RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 NudcO35685 332 aaKnown RBP5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 IqubQ8CDK3 788 aa5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Unc13aQ4KUS2 1712 aa5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Map4P27546 1125 aaKnown RBP5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Neurl4Q5NCX5 1563 aa5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Arhgef40Q3UPH7 1517 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Mak16Q8BGS0 296 aaKnown RBP5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Pik3c2gO70167 1506 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 PtmaP26350 111 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Igf1rQ60751 1373 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Hspa5P20029 655 aaKnown RBP5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Ppargc1bQ8VHJ7 1014 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Adgrl2Q8JZZ7 1487 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Srpk2O54781 681 aaKnown RBP5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Fgd6Q69ZL1 1399 aa5.75□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Rgl3Q3UYI5 709 aa5.74□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Safb2Q80YR5 991 aaKnown RBP5.74□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Rapgef6Q5NCJ1 1609 aa5.74□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Adamts12Q811B3 1600 aa5.74□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Fam43aQ8BUP8 424 aa5.74□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Dapk1Q80YE7 1442 aa5.74□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Arhgap27A2AB59 869 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 MccE9PWI3 1003 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Wwc2Q6NXJ0 1187 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Gtf3c5Q8R2T8 520 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 CalrP14211 416 aaKnown RBP5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Naip5Q9R016 1403 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Lamc1P02468 1607 aaKnown RBP5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Samd9lQ69Z37 1561 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Lemd3Q9WU40 921 aa5.73□□□□□ -1.49
Prkdc-201ENSMUST00000023352 KnstrnQ9D9Z1 312 aaKnown RBP5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Fancd2Q80V62 1450 aa5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Rwdd1Q9CQK7 243 aa5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Fbxo2Q80UW2 297 aa5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Zmym3Q9JLM4 1370 aa5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 HnrnpuQ8VEK3 800 aaKnown RBP5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Gpatch8A2A6A1 1505 aa5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 SetQ9EQU5 289 aaKnown RBP5.72□□□□□ -1.49
Prkdc-201ENSMUST00000023352 SafbD3YXK2 937 aaKnown RBP5.71□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Plb1Q3TTY0 1478 aa5.71□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Gm14025A2AP89 1413 aa5.71□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Nup160Q9Z0W3 1402 aaKnown RBP5.71□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Chmp5Q9D7S9 219 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 AknaQ80VW7 1404 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cul7Q8VE73 1689 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Plekhh1Q80TI1 1356 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Sbno1Q689Z5 1390 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 AnkarA2RT91 1465 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Gprasp1Q5U4C1 1347 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Casc1Q6TDU8 730 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 PtprgQ05909 1442 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Polr3aB2RXC6 1390 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Pla2r1Q62028 1487 aa5.71□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Trak1Q6PD31 939 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rad54l2Q99NG0 1466 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Abcc5Q9R1X5 1436 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 HdgfP51859 237 aaKnown RBP5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cabp1Q9JLK7 227 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 A2mQ6GQT1 1474 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 PrkcshO08795 521 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Ralbp1Q62172 648 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Arhgap5P97393 1501 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Fkbp15Q6P9Q6 1216 aaKnown RBP5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Ncoa1P70365 1447 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Ipo8Q7TMY7 1010 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Hecw1Q8K4P8 1604 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Spag9Q58A65 1321 aaKnown RBP5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rundc1Q0VDN7 615 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 RdxP26043 583 aaKnown RBP5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Jph4Q80WT0 628 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Kdm3bQ6ZPY7 1562 aa5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Supt6hQ62383 1726 aaKnown RBP5.7□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Plcb2A3KGF7 1181 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rab3gap2Q8BMG7 1366 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cald1E9QA15 768 aaKnown RBP5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Dusp9Q7TNL7 452 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Gm6268A2A3U9 297 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Srcin1Q9QWI6 1250 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Tpm3-rs7D3Z2H9 248 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cd109Q8R422 1442 aa5.69□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cpsf1Q9EPU4 1441 aaKnown RBP5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Uggt2E9Q4X2 1504 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Lmod3E9QA62 571 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Trap1aP19473 224 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 ScaperF8VQ70 1398 aaKnown RBP5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Mapkbp1Q6NS57 1503 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Kif3aP28741 701 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Scaf1Q5U4C3 1256 aaKnown RBP5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rsph3aQ3UFY4 516 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Pes1Q9EQ61 584 aaKnown RBP5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Cspp1B2RX88 1205 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Washc2Q6PGL7 1334 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 NgefQ8CHT1 710 aa5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rangap1P46061 589 aaKnown RBP5.68□□□□□ -1.5
Prkdc-201ENSMUST00000023352 RalgapbQ8BQZ4 1484 aa5.67□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Ylpm1Q9R0I7 1386 aaKnown RBP5.67□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rrp7aQ9D1C9 280 aaKnown RBP5.67□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Ccdc173A0JLY1 547 aa5.67□□□□□ -1.5
Prkdc-201ENSMUST00000023352 3425401B19RikD3Z1D3 1412 aa5.67□□□□□ -1.5
Prkdc-201ENSMUST00000023352 Rab11fip3Q8CHD8 1047 aa5.67□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms