Protein–RNA interactions for Protein: Q8R0H9

Gga1, ADP-ribosylation factor-binding protein GGA1, mousemouse

Predictions only

Length 635 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gga1Q8R0H9 Gm25239-201ENSMUST00000174915 86 ntBASIC40.24■■■■■ 4.03
Gga1Q8R0H9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Gga1Q8R0H9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
Gga1Q8R0H9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Gga1Q8R0H9 Gm15042-201ENSMUST00000120212 883 ntBASIC35.44■■■■□ 3.26
Gga1Q8R0H9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Gga1Q8R0H9 Gm24109-201ENSMUST00000175489 103 ntBASIC34.72■■■■□ 3.15
Gga1Q8R0H9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
Gga1Q8R0H9 Gm15045-201ENSMUST00000117359 883 ntBASIC34.67■■■■□ 3.14
Gga1Q8R0H9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Gga1Q8R0H9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.94■■■■□ 3.02
Gga1Q8R0H9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Gga1Q8R0H9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Gga1Q8R0H9 Gm23366-201ENSMUST00000175022 89 ntBASIC33.66■■■□□ 2.98
Gga1Q8R0H9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Gga1Q8R0H9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.33■■■□□ 2.93
Gga1Q8R0H9 Psd-208ENSMUST00000224556 2034 ntBASIC33.12■■■□□ 2.89
Gga1Q8R0H9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Gga1Q8R0H9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Gga1Q8R0H9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Gga1Q8R0H9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Gga1Q8R0H9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Gga1Q8R0H9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Gga1Q8R0H9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
Gga1Q8R0H9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Gga1Q8R0H9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Gga1Q8R0H9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.55■■■□□ 2.8
Gga1Q8R0H9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.52■■■□□ 2.8
Gga1Q8R0H9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Gga1Q8R0H9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Gga1Q8R0H9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Gga1Q8R0H9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.14■■■□□ 2.74
Gga1Q8R0H9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Gga1Q8R0H9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.08■■■□□ 2.73
Gga1Q8R0H9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
Gga1Q8R0H9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gga1Q8R0H9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Gga1Q8R0H9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Gga1Q8R0H9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Gga1Q8R0H9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Gga1Q8R0H9 Gm25238-201ENSMUST00000174914 89 ntBASIC31.66■■■□□ 2.66
Gga1Q8R0H9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.64■■■□□ 2.66
Gga1Q8R0H9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.51■■■□□ 2.63
Gga1Q8R0H9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gga1Q8R0H9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Gga1Q8R0H9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Gga1Q8R0H9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Gga1Q8R0H9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Gga1Q8R0H9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Gga1Q8R0H9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Gga1Q8R0H9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.18■■■□□ 2.58
Gga1Q8R0H9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.1■■■□□ 2.57
Gga1Q8R0H9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Gga1Q8R0H9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
Gga1Q8R0H9 Gm27325-201ENSMUST00000175467 74 ntBASIC31.09■■■□□ 2.57
Gga1Q8R0H9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Gga1Q8R0H9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Gga1Q8R0H9 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.86■■■□□ 2.53
Gga1Q8R0H9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.84■■■□□ 2.53
Gga1Q8R0H9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Gga1Q8R0H9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Gga1Q8R0H9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.76■■■□□ 2.51
Gga1Q8R0H9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Gga1Q8R0H9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.7■■■□□ 2.51
Gga1Q8R0H9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.7■■■□□ 2.5
Gga1Q8R0H9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Gga1Q8R0H9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Gga1Q8R0H9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gga1Q8R0H9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gga1Q8R0H9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Gga1Q8R0H9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Gga1Q8R0H9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
Gga1Q8R0H9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gga1Q8R0H9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.42■■■□□ 2.46
Gga1Q8R0H9 Rab21-202ENSMUST00000218831 843 ntBASIC30.37■■■□□ 2.45
Gga1Q8R0H9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Gga1Q8R0H9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Gga1Q8R0H9 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.3■■■□□ 2.44
Gga1Q8R0H9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.3■■■□□ 2.44
Gga1Q8R0H9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gga1Q8R0H9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.24■■■□□ 2.43
Gga1Q8R0H9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gga1Q8R0H9 Gm25262-201ENSMUST00000174934 133 ntBASIC30.23■■■□□ 2.43
Gga1Q8R0H9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Gga1Q8R0H9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Gga1Q8R0H9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Gga1Q8R0H9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Gga1Q8R0H9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Gga1Q8R0H9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gga1Q8R0H9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.93■■■□□ 2.38
Gga1Q8R0H9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.91■■■□□ 2.38
Gga1Q8R0H9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Gga1Q8R0H9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Gga1Q8R0H9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Gga1Q8R0H9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Gga1Q8R0H9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Gga1Q8R0H9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Gga1Q8R0H9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Gga1Q8R0H9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Gga1Q8R0H9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.74■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 337.8 ms