RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ATP10BO94823 1461 aa18.85■□□□□ 0.61
SF1-201ENST00000227503 KDM5CP41229 1560 aa18.84■□□□□ 0.61
SF1-201ENST00000227503 PDE4AP27815 886 aa18.84■□□□□ 0.61
SF1-201ENST00000227503 UBE2Q2Q8WVN8 375 aa18.84■□□□□ 0.61
SF1-201ENST00000227503 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
SF1-201ENST00000227503 PLEKHD1A6NEE1 506 aa18.83■□□□□ 0.61
SF1-201ENST00000227503 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
SF1-201ENST00000227503 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
SF1-201ENST00000227503 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
SF1-201ENST00000227503 NUP155O75694 1391 aa18.81■□□□□ 0.6
SF1-201ENST00000227503 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
SF1-201ENST00000227503 KDM5DQ9BY66 1539 aa18.81■□□□□ 0.6
SF1-201ENST00000227503 RALGAPBQ86X10 1494 aa18.8■□□□□ 0.6
SF1-201ENST00000227503 WASHC2CQ9Y4E1 1318 aa18.8■□□□□ 0.6
SF1-201ENST00000227503 ARHGEF12Q9NZN5 1544 aa18.78■□□□□ 0.6
SF1-201ENST00000227503 PTPRGP23470 1445 aa18.77■□□□□ 0.6
SF1-201ENST00000227503 BACH2Q9BYV9 841 aa18.75■□□□□ 0.59
SF1-201ENST00000227503 FRAT1Q92837 279 aaPredicted RBP18.75■□□□□ 0.59
SF1-201ENST00000227503 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
SF1-201ENST00000227503 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
SF1-201ENST00000227503 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
SF1-201ENST00000227503 GSE1Q14687 1217 aa18.74■□□□□ 0.59
SF1-201ENST00000227503 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
SF1-201ENST00000227503 USP35Q9P2H5 1018 aa18.73■□□□□ 0.59
SF1-201ENST00000227503 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
SF1-201ENST00000227503 HNRNPMP52272 730 aaKnown RBP eCLIP18.73■□□□□ 0.59
SF1-201ENST00000227503 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
SF1-201ENST00000227503 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
SF1-201ENST00000227503 TCERG1O14776 1098 aaKnown RBP18.71■□□□□ 0.59
SF1-201ENST00000227503 PPM1GO15355 546 aaPredicted RBP18.71■□□□□ 0.59
SF1-201ENST00000227503 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
SF1-201ENST00000227503 PLIN1O60240 522 aa18.7■□□□□ 0.58
SF1-201ENST00000227503 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
SF1-201ENST00000227503 PNISRQ8TF01 805 aaKnown RBP18.68■□□□□ 0.58
SF1-201ENST00000227503 SAMD9LQ8IVG5 1584 aa18.68■□□□□ 0.58
SF1-201ENST00000227503 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
SF1-201ENST00000227503 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
SF1-201ENST00000227503 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
SF1-201ENST00000227503 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
SF1-201ENST00000227503 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
SF1-201ENST00000227503 FAM135AQ9P2D6 1515 aa18.65■□□□□ 0.58
SF1-201ENST00000227503 PREX2Q70Z35 1606 aa18.65■□□□□ 0.58
SF1-201ENST00000227503 RCAN3Q9UKA8 241 aa18.64■□□□□ 0.57
SF1-201ENST00000227503 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
SF1-201ENST00000227503 E9PCH4 1651 aa18.62■□□□□ 0.57
SF1-201ENST00000227503 CDCA7LQ96GN5 454 aa18.61■□□□□ 0.57
SF1-201ENST00000227503 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
SF1-201ENST00000227503 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
SF1-201ENST00000227503 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
SF1-201ENST00000227503 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
SF1-201ENST00000227503 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
SF1-201ENST00000227503 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
SF1-201ENST00000227503 RALBP1Q15311 655 aa18.58■□□□□ 0.57
SF1-201ENST00000227503 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.57
SF1-201ENST00000227503 PLA2R1Q13018 1463 aa18.58■□□□□ 0.57
SF1-201ENST00000227503 MAST1Q9Y2H9 1570 aa18.58■□□□□ 0.56
SF1-201ENST00000227503 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
SF1-201ENST00000227503 UNC13BO14795 1591 aa18.57■□□□□ 0.56
SF1-201ENST00000227503 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
SF1-201ENST00000227503 CRBNQ96SW2 442 aa18.56■□□□□ 0.56
SF1-201ENST00000227503 DAXXQ9UER7 740 aaPredicted RBP18.56■□□□□ 0.56
SF1-201ENST00000227503 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
SF1-201ENST00000227503 MS4A1P11836 297 aa18.55■□□□□ 0.56
SF1-201ENST00000227503 GPRASP1Q5JY77 1395 aa18.54■□□□□ 0.56
SF1-201ENST00000227503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.566e-7■■■□□ 15.3
SF1-201ENST00000227503 DDRGK1Q96HY6 314 aa18.53■□□□□ 0.56
SF1-201ENST00000227503 ARHGAP5Q13017 1502 aa18.53■□□□□ 0.56
SF1-201ENST00000227503 A2MP01023 1474 aa18.53■□□□□ 0.56
SF1-201ENST00000227503 NBPF1Q3BBV0 1214 aa18.52■□□□□ 0.56
SF1-201ENST00000227503 ARXQ96QS3 562 aa18.52■□□□□ 0.56
SF1-201ENST00000227503 PARD3Q8TEW0 1356 aa18.52■□□□□ 0.55
SF1-201ENST00000227503 C20orf194Q5TEA3 1177 aa18.52■□□□□ 0.55
SF1-201ENST00000227503 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
SF1-201ENST00000227503 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SF1-201ENST00000227503 IQGAP3Q86VI3 1631 aa18.5■□□□□ 0.55
SF1-201ENST00000227503 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SF1-201ENST00000227503 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
SF1-201ENST00000227503 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
SF1-201ENST00000227503 LAMC1P11047 1609 aa18.49■□□□□ 0.55
SF1-201ENST00000227503 CHD1O14646 1710 aa18.48■□□□□ 0.55
SF1-201ENST00000227503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.554e-9■■■□□ 19.2
SF1-201ENST00000227503 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
SF1-201ENST00000227503 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
SF1-201ENST00000227503 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
SF1-201ENST00000227503 TESK2Q96S53 571 aa18.47■□□□□ 0.55
SF1-201ENST00000227503 ATP10AO60312 1499 aa18.46■□□□□ 0.55
SF1-201ENST00000227503 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
SF1-201ENST00000227503 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
SF1-201ENST00000227503 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
SF1-201ENST00000227503 RGS3P49796 1198 aa18.45■□□□□ 0.54
SF1-201ENST00000227503 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
SF1-201ENST00000227503 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
SF1-201ENST00000227503 PKNOX2Q96KN3 472 aa18.44■□□□□ 0.54
SF1-201ENST00000227503 RSPH6AQ9H0K4 717 aa18.44■□□□□ 0.54
SF1-201ENST00000227503 POGKQ9P215 609 aa18.44■□□□□ 0.54
SF1-201ENST00000227503 ERCC6L2Q5T890 1561 aa18.43■□□□□ 0.54
SF1-201ENST00000227503 RRAGDQ9NQL2 400 aaPredicted RBP18.43■□□□□ 0.54
SF1-201ENST00000227503 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
SF1-201ENST00000227503 EIF2AK4Q9P2K8 1649 aaKnown RBP18.42■□□□□ 0.54
SF1-201ENST00000227503 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms