RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 PKNOX2Q96KN3 472 aa10.49□□□□□ -0.73
SCG3-201ENST00000220478 POLR3GLQ9BT43 218 aa10.49□□□□□ -0.73
SCG3-201ENST00000220478 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
SCG3-201ENST00000220478 KIF21AQ7Z4S6 1674 aa10.49□□□□□ -0.73
SCG3-201ENST00000220478 RSPH6AQ9H0K4 717 aa10.49□□□□□ -0.73
SCG3-201ENST00000220478 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
SCG3-201ENST00000220478 KDM2BQ8NHM5 1336 aa10.49□□□□□ -0.73
SCG3-201ENST00000220478 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
SCG3-201ENST00000220478 PUS7Q96PZ0 661 aaKnown RBP10.47□□□□□ -0.73
SCG3-201ENST00000220478 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
SCG3-201ENST00000220478 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
SCG3-201ENST00000220478 C8orf34Q49A92 452 aa10.46□□□□□ -0.73
SCG3-201ENST00000220478 PZPP20742 1482 aa10.46□□□□□ -0.74
SCG3-201ENST00000220478 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.74
SCG3-201ENST00000220478 ABCA10Q8WWZ4 1543 aa10.45□□□□□ -0.74
SCG3-201ENST00000220478 RCAN3Q9UKA8 241 aa10.45□□□□□ -0.74
SCG3-201ENST00000220478 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
SCG3-201ENST00000220478 ZNF608Q9ULD9 1512 aaPredicted RBP10.44□□□□□ -0.74
SCG3-201ENST00000220478 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
SCG3-201ENST00000220478 USP47Q96K76 1375 aa10.44□□□□□ -0.74
SCG3-201ENST00000220478 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
SCG3-201ENST00000220478 CHIC2Q9UKJ5 165 aa10.43□□□□□ -0.74
SCG3-201ENST00000220478 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
SCG3-201ENST00000220478 BRD4O60885 1362 aaPredicted RBP10.43□□□□□ -0.74
SCG3-201ENST00000220478 NLRP1Q9C000 1473 aa10.42□□□□□ -0.74
SCG3-201ENST00000220478 PLIN1O60240 522 aa10.42□□□□□ -0.74
SCG3-201ENST00000220478 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
SCG3-201ENST00000220478 USP19O94966 1318 aa10.42□□□□□ -0.74
SCG3-201ENST00000220478 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
SCG3-201ENST00000220478 BLMP54132 1417 aaPredicted RBP10.41□□□□□ -0.74
SCG3-201ENST00000220478 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
SCG3-201ENST00000220478 NESP48681 1621 aa10.41□□□□□ -0.74
SCG3-201ENST00000220478 CRBNQ96SW2 442 aa10.4□□□□□ -0.74
SCG3-201ENST00000220478 UHRF1BP1Q6BDS2 1440 aa10.4□□□□□ -0.74
SCG3-201ENST00000220478 RALGAPBQ86X10 1494 aa10.4□□□□□ -0.74
SCG3-201ENST00000220478 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
SCG3-201ENST00000220478 CNGB1Q14028 1251 aaPredicted RBP10.39□□□□□ -0.75
SCG3-201ENST00000220478 POGKQ9P215 609 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 DAPK1P53355 1430 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 ZNF428Q96B54 188 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 ZMYND15Q9H091 742 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 ROCK1Q13464 1354 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
SCG3-201ENST00000220478 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
SCG3-201ENST00000220478 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
SCG3-201ENST00000220478 DNAJC5Q9H3Z4 198 aa10.38□□□□□ -0.75
SCG3-201ENST00000220478 KIF15Q9NS87 1388 aa10.38□□□□□ -0.75
SCG3-201ENST00000220478 ABCC5O15440 1437 aa10.38□□□□□ -0.75
SCG3-201ENST00000220478 MYBBP1AQ9BQG0 1328 aaKnown RBP10.38□□□□□ -0.75
SCG3-201ENST00000220478 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
SCG3-201ENST00000220478 CDK13Q14004 1512 aaKnown RBP10.37□□□□□ -0.75
SCG3-201ENST00000220478 CROCC2H7BZ55 1655 aa10.37□□□□□ -0.75
SCG3-201ENST00000220478 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
SCG3-201ENST00000220478 CEP170Q5SW79 1584 aa10.36□□□□□ -0.75
SCG3-201ENST00000220478 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
SCG3-201ENST00000220478 TMC1Q8TDI8 760 aa10.36□□□□□ -0.75
SCG3-201ENST00000220478 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
SCG3-201ENST00000220478 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
SCG3-201ENST00000220478 EPRSP07814 1512 aaKnown RBP10.35□□□□□ -0.75
SCG3-201ENST00000220478 KIAA0586Q9BVV6 1533 aa10.35□□□□□ -0.75
SCG3-201ENST00000220478 ROCK2O75116 1388 aaKnown RBP10.34□□□□□ -0.75
SCG3-201ENST00000220478 WDR62O43379 1518 aa10.34□□□□□ -0.75
SCG3-201ENST00000220478 INSRP06213 1382 aa10.34□□□□□ -0.75
SCG3-201ENST00000220478 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
SCG3-201ENST00000220478 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
SCG3-201ENST00000220478 ANTXR1Q9H6X2 564 aa10.34□□□□□ -0.75
SCG3-201ENST00000220478 RAD21O60216 631 aa10.33□□□□□ -0.76
SCG3-201ENST00000220478 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
SCG3-201ENST00000220478 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
SCG3-201ENST00000220478 TOPBP1Q92547 1522 aa10.33□□□□□ -0.76
SCG3-201ENST00000220478 TRPM1Q7Z4N2 1603 aa10.33□□□□□ -0.76
SCG3-201ENST00000220478 ARID3CA6NKF2 412 aa10.33□□□□□ -0.76
SCG3-201ENST00000220478 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
SCG3-201ENST00000220478 FSD2A1L4K1 749 aa10.32□□□□□ -0.76
SCG3-201ENST00000220478 ARHGEF12Q9NZN5 1544 aa10.32□□□□□ -0.76
SCG3-201ENST00000220478 IFNLR1Q8IU57 520 aaPredicted RBP10.32□□□□□ -0.76
SCG3-201ENST00000220478 RALBP1Q15311 655 aa10.31□□□□□ -0.76
SCG3-201ENST00000220478 KIAA1107Q9UPP5 1409 aa10.31□□□□□ -0.76
SCG3-201ENST00000220478 SEC24BO95487 1268 aa10.3□□□□□ -0.76
SCG3-201ENST00000220478 XRCC6P12956 609 aaKnown RBP eCLIP10.3□□□□□ -0.76
SCG3-201ENST00000220478 KDM5DQ9BY66 1539 aa10.29□□□□□ -0.76
SCG3-201ENST00000220478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCG3-201ENST00000220478 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
SCG3-201ENST00000220478 PLEKHH2Q8IVE3 1493 aa10.29□□□□□ -0.76
SCG3-201ENST00000220478 FANCD2Q9BXW9 1451 aa10.29□□□□□ -0.76
SCG3-201ENST00000220478 ZNF521Q96K83 1311 aa10.29□□□□□ -0.76
SCG3-201ENST00000220478 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
SCG3-201ENST00000220478 CLCN1P35523 988 aa10.28□□□□□ -0.76
SCG3-201ENST00000220478 PANK2Q9BZ23 570 aa10.28□□□□□ -0.76
SCG3-201ENST00000220478 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
SCG3-201ENST00000220478 ZNF644Q9H582 1327 aaPredicted RBP10.28□□□□□ -0.76
SCG3-201ENST00000220478 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
SCG3-201ENST00000220478 NLRP13Q86W25 1043 aa10.27□□□□□ -0.77
SCG3-201ENST00000220478 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
SCG3-201ENST00000220478 ADGRL2O95490 1459 aa10.27□□□□□ -0.77
SCG3-201ENST00000220478 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
SCG3-201ENST00000220478 RBM25P49756 843 aaKnown RBP10.27□□□□□ -0.77
SCG3-201ENST00000220478 NEUROD2Q15784 382 aa10.27□□□□□ -0.77
SCG3-201ENST00000220478 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms