RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Mia2Q91ZV0 1396 aa13.78□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Samd1D3YXK1 519 aa13.78□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Neo1P97798 1493 aa13.77□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Irx6Q9ER75 438 aa13.77□□□□□ -0.21
Rnf40-201ENSMUST00000033088 CatipB9EKE5 520 aa13.77□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Jph4Q80WT0 628 aa13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Liat1Q810M6 228 aa13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Dhx57Q6P5D3 1388 aaKnown RBP13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Mfap1aC0HKD8 439 aaKnown RBP13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Mfap1bC0HKD9 439 aaKnown RBP13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 EspnQ9ET47 871 aa13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Cabp1Q9JLK7 227 aa13.76□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Rwdd1Q9CQK7 243 aa13.75□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Ccdc141E9Q8Q6 1531 aa13.75□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Ncoa3O09000 1398 aa13.75□□□□□ -0.21
Rnf40-201ENSMUST00000033088 GorabQ8BRM2 368 aa13.75□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Gcc2Q8CHG3 1679 aa13.75□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Mphosph9A6H5Y1 991 aa13.75□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Gm13695A2AK44 830 aa13.74□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Kdm5bQ80Y84 1544 aa13.73□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Ttll13A4Q9F6 804 aa13.73□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Zscan21Q07231 555 aa13.73□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Arhgef11Q68FM7 1552 aa13.73□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Esx1O88933 382 aa13.72□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Znf316Q6PGE4 1016 aa13.72□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Fhad1A6PWD2 1420 aa13.72□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Trak1Q6PD31 939 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Fam163aQ8CAA5 168 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 A2mQ6GQT1 1474 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Magi1Q6RHR9 1471 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Washc2Q6PGL7 1334 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Naip2Q9QUK4 1447 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Arhgef12Q8R4H2 1543 aaKnown RBP13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Fgd1P52734 960 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Ipo4Q8VI75 1082 aa13.71□□□□□ -0.21
Rnf40-201ENSMUST00000033088 Mak16Q8BGS0 296 aaKnown RBP13.71□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Rrbp1Q99PL5 1605 aaKnown RBP13.7□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Gm14025A2AP89 1413 aa13.7□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Vps8Q0P5W1 1427 aa13.69□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Ak7Q9D2H2 614 aa13.69□□□□□ -0.22
Rnf40-201ENSMUST00000033088 1700019A02RikA0A087WPV9 146 aa13.69□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Ipo8Q7TMY7 1010 aa13.69□□□□□ -0.22
Rnf40-201ENSMUST00000033088 UacaQ8CGB3 1411 aa13.68□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Plin1Q8CGN5 517 aa13.68□□□□□ -0.22
Rnf40-201ENSMUST00000033088 L3mbtl2P59178 703 aa13.68□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Rfx1P48377 963 aa13.68□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Q7TT23 1179 aa13.68□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Kiaa1551Q5DTW7 1521 aa13.67□□□□□ -0.22
Rnf40-201ENSMUST00000033088 NudcO35685 332 aaKnown RBP13.67□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Rpgrip1lQ8CG73 1264 aa13.67□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Cdc42bpaQ3UU96 1719 aa13.66□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Zfp644E9QA22 1323 aa13.66□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Chmp4cQ9D7F7 232 aa13.66□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Q4VA45 678 aa13.65□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Mroh2aD3Z750 1679 aa13.65□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Gpatch11Q3UFS4 262 aa13.65□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Zcchc11B2RX14 1644 aaKnown RBP13.65□□□□□ -0.22
Rnf40-201ENSMUST00000033088 Abcc1O35379 1528 aa13.64□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Stk11ipQ3TAA7 1072 aa13.64□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Mapkbp1Q6NS57 1503 aa13.64□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Cwc22Q8C5N3 908 aaKnown RBP13.64□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Plekhh2Q8C115 1491 aa13.64□□□□□ -0.23
Rnf40-201ENSMUST00000033088 KarsQ99MN1 595 aaKnown RBP13.63□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Mroh3A0A1D5RM54 893 aa13.63□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Rbm10Q99KG3 930 aaKnown RBP13.62□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Fancd2Q80V62 1450 aa13.62□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Prex2Q3LAC4 1598 aa13.62□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Mtus2Q3UHD3 1353 aa13.62□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Tmco5bQ80X59 307 aa13.61□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Abcc5Q9R1X5 1436 aa13.61□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Arhgef40Q3UPH7 1517 aa13.6□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Egfem1Q8C088 590 aa13.6□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Adcy10Q8C0T9 1614 aa13.6□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Ifit1bl1D3Z6F0 470 aa13.59□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Tnnt2P50752 301 aa13.59□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Rfx7F8VPJ6 1459 aa13.59□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Inpp5dQ9ES52 1191 aa13.59□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Mlh3A0A1Y7VMP7 1443 aa13.59□□□□□ -0.23
Rnf40-201ENSMUST00000033088 Plppr3Q7TPB0 716 aa13.58□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Ankrd36D3Z4K0 1415 aa13.58□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Chd1P40201 1711 aa13.57□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Zfp444Q3TDV8 331 aaKnown RBP13.57□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Pank1Q8K4K6 548 aa13.57□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Caskin1Q6P9K8 1431 aa13.56□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Paxip1Q6NZQ4 1056 aa13.56□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Slc4a1apE9PX68 744 aa13.56□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Stk24Q99KH8 431 aa13.55□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Il16O54824 1322 aa13.55□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Mre11Q61216 706 aa13.55□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Pank3Q8R2W9 370 aa13.55□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Usp47Q8BY87 1376 aa13.55□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Dcaf11Q91VU6 549 aa13.55□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Tdrd9Q14BI7 1383 aa13.54□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Pcmtd1P59913 357 aa13.54□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Pdcl3Q8BVF2 240 aa13.53□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Kdm6bQ5NCY0 1641 aa13.53□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Gm20521D3Z5F7 333 aa13.53□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Zfp777B9EKF4 885 aa13.52□□□□□ -0.24
Rnf40-201ENSMUST00000033088 Pabpn1Q8CCS6 302 aaKnown RBP13.52□□□□□ -0.25
Rnf40-201ENSMUST00000033088 Wdr7Q920I9 1489 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 174.1 ms