGGT1Q9NYU2 1555 aa26.9■■□□□ 1.9
RTKN-201ENST00000233330 ABCA6Q8N139 1617 aa26.9■■□□□ 1.9
RTKN-201ENST00000233330 KIAA1210Q9ULL0 1709 aa26.89■■□□□ 1.89
RTKN-201ENST00000233330 IFT172Q9UG01 1749 aa26.86■■□□□ 1.89
RTKN-201ENST00000233330 RALBP1Q15311 655 aa26.85■■□□□ 1.89
RTKN-201ENST00000233330 TMF1P82094 1093 aa26.84■■□□□ 1.89
RTKN-201ENST00000233330 BCANQ96GW7 911 aa26.84■■□□□ 1.89
RTKN-201ENST00000233330 MROH2AA6NES4 1674 aa26.84■■□□□ 1.89
RTKN-201ENST00000233330 MAP3K4Q9Y6R4 1608 aa26.84■■□□□ 1.89
RTKN-201ENST00000233330 MYOM2P54296 1465 aa26.83■■□□□ 1.89
RTKN-201ENST00000233330 MYBBP1AQ9BQG0 1328 aaKnown RBP26.83■■□□□ 1.88
RTKN-201ENST00000233330 SCAF11Q99590 1463 aaKnown RBP26.82■■□□□ 1.88
RTKN-201ENST00000233330 PER1O15534 1290 aaPredicted RBP26.81■■□□□ 1.88
RTKN-201ENST00000233330 RICTORQ6R327 1708 aa26.8■■□□□ 1.88
RTKN-201ENST00000233330 BRD4O60885 1362 aaPredicted RBP26.8■■□□□ 1.88
RTKN-201ENST00000233330 TMC1Q8TDI8 760 aa26.8■■□□□ 1.88
RTKN-201ENST00000233330 PNISRQ8TF01 805 aaKnown RBP26.8■■□□□ 1.88
RTKN-201ENST00000233330 PARD3Q8TEW0 1356 aa26.79■■□□□ 1.88
RTKN-201ENST00000233330 DIP2CQ9Y2E4 1556 aa26.78■■□□□ 1.88
RTKN-201ENST00000233330 NPATQ14207 1427 aa26.77■■□□□ 1.88
RTKN-201ENST00000233330 ADGRB3O60242 1522 aa26.77■■□□□ 1.88
RTKN-201ENST00000233330 RAPGEF3O95398 923 aa26.76■■□□□ 1.87
RTKN-201ENST00000233330 ABCC3O15438 1527 aa26.76■■□□□ 1.87
RTKN-201ENST00000233330 WASHC2CQ9Y4E1 1318 aa26.75■■□□□ 1.87
RTKN-201ENST00000233330 CFAP65Q6ZU64 1925 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms