RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RALGAPBQ86X10 1494 aa30.73■■■□□ 2.51
CCDC9-201ENST00000221922 BCANQ96GW7 911 aa30.72■■■□□ 2.51
CCDC9-201ENST00000221922 SPAG9O60271 1321 aaKnown RBP30.69■■■□□ 2.5
CCDC9-201ENST00000221922 C11orf95C9JLR9 678 aaPredicted RBP30.69■■■□□ 2.5
CCDC9-201ENST00000221922 INO80Q9ULG1 1556 aaPredicted RBP30.69■■■□□ 2.5
CCDC9-201ENST00000221922 KDM5CP41229 1560 aa30.68■■■□□ 2.5
CCDC9-201ENST00000221922 CCDC144AA2RUR9 1427 aa30.68■■■□□ 2.5
CCDC9-201ENST00000221922 ATP10AO60312 1499 aa30.67■■■□□ 2.5
CCDC9-201ENST00000221922 PLA2R1Q13018 1463 aa30.67■■■□□ 2.5
CCDC9-201ENST00000221922 KIF7Q2M1P5 1343 aa30.65■■■□□ 2.5
CCDC9-201ENST00000221922 ATP7AQ04656 1500 aa30.64■■■□□ 2.5
CCDC9-201ENST00000221922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.64■■■□□ 2.53e-8■■■■□ 26.5
CCDC9-201ENST00000221922 USP47Q96K76 1375 aa30.64■■■□□ 2.49
CCDC9-201ENST00000221922 DEPDC5O75140 1603 aa30.62■■■□□ 2.49
CCDC9-201ENST00000221922 ADGRL1O94910 1474 aa30.62■■■□□ 2.49
CCDC9-201ENST00000221922 AFAP1Q8N556 730 aa30.61■■■□□ 2.49
CCDC9-201ENST00000221922 ZNF326Q5BKZ1 582 aaKnown RBP30.61■■■□□ 2.49
CCDC9-201ENST00000221922 NPM1P06748 294 aaKnown RBP eCLIP30.58■■■□□ 2.49
CCDC9-201ENST00000221922 ARID4BQ4LE39 1312 aaPredicted RBP30.57■■■□□ 2.49
CCDC9-201ENST00000221922 SCAPERQ9BY12 1400 aa30.56■■■□□ 2.48
CCDC9-201ENST00000221922 BCORL1Q5H9F3 1711 aa30.56■■■□□ 2.48
CCDC9-201ENST00000221922 HNRNPUQ00839 825 aaKnown RBP eCLIP30.56■■■□□ 2.48
CCDC9-201ENST00000221922 PRKRIP1Q9H875 184 aaPredicted RBP30.56■■■□□ 2.48
CCDC9-201ENST00000221922 DCAF11Q8TEB1 546 aa30.54■■■□□ 2.48
CCDC9-201ENST00000221922 EIF2AK4Q9P2K8 1649 aaKnown RBP30.54■■■□□ 2.48
CCDC9-201ENST00000221922 CFAP74Q9C0B2 1584 aa30.54■■■□□ 2.48
CCDC9-201ENST00000221922 TRPM1Q7Z4N2 1603 aa30.52■■■□□ 2.48
CCDC9-201ENST00000221922 E9PCH4 1651 aa30.51■■■□□ 2.48
CCDC9-201ENST00000221922 PRAG1Q86YV5 1406 aa30.51■■■□□ 2.48
CCDC9-201ENST00000221922 A2MP01023 1474 aa30.5■■■□□ 2.47
CCDC9-201ENST00000221922 VWDEQ8N2E2 1590 aa30.49■■■□□ 2.47
CCDC9-201ENST00000221922 KDM2AQ9Y2K7 1162 aa30.49■■■□□ 2.47
CCDC9-201ENST00000221922 TET3O43151 1660 aa30.48■■■□□ 2.47
CCDC9-201ENST00000221922 CARD11Q9BXL7 1154 aa30.48■■■□□ 2.47
CCDC9-201ENST00000221922 ZNF518AQ6AHZ1 1483 aa30.46■■■□□ 2.47
CCDC9-201ENST00000221922 ROCK2O75116 1388 aaKnown RBP30.45■■■□□ 2.47
CCDC9-201ENST00000221922 KIDINS220Q9ULH0 1771 aa30.45■■■□□ 2.47
CCDC9-201ENST00000221922 TRPM2O94759 1503 aa30.45■■■□□ 2.46
CCDC9-201ENST00000221922 LAMC1P11047 1609 aa30.45■■■□□ 2.46
CCDC9-201ENST00000221922 PRDM15P57071 1507 aaPredicted RBP30.44■■■□□ 2.46
CCDC9-201ENST00000221922 DHX29Q7Z478 1369 aaKnown RBP30.44■■■□□ 2.46
CCDC9-201ENST00000221922 SPHKAPQ2M3C7 1700 aa30.43■■■□□ 2.46
CCDC9-201ENST00000221922 CD109Q6YHK3 1445 aa30.42■■■□□ 2.46
CCDC9-201ENST00000221922 CCDC184Q52MB2 194 aa30.41■■■□□ 2.46
CCDC9-201ENST00000221922 KANK1Q14678 1352 aa30.4■■■□□ 2.46
CCDC9-201ENST00000221922 PTPRTO14522 1441 aa30.4■■■□□ 2.46
CCDC9-201ENST00000221922 MROH1Q8NDA8 1641 aa30.4■■■□□ 2.46
CCDC9-201ENST00000221922 GPRASP1Q5JY77 1395 aa30.4■■■□□ 2.46
CCDC9-201ENST00000221922 CEP152O94986 1710 aa30.38■■■□□ 2.45
CCDC9-201ENST00000221922 MRS2Q9HD23 443 aa30.37■■■□□ 2.45
CCDC9-201ENST00000221922 RGL3Q3MIN7 710 aa30.37■■■□□ 2.45
CCDC9-201ENST00000221922 POGZQ7Z3K3 1410 aa30.36■■■□□ 2.45
CCDC9-201ENST00000221922 ERICH6BQ5W0A0 696 aa30.32■■■□□ 2.44
CCDC9-201ENST00000221922 CLTCL1P53675 1640 aa30.32■■■□□ 2.44
CCDC9-201ENST00000221922 MLH3Q9UHC1 1453 aa30.31■■■□□ 2.44
CCDC9-201ENST00000221922 KIF3BO15066 747 aa30.31■■■□□ 2.44
CCDC9-201ENST00000221922 MYT1LQ9UL68 1186 aa30.31■■■□□ 2.44
CCDC9-201ENST00000221922 RNF17Q9BXT8 1623 aaKnown RBP30.31■■■□□ 2.44
CCDC9-201ENST00000221922 ST20-MTHFSA0A0A6YYL1 179 aa30.31■■■□□ 2.44
CCDC9-201ENST00000221922 RBM19Q9Y4C8 960 aaKnown RBP30.31■■■□□ 2.44
CCDC9-201ENST00000221922 POLR3GLQ9BT43 218 aa30.3■■■□□ 2.44
CCDC9-201ENST00000221922 NEO1Q92859 1461 aa30.3■■■□□ 2.44
CCDC9-201ENST00000221922 NEURL4Q96JN8 1562 aa30.29■■■□□ 2.44
CCDC9-201ENST00000221922 HECW2Q9P2P5 1572 aa30.29■■■□□ 2.44
CCDC9-201ENST00000221922 ANP32EQ9BTT0 268 aa30.27■■■□□ 2.44
CCDC9-201ENST00000221922 ZBED9Q6R2W3 1325 aa30.27■■■□□ 2.44
CCDC9-201ENST00000221922 LMTK2Q8IWU2 1503 aa30.27■■■□□ 2.44
CCDC9-201ENST00000221922 EFCAB6Q5THR3 1501 aa30.26■■■□□ 2.44
CCDC9-201ENST00000221922 MADDQ8WXG6 1647 aa30.25■■■□□ 2.43
CCDC9-201ENST00000221922 FAM9BQ8IZU0 186 aa30.25■■■□□ 2.43
CCDC9-201ENST00000221922 NBPF1Q3BBV0 1214 aa30.23■■■□□ 2.43
CCDC9-201ENST00000221922 STAC3Q96MF2 364 aa30.23■■■□□ 2.43
CCDC9-201ENST00000221922 FRMPD1Q5SYB0 1578 aa30.22■■■□□ 2.43
CCDC9-201ENST00000221922 PPRC1Q5VV67 1664 aaKnown RBP30.2■■■□□ 2.43
CCDC9-201ENST00000221922 MAP3K4Q9Y6R4 1608 aa30.19■■■□□ 2.42
CCDC9-201ENST00000221922 KTN1Q86UP2 1357 aaKnown RBP30.19■■■□□ 2.42
CCDC9-201ENST00000221922 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
CCDC9-201ENST00000221922 IRX6P78412 446 aaPredicted RBP30.17■■■□□ 2.42
CCDC9-201ENST00000221922 GLI2P10070 1586 aa30.15■■■□□ 2.42
CCDC9-201ENST00000221922 COL17A1Q9UMD9 1497 aaPredicted RBP30.15■■■□□ 2.42
CCDC9-201ENST00000221922 PPP4R2Q9NY27 417 aa30.13■■■□□ 2.41
CCDC9-201ENST00000221922 IQGAP1P46940 1657 aa30.13■■■□□ 2.41
CCDC9-201ENST00000221922 KIF1BO60333 1816 aa30.12■■■□□ 2.41
CCDC9-201ENST00000221922 RIMBP3CA6NJZ7 1639 aa30.11■■■□□ 2.41
CCDC9-201ENST00000221922 RIMBP3BA6NNM3 1639 aa30.11■■■□□ 2.41
CCDC9-201ENST00000221922 RIMBP3Q9UFD9 1639 aa30.11■■■□□ 2.41
CCDC9-201ENST00000221922 KIAA1210Q9ULL0 1709 aa30.11■■■□□ 2.41
CCDC9-201ENST00000221922 RICTORQ6R327 1708 aa30.1■■■□□ 2.41
CCDC9-201ENST00000221922 TESK2Q96S53 571 aa30.08■■■□□ 2.41
CCDC9-201ENST00000221922 RALBP1Q15311 655 aa30.08■■■□□ 2.41
CCDC9-201ENST00000221922 MYOM2P54296 1465 aa30.07■■■□□ 2.4
CCDC9-201ENST00000221922 UGGT1Q9NYU2 1555 aa30.06■■■□□ 2.4
CCDC9-201ENST00000221922 DIP2CQ9Y2E4 1556 aa30.06■■■□□ 2.4
CCDC9-201ENST00000221922 IFT172Q9UG01 1749 aa30.06■■■□□ 2.4
CCDC9-201ENST00000221922 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
CCDC9-201ENST00000221922 BRD4O60885 1362 aaPredicted RBP30.02■■■□□ 2.4
CCDC9-201ENST00000221922 MYBBP1AQ9BQG0 1328 aaKnown RBP30.02■■■□□ 2.4
CCDC9-201ENST00000221922 ABCC3O15438 1527 aa30.02■■■□□ 2.4
CCDC9-201ENST00000221922 DISP3Q9P2K9 1392 aa30.02■■■□□ 2.4
CCDC9-201ENST00000221922 SMG6Q86US8 1419 aaKnown RBP30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms