RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Lmod3E9QA62 571 aa6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 PnisrA2AJT4 805 aaKnown RBP6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Ksr2Q3UVC0 959 aa6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Mre11Q61216 706 aa6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 PhaxQ9JJT9 385 aaKnown RBP6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Exoc6Q8R313 802 aa6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Irx6Q9ER75 438 aa6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Sart1Q9Z315 806 aaKnown RBP6.84□□□□□ -1.31
Vps13d-201ENSMUST00000020441 Dnttip2Q8R2M2 758 aaKnown RBP6.84□□□□□ -1.32
Vps13d-201ENSMUST00000020441 GsdmaQ9EST1 446 aa6.84□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Kif3aP28741 701 aa6.84□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Rassf8Q8CJ96 419 aa6.84□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tmco5bQ80X59 307 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 NrkQ9R0G8 1455 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Cplx2P84086 134 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Cetn4Q8K4K1 168 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 1700019A02RikA0A087WPV9 146 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Trim58Q5NCC9 485 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Becn1O88597 448 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Usp47Q8BY87 1376 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Jph4Q80WT0 628 aa6.83□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Filip1lQ6P6L0 1131 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tpm4Q6IRU2 248 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Ush1cQ9ES64 910 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Ift140E9PY46 1464 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Fam184bQ0KK56 942 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Stk26Q99JT2 416 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Stk31Q99MW1 1018 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Hook1Q8BIL5 728 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Dhx29Q6PGC1 1365 aaKnown RBP6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Ccdc171E9Q1U1 1324 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Rnf20Q5DTM8 973 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Cnga1P29974 684 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tpm1P58771 284 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Pabpn1Q8CCS6 302 aaKnown RBP6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Ylpm1Q9R0I7 1386 aaKnown RBP6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 UvssaQ9D479 717 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Rock1P70335 1354 aa6.82□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tpm2P58774 284 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Mcm2P97310 904 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Map3k1P53349 1493 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Top2aQ01320 1528 aaKnown RBP6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Gm38655A0A286YDK6 273 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Utp14aQ640M1 767 aaKnown RBP6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tnnt2P50752 301 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 B4galnt3Q6L8S8 986 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 U2surpQ6NV83 1029 aaKnown RBP6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Dbr1Q923B1 550 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Erich6bQ9D4S6 220 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Gnl3lQ6PGG6 577 aaKnown RBP6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Kif16bB1AVY7 1312 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Hap1O35668 628 aa6.81□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tceal9Q9DD24 104 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Kif7B7ZNG0 1348 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Vps8Q0P5W1 1427 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Dapk1Q80YE7 1442 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Ccer1Q9CQL2 403 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tsen2Q6P7W5 460 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Fam163aQ8CAA5 168 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Cecr2E9Q2Z1 1453 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Casq1O09165 405 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Pank3Q8R2W9 370 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Cchcr1Q8K2I2 770 aa6.8□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Arhgap31A6X8Z5 1425 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tpm3P21107 285 aaKnown RBP6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 VgfQ0VGU4 617 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Iqgap2Q3UQ44 1575 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Gsto1O09131 240 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tubb6Q922F4 447 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Arid3cA6PWV5 409 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tpd52l1O54818 204 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Shroom4Q1W617 1475 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Pcmtd1P59913 357 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Tnnt1O88346 262 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Slc4a1apE9PX68 744 aa6.79□□□□□ -1.32
Vps13d-201ENSMUST00000020441 ErbinQ80TH2 1402 aa6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Cc2d2bA0A286YDU8 1405 aa6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Birc3O08863 600 aa6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 KinQ8K339 391 aa6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Mfap1aC0HKD8 439 aaKnown RBP6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Mfap1bC0HKD9 439 aaKnown RBP6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Fan1Q69ZT1 1020 aa6.78□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Gm21969J3QJZ1 289 aa6.77□□□□□ -1.32
Vps13d-201ENSMUST00000020441 Isy1Q69ZQ2 285 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Nap1l3Q794H2 544 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Soga1E1U8D0 1418 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Lrrcc1Q69ZB0 1026 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 DroshaQ5HZJ0 1373 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Ipo7Q9EPL8 1038 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Gnai1B2RSH2 354 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Usp40Q8BWR4 1235 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Gnai3Q9DC51 354 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Zrsr2Q62377 462 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Prkrip1Q9CWV6 186 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Hmgn5Q9JL35 406 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 G3bp1P97855 465 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Erc2Q6PH08 957 aa6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Psma5Q9Z2U1 241 aaKnown RBP6.77□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Swt1Q9DBQ9 907 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Il16O54824 1322 aa6.76□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms