RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Fam163aQ8CAA5 168 aa23.75■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Erbb3Q61526 1339 aa23.75■■□□□ 1.39
Ptpra-201ENSMUST00000028769 CrbnQ8C7D2 445 aa23.74■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Myom3A2ABU4 1439 aa23.73■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Nup160Q9Z0W3 1402 aaKnown RBP23.73■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Dbr1Q923B1 550 aa23.73■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Neo1P97798 1493 aa23.72■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Ccdc141E9Q8Q6 1531 aa23.71■■□□□ 1.39
Ptpra-201ENSMUST00000028769 Naip6Q9JIB6 1403 aa23.7■■□□□ 1.38
Ptpra-201ENSMUST00000028769 ChgaP26339 463 aaKnown RBP23.69■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Abcc2Q8VI47 1543 aa23.69■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Mak16Q8BGS0 296 aaKnown RBP23.69■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Tcerg1Q8CGF7 1100 aaKnown RBP23.68■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Slc4a1apE9PX68 744 aa23.67■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Neurod2Q62414 383 aa23.67■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Clstn2Q9ER65 966 aa23.66■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Cdc42bpaQ3UU96 1719 aa23.66■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Trappc8E9PWG2 1437 aa23.65■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Map3k5O35099 1380 aa23.65■■□□□ 1.38
Ptpra-201ENSMUST00000028769 Rock2P70336 1388 aa23.63■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Sall3Q62255 1320 aa23.63■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Cd109Q8R422 1442 aa23.63■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Kiaa1551Q5DTW7 1521 aa23.62■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Cnga1P29974 684 aa23.61■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Arhgef12Q8R4H2 1543 aaKnown RBP23.61■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Stk24Q99KH8 431 aa23.6■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Mroh2aD3Z750 1679 aa23.6■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Ssh2Q5SW75 1423 aa23.59■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Map3k4O08648 1597 aa23.59■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Mbd5B1AYB6 1498 aa23.59■■□□□ 1.37
Ptpra-201ENSMUST00000028769 PrxO55103 1391 aa23.58■■□□□ 1.37
Ptpra-201ENSMUST00000028769 Zscan10Q3URR7 782 aa23.57■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Ecm2Q5FW85 670 aa23.57■■□□□ 1.36
Ptpra-201ENSMUST00000028769 RalgapbQ8BQZ4 1484 aa23.56■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Spag9Q58A65 1321 aaKnown RBP23.55■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Pde4cQ3UEI1 686 aa23.55■■□□□ 1.36
Ptpra-201ENSMUST00000028769 ArxO35085 564 aa23.55■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Arhgap5P97393 1501 aa23.54■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Atp7aQ64430 1491 aa23.54■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Nlrp6Q91WS2 869 aa23.54■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Polr3aB2RXC6 1390 aa23.53■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Mapkbp1Q6NS57 1503 aa23.53■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Srcin1Q9QWI6 1250 aa23.53■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Mlh3A0A1Y7VMP7 1443 aa23.52■■□□□ 1.36
Ptpra-201ENSMUST00000028769 Ipo9Q91YE6 1041 aa23.51■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Lamc1P02468 1607 aaKnown RBP23.51■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Arid3cA6PWV5 409 aa23.51■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Gm20521D3Z5F7 333 aa23.5■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Tmf1B9EKI3 1091 aa23.5■■□□□ 1.35
Ptpra-201ENSMUST00000028769 PrkcshO08795 521 aa23.49■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Rangap1P46061 589 aaKnown RBP23.49■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Polr3glQ8R0C0 218 aa23.48■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Kif3bQ61771 747 aa23.46■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Speer4f1Q9D5Q6 258 aa23.46■■□□□ 1.35
Ptpra-201ENSMUST00000028769 Fan1Q69ZT1 1020 aa23.45■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Trim26Q99PN3 545 aa23.45■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Asxl1P59598 1514 aa23.45■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Dcaf11Q91VU6 549 aa23.44■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Kank1E9Q238 1360 aa23.44■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Ttll13A4Q9F6 804 aa23.44■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Upf2A2AT37 1269 aaKnown RBP23.43■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Ccdc27Q3V036 639 aa23.43■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Ppp2r1aQ76MZ3 589 aa23.43■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Rock1P70335 1354 aa23.43■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Dot1lQ6XZL8 1540 aa23.43■■□□□ 1.34
Ptpra-201ENSMUST00000028769 DaxxO35613 739 aa23.43■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Cpsf1Q9EPU4 1441 aaKnown RBP23.41■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Caskin1Q6P9K8 1431 aa23.41■■□□□ 1.34
Ptpra-201ENSMUST00000028769 Kif16bB1AVY7 1312 aa23.4■■□□□ 1.34
Ptpra-201ENSMUST00000028769 CanxP35564 591 aaKnown RBP23.39■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Armcx1Q9CX83 456 aa23.39■■□□□ 1.33
Ptpra-201ENSMUST00000028769 PtprgQ05909 1442 aa23.39■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Fam184bQ0KK56 942 aa23.38■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Trpm2Q91YD4 1506 aa23.38■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Fancd2Q80V62 1450 aa23.38■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Lrriq1Q0P5X1 1673 aa23.37■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Tarbp1E9Q368 1579 aa23.37■■□□□ 1.33
Ptpra-201ENSMUST00000028769 4930567H17RikQ3V0K5 233 aa23.37■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Prkrip1Q9CWV6 186 aaKnown RBP23.37■■□□□ 1.33
Ptpra-201ENSMUST00000028769 4933416C03RikQ3V063 378 aa23.36■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Lrrc9Q8CDN9 1456 aa23.35■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Kif7B7ZNG0 1348 aa23.35■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Srpk2O54781 681 aaKnown RBP23.34■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Rwdd1Q9CQK7 243 aa23.34■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Kif21bQ9QXL1 1668 aa23.33■■□□□ 1.33
Ptpra-201ENSMUST00000028769 Chmp5Q9D7S9 219 aa23.32■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Usp40Q8BWR4 1235 aa23.31■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Gtf2e1Q9D0D5 440 aa23.31■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Fgd6Q69ZL1 1399 aa23.3■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Gas2l2Q5SSG4 860 aa23.3■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Zcchc11B2RX14 1644 aaKnown RBP23.29■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Gm14025A2AP89 1413 aa23.28■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Trim30dE9PWL0 497 aa23.27■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Tspyl2Q7TQI8 677 aa23.27■■□□□ 1.32
Ptpra-201ENSMUST00000028769 Fmn2Q9JL04 1578 aa23.26■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Ccdc30Q8BVF4 654 aa23.25■■□□□ 1.31
Ptpra-201ENSMUST00000028769 DroshaQ5HZJ0 1373 aaKnown RBP23.25■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Iqcf3Q9D498 203 aa23.24■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Atp1b4Q99ME6 356 aa23.23■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Kdm5cP41230 1554 aa23.23■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms