RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Gapvd1Q6PAR5 1458 aa11.86□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Kiaa1522A2A7S8 1013 aa11.85□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Scaf1Q5U4C3 1256 aaKnown RBP11.85□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 RydenQ8CAK3 290 aaKnown RBP11.84□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Msh5Q9QUM7 833 aa11.84□□□□□ -0.51
Ccdc47-202ENSMUST00000106865 Axin1O35625 863 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Aldh16a1Q571I9 802 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Gm156Q58A37 223 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Foxd4Q60688 444 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 GopcQ8BH60 463 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Unc5aQ8K1S4 898 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Pdcd7Q9WTY1 482 aa11.83□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Pbrm1Q8BSQ9 1634 aaKnown RBP11.82□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Disp1Q3TDN0 1521 aa11.82□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Onecut3Q8K557 490 aa11.82□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 PogzQ8BZH4 1409 aaKnown RBP11.82□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Nup160Q9Z0W3 1402 aaKnown RBP11.81□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Ppfibp2O35711 882 aa11.81□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 PsdQ5DTT2 1024 aa11.81□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Gga1Q8R0H9 635 aa11.8□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Crim1Q9JLL0 1037 aa11.79□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Clec2iQ9WVF9 217 aa11.79□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Plekhg3Q4VAC9 1341 aa11.78□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Golga3P55937 1487 aa11.77□□□□□ -0.52
Ccdc47-202ENSMUST00000106865 Il27Q8K3I6 234 aa11.77□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Gpr37Q9QY42 600 aa11.77□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Cc2d2bA0A286YDU8 1405 aa11.77□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Hs1bp3Q3TC93 395 aa11.76□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Samd9lQ69Z37 1561 aa11.75□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Rapgef2Q8CHG7 1496 aa11.74□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Duox2A2AQ99 1517 aa11.74□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 HrcG5E8J6 738 aa11.73□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Psen1P49769 467 aa11.73□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Setbp1Q9Z180 1582 aa11.72□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Adra2bP30545 450 aa11.72□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Fbxo31Q3TQF0 507 aa11.72□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Ier5lQ99J55 406 aa11.72□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Map2k5Q9WVS7 448 aa11.72□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Alkbh8Q80Y20 664 aa11.71□□□□□ -0.53
Ccdc47-202ENSMUST00000106865 Fgd6Q69ZL1 1399 aa11.7□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Chd1P40201 1711 aa11.7□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Ccdc136Q3TVA9 1136 aa11.7□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Abcc1O35379 1528 aa11.7□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 AqrQ8CFQ3 1481 aaKnown RBP11.7□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Rpgrip1Q9EPQ2 1331 aa11.69□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 LtbrP50284 415 aa11.69□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Dnajc5gQ8C632 165 aa11.69□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Mllt6B1AR10 1109 aa11.68□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Tmc3Q7TQ69 1130 aa11.68□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Hoxa2P31245 372 aa11.67□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Irx5Q9JKQ4 484 aa11.66□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Ythdc2B2RR83 1445 aaKnown RBP11.66□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Uri1Q3TLD5 531 aa11.65□□□□□ -0.54
Ccdc47-202ENSMUST00000106865 Rpusd2Q149F1 553 aa11.64□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Top2aQ01320 1528 aaKnown RBP11.64□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Magi3Q9EQJ9 1476 aa11.63□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Ak9G3UYQ4 1894 aa11.63□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Alpk3Q924C5 1678 aa11.63□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Gimap6Q8K349 305 aa11.63□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Grin2aP35436 1464 aa11.63□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Gpatch8A2A6A1 1505 aa11.62□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Fchsd2Q3USJ8 740 aa11.62□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 AknaQ80VW7 1404 aa11.61□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Grin2bQ01097 1482 aa11.61□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Ccdc88bQ4QRL3 1481 aa11.61□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Farp1F8VPU2 1048 aa11.6□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 AdgbG3UZ78 1657 aa11.59□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Dab2P98078 766 aa11.59□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Ripply1Q2WG77 201 aa11.59□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Retreg3Q9CQV4 466 aa11.59□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Hic1Q9R1Y5 733 aa11.59□□□□□ -0.55
Ccdc47-202ENSMUST00000106865 Rad54l2Q99NG0 1466 aa11.58□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Irf5P56477 497 aa11.58□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Scaf8Q6DID3 1268 aa11.58□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Znf330Q922H9 316 aa11.58□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Lhx6Q9R1R0 363 aa11.58□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 EprsQ8CGC7 1512 aaKnown RBP11.57□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Pcmtd1P59913 357 aa11.57□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Tsr1Q5SWD9 803 aa11.56□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Arhgef11Q68FM7 1552 aa11.56□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Nudt12Q9DCN1 462 aa11.56□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Dnmt1P13864 1620 aaKnown RBP11.55□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 CadpsQ80TJ1 1355 aa11.54□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 St18Q80TY4 1045 aa11.53□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Ppp1r18Q8BQ30 594 aa11.53□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Adnp2Q8CHC8 1165 aaKnown RBP11.53□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 BC005561E9Q5E2 1589 aa11.53□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Ttc37F8VPK0 1563 aa11.53□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 AI481877A2ALV5 1481 aa11.52□□□□□ -0.56
Ccdc47-202ENSMUST00000106865 Mapkbp1Q6NS57 1503 aa11.52□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Map3k7Q62073 579 aa11.52□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Kri1Q8VDQ9 704 aaKnown RBP11.52□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Dcbld2Q91ZV3 769 aa11.52□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Chst12Q99LL3 419 aa11.52□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Clasp1Q80TV8 1535 aaKnown RBP11.51□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Ints3Q7TPD0 1041 aaKnown RBP11.5□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Efcab5A0JP43 1406 aa11.5□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Pla2r1Q62028 1487 aa11.5□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Rnf225Q9D7D1 332 aa11.49□□□□□ -0.57
Ccdc47-202ENSMUST00000106865 Soga1E1U8D0 1418 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms