RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Hmgn5Q9JL35 406 aa17.69■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Gabpb2P81069 414 aa17.69■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Kif27Q7M6Z4 1394 aa17.69■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Chmp3Q9CQ10 224 aa17.69■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Znhit6Q3UFB2 460 aaKnown RBP17.68■□□□□ 0.42
Col7a1-201ENSMUST00000026740 CrebrfQ8CDG5 640 aaKnown RBP17.68■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Cwc15Q9JHS9 229 aaKnown RBP17.68■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Gprasp1Q5U4C1 1347 aa17.68■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Ppm1eQ80TL0 749 aa17.68■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Smc4Q8CG47 1286 aa17.68■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Mfap1aC0HKD8 439 aaKnown RBP17.67■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Mfap1bC0HKD9 439 aaKnown RBP17.67■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Anp32eP97822 260 aaKnown RBP17.67■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Sh3bgrQ9WUZ7 214 aa17.66■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Fmn1Q05860 1466 aa17.66■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Krt82Q99M74 516 aa17.65■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Rundc1Q0VDN7 615 aa17.65■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Ralbp1Q62172 648 aa17.65■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Tnnt1O88346 262 aa17.65■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Cnga1P29974 684 aa17.64■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Prm3Q62100 101 aa17.64■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Dhx8A2A4P0 1244 aaKnown RBP17.64■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Gpatch11Q3UFS4 262 aa17.63■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Aebp2Q9Z248 504 aaKnown RBP17.63■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Ggt6Q6PDE7 497 aa17.63■□□□□ 0.41
Col7a1-201ENSMUST00000026740 PhaxQ9JJT9 385 aaKnown RBP17.63■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Map4P27546 1125 aaKnown RBP17.62■□□□□ 0.41
Col7a1-201ENSMUST00000026740 UvssaQ9D479 717 aa17.62■□□□□ 0.41
Col7a1-201ENSMUST00000026740 HmmrQ00547 794 aaKnown RBP17.61■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Rnf20Q5DTM8 973 aa17.61■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Mre11Q61216 706 aa17.61■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Necab1Q8BG18 352 aa17.61■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Ccdc43Q9CR29 222 aaKnown RBP17.6■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Fbxo2Q80UW2 297 aa17.6■□□□□ 0.41
Col7a1-201ENSMUST00000026740 EzrP26040 586 aaKnown RBP17.6■□□□□ 0.41
Col7a1-201ENSMUST00000026740 KinQ8K339 391 aa17.6■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Lrrcc1Q69ZB0 1026 aa17.59■□□□□ 0.41
Col7a1-201ENSMUST00000026740 NaspQ99MD9 773 aaKnown RBP17.59■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Ccdc173A0JLY1 547 aa17.58■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Tomm22Q9CPQ3 142 aa17.58■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Pkd2O35245 966 aa17.58■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Psme1P97371 249 aa17.58■□□□□ 0.41
Col7a1-201ENSMUST00000026740 CenpjQ569L8 1344 aa17.58■□□□□ 0.41
Col7a1-201ENSMUST00000026740 Ifit1bl1D3Z6F0 470 aa17.57■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Casq1O09165 405 aa17.57■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Cux1P53564 1515 aa17.57■□□□□ 0.4
Col7a1-201ENSMUST00000026740 GorabQ8BRM2 368 aa17.57■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Baz1bQ9Z277 1479 aa17.57■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Ciz1Q8VEH2 845 aa17.56■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Gpatch3Q8BIY1 525 aa17.55■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Ap3b2Q9JME5 1082 aa17.55■□□□□ 0.4
Col7a1-201ENSMUST00000026740 SlkO54988 1233 aa17.55■□□□□ 0.4
Col7a1-201ENSMUST00000026740 UacaQ8CGB3 1411 aa17.54■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Gripap1Q8VD04 806 aa17.54■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Kif4P33174 1231 aa17.54■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Cplx1P63040 134 aa17.54■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Ppp4r3bQ922R5 820 aa17.53■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Utp3Q9JI13 469 aaKnown RBP17.53■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Ksr2Q3UVC0 959 aa17.53■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Q8BT18 775 aa17.53■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Lemd3Q9WU40 921 aa17.53■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Rec8Q8C5S7 591 aa17.52■□□□□ 0.4
Col7a1-201ENSMUST00000026740 Wdr78E9PYY5 807 aa17.52■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Birc3O08863 600 aa17.5■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Cchcr1Q8K2I2 770 aa17.5■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Tceal9Q9DD24 104 aa17.5■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Srcin1Q9QWI6 1250 aa17.5■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Ppp1r18Q8BQ30 594 aa17.49■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Kif16bB1AVY7 1312 aa17.49■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Trim29Q8R2Q0 587 aa17.49■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Dcaf11Q91VU6 549 aa17.48■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Slc4a3P16283 1227 aa17.48■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Txndc2Q6P902 515 aa17.47■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Ubxn4Q8VCH8 506 aa17.47■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Mns1Q61884 491 aa17.47■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Cttnbp2B9EJA2 1648 aa17.47■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Cluap1Q8R3P7 413 aa17.46■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Rock1P70335 1354 aa17.46■□□□□ 0.39
Col7a1-201ENSMUST00000026740 WrnO09053 1401 aa17.46■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Stk26Q99JT2 416 aa17.46■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Luc7lQ9CYI4 371 aaKnown RBP17.46■□□□□ 0.39
Col7a1-201ENSMUST00000026740 Stk31Q99MW1 1018 aa17.45■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Nup155Q99P88 1391 aaKnown RBP17.45■□□□□ 0.38
Col7a1-201ENSMUST00000026740 AknaQ80VW7 1404 aa17.45■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Hoxa7P02830 229 aa17.45■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Smc2Q8CG48 1191 aaKnown RBP17.45■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Hspa5P20029 655 aaKnown RBP17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 March6Q6ZQ89 909 aa17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Exoc6Q8R313 802 aa17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Slc4a10Q5DTL9 1118 aa17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Erlin2Q8BFZ9 340 aa17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Pds5bQ4VA53 1446 aaKnown RBP17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Gtf3c3Q3TMP1 882 aa17.44■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Erc2Q6PH08 957 aa17.43■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Paf1Q8K2T8 535 aa17.43■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Mical1Q8VDP3 1048 aa17.43■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Plin1Q8CGN5 517 aa17.43■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Gps2Q921N8 327 aa17.43■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Bicd2Q921C5 820 aa17.42■□□□□ 0.38
Col7a1-201ENSMUST00000026740 Pip4k2aO70172 405 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 89.2 ms