RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 SlkO54988 1233 aa15.37■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Ccer1Q9CQL2 403 aa15.37■□□□□ 0.05
Ssh1-202ENSMUST00000112298 UacaQ8CGB3 1411 aa15.37■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Ush1cQ9ES64 910 aa15.36■□□□□ 0.05
Ssh1-202ENSMUST00000112298 St18Q80TY4 1045 aa15.36■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Tpd52l1O54818 204 aa15.35■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Slc4a1apE9PX68 744 aa15.35■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Sf3a1Q8K4Z5 791 aaKnown RBP15.35■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Chmp3Q9CQ10 224 aa15.34■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Mre11Q61216 706 aa15.34■□□□□ 0.05
Ssh1-202ENSMUST00000112298 Txndc2Q6P902 515 aa15.33■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Smg6P61406 1418 aaKnown RBP15.33■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Carmil1Q6EDY6 1374 aa15.32■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Rab11fip3Q8CHD8 1047 aa15.32■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Srek1Q8BZX4 494 aaKnown RBP15.31■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Arid3cA6PWV5 409 aa15.31■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Nap1l3Q794H2 544 aa15.31■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Stk31Q99MW1 1018 aa15.31■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Filip1lQ6P6L0 1131 aa15.3■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Kif3bQ61771 747 aa15.3■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Tsen2Q6P7W5 460 aa15.3■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Ccdc146E9Q9F7 977 aa15.3■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Tpm1P58771 284 aa15.3■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Gpatch11Q3UFS4 262 aa15.29■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Rock1P70335 1354 aa15.29■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Casq1O09165 405 aa15.29■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Tpm2P58774 284 aa15.29■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Ggt6Q6PDE7 497 aa15.29■□□□□ 0.04
Ssh1-202ENSMUST00000112298 A0A1L1SQF0 893 aa15.28■□□□□ 0.04
Ssh1-202ENSMUST00000112298 ChgaP26339 463 aaKnown RBP15.27■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Sox12Q04890 314 aa15.27■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Tpm4Q6IRU2 248 aa15.27■□□□□ 0.04
Ssh1-202ENSMUST00000112298 Gtf3c3Q3TMP1 882 aa15.27■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ralbp1Q62172 648 aa15.26■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Evc2Q8K1G2 1220 aa15.26■□□□□ 0.03
Ssh1-202ENSMUST00000112298 KinQ8K339 391 aa15.26■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Pank3Q8R2W9 370 aa15.26■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Slc4a10Q5DTL9 1118 aa15.25■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ipo7Q9EPL8 1038 aaKnown RBP15.25■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Gm21969J3QJZ1 289 aa15.25■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ccdc60Q8C4J0 545 aa15.25■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Nolc1E9Q5C9 702 aaKnown RBP15.25■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Cplx2P84086 134 aa15.25■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ftsj3Q9DBE9 838 aaKnown RBP15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Sh3bgrQ9WUZ7 214 aa15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Smc4Q8CG47 1286 aa15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ap3b2Q9JME5 1082 aa15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Usp47Q8BY87 1376 aa15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Fan1Q69ZT1 1020 aa15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Kif16bB1AVY7 1312 aa15.24■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ccnb3Q810T2 1396 aa15.23■□□□□ 0.03
Ssh1-202ENSMUST00000112298 G3bp1P97855 465 aaKnown RBP15.23■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Pibf1E9Q6K3 756 aa15.23■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ccdc34Q3UI66 367 aa15.23■□□□□ 0.03
Ssh1-202ENSMUST00000112298 GsdmaQ9EST1 446 aa15.23■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ciz1Q8VEH2 845 aa15.22■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Q8BT18 775 aa15.22■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Utp14aQ640M1 767 aaKnown RBP15.22■□□□□ 0.03
Ssh1-202ENSMUST00000112298 Ddx11Q6AXC6 880 aa15.2■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Fam184bQ0KK56 942 aa15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Sart1Q9Z315 806 aaKnown RBP15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Trim58Q5NCC9 485 aa15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Kif4P33174 1231 aa15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Cux2P70298 1426 aa15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Kri1Q8VDQ9 704 aaKnown RBP15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Ecm2Q5FW85 670 aa15.19■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Gprasp1Q5U4C1 1347 aa15.18■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Gabpb2P81069 414 aa15.18■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Rnf20Q5DTM8 973 aa15.18■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Taf3Q5HZG4 932 aa15.18■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Hmgn5Q9JL35 406 aa15.18■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Rabep1O35551 862 aa15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Hook1Q8BIL5 728 aa15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Isy1Q69ZQ2 285 aaKnown RBP15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Gripap1Q8VD04 806 aa15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Atl3Q91YH5 541 aa15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 ScribQ80U72 1612 aa15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Kif7B7ZNG0 1348 aa15.17■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Mical1Q8VDP3 1048 aa15.16■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Utp3Q9JI13 469 aaKnown RBP15.16■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Tceal9Q9DD24 104 aa15.16■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Inpp5dQ9ES52 1191 aa15.16■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Zrsr2Q62377 462 aaKnown RBP15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Odf2A3KGV1 830 aaKnown RBP15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 WrnO09053 1401 aa15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Ccdc173A0JLY1 547 aa15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Vps53Q8CCB4 832 aa15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 PhaxQ9JJT9 385 aaKnown RBP15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Kif3aP28741 701 aa15.15■□□□□ 0.02
Ssh1-202ENSMUST00000112298 Noc3lQ8VI84 807 aaKnown RBP15.14■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Senp3Q9EP97 568 aaKnown RBP15.14■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Crybg2B7ZCC2 1516 aa15.14■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Usp40Q8BWR4 1235 aa15.14■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Rec8Q8C5S7 591 aa15.14■□□□□ 0.01
Ssh1-202ENSMUST00000112298 CftrP26361 1476 aa15.13■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Rapgef2Q8CHG7 1496 aa15.13■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Krt82Q99M74 516 aa15.13■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Ak7Q9D2H2 614 aa15.13■□□□□ 0.01
Ssh1-202ENSMUST00000112298 AppP12023 770 aa15.13■□□□□ 0.01
Ssh1-202ENSMUST00000112298 Cabp4Q8VHC5 271 aa15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms