RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YHI9P38765 294 aa3.76□□□□□ -1.81
SNF8YPL002C CAB2P40506 365 aa3.76□□□□□ -1.81
SNF8YPL002C ECO1P43605 281 aa3.76□□□□□ -1.81
SNF8YPL002C LIA1P47120 325 aaKnown RBP3.76□□□□□ -1.81
SNF8YPL002C SDT1P53078 280 aa3.76□□□□□ -1.81
SNF8YPL002C CDC123Q05791 360 aa3.76□□□□□ -1.81
SNF8YPL002C RKM1Q08961 583 aaPredicted RBP3.76□□□□□ -1.81
SNF8YPL002C LEU4P06208 619 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C YFL068WP0CX99 160 aa3.75□□□□□ -1.81
SNF8YPL002C YLL066W-AP0CY00 160 aa3.75□□□□□ -1.81
SNF8YPL002C YLL067W-AP0CY01 160 aa3.75□□□□□ -1.81
SNF8YPL002C SAN1P22470 610 aa3.75□□□□□ -1.81
SNF8YPL002C ERG8P24521 451 aa3.75□□□□□ -1.81
SNF8YPL002C URA7P28274 579 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C CRM1P30822 1084 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C YEL043WP32618 956 aa3.75□□□□□ -1.81
SNF8YPL002C MAL32P38158 584 aa3.75□□□□□ -1.81
SNF8YPL002C YBR138CP38277 524 aa3.75□□□□□ -1.81
SNF8YPL002C VBA2P38358 474 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C EMP65P40085 556 aa3.75□□□□□ -1.81
SNF8YPL002C YJL068CP40363 299 aa3.75□□□□□ -1.81
SNF8YPL002C ARF3P40994 183 aaRIP-Chip data3.75□□□□□ -1.81not detected
SNF8YPL002C MAD3P47074 515 aa3.75□□□□□ -1.81
SNF8YPL002C UPF3P48412 387 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C SLD3P53135 668 aa3.75□□□□□ -1.81
SNF8YPL002C YGR067CP53243 804 aa3.75□□□□□ -1.81
SNF8YPL002C PXR1P53335 271 aaPredicted RBP3.75□□□□□ -1.81
SNF8YPL002C MKC7P53379 596 aa3.75□□□□□ -1.81
SNF8YPL002C LSM3P57743 89 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C GTR1Q00582 310 aa3.75□□□□□ -1.81
SNF8YPL002C CIK1Q01649 594 aa3.75□□□□□ -1.81
SNF8YPL002C ATG21Q02887 496 aa3.75□□□□□ -1.81
SNF8YPL002C CGI121Q03705 181 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C APC4Q04601 652 aa3.75□□□□□ -1.81
SNF8YPL002C YEH1Q07804 573 aa3.75□□□□□ -1.81
SNF8YPL002C RRP40Q08285 240 aaKnown RBP3.75□□□□□ -1.81
SNF8YPL002C ESA1Q08649 445 aa3.75□□□□□ -1.81
SNF8YPL002C SKS1Q12505 502 aa3.75□□□□□ -1.81
SNF8YPL002C YOR019WQ99248 730 aa3.75□□□□□ -1.81
SNF8YPL002C SSC1P0CS90 654 aaKnown RBP3.74□□□□□ -1.81
SNF8YPL002C GPA2P10823 449 aa3.74□□□□□ -1.81
SNF8YPL002C GUK1P15454 187 aaKnown RBP3.74□□□□□ -1.81
SNF8YPL002C PHO81P17442 1178 aa3.74□□□□□ -1.81
SNF8YPL002C CKI1P20485 582 aa3.74□□□□□ -1.81
SNF8YPL002C OCA4P25366 362 aa3.74□□□□□ -1.81
SNF8YPL002C PTC6P25646 442 aa3.74□□□□□ -1.81
SNF8YPL002C YUH1P35127 236 aa3.74□□□□□ -1.81
SNF8YPL002C GRE3P38715 327 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
SNF8YPL002C YDR089WP38966 869 aa3.74□□□□□ -1.81
SNF8YPL002C SSP120P39931 234 aaKnown RBP3.74□□□□□ -1.81
SNF8YPL002C VRG4P40107 337 aa3.74□□□□□ -1.81
SNF8YPL002C YIL169CP40442 995 aa3.74□□□□□ -1.81
SNF8YPL002C HIS6P40545 261 aa3.74□□□□□ -1.81
SNF8YPL002C EMC2P47133 292 aaKnown RBP3.74□□□□□ -1.81
SNF8YPL002C STE24P47154 453 aa3.74□□□□□ -1.81
SNF8YPL002C YJR141WP47172 347 aaPredicted RBP3.74□□□□□ -1.81
SNF8YPL002C TOM22P49334 152 aa3.74□□□□□ -1.81
SNF8YPL002C RPM2Q02773 1202 aa3.74□□□□□ -1.81
SNF8YPL002C SKI8Q02793 397 aaPredicted RBP3.74□□□□□ -1.81
SNF8YPL002C TAF12Q03761 539 aa3.74□□□□□ -1.81
SNF8YPL002C HPT1Q04178 221 aaKnown RBP3.74□□□□□ -1.81
SNF8YPL002C YPR174CQ06616 221 aaPredicted RBP3.74□□□□□ -1.81
SNF8YPL002C REX4Q08237 289 aa3.74□□□□□ -1.81
SNF8YPL002C YFR010W-AP0C5N0 62 aa3.73□□□□□ -1.81
SNF8YPL002C RPL42AP0CX27 106 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C RPL42BP0CX28 106 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C DBP3P20447 523 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C TRX3P25372 127 aa3.73□□□□□ -1.81
SNF8YPL002C ERG9P29704 444 aa3.73□□□□□ -1.81
SNF8YPL002C RIM1P32445 135 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C PTM1P32857 523 aa3.73□□□□□ -1.81
SNF8YPL002C VPS21P36017 210 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C ARN1P38731 627 aa3.73□□□□□ -1.81
SNF8YPL002C GDI1P39958 451 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C UTP25P40498 721 aaKnown RBP3.73□□□□□ -1.81
SNF8YPL002C EFM4P40516 257 aa3.73□□□□□ -1.81
SNF8YPL002C YGR079WP53249 370 aa3.73□□□□□ -1.81
SNF8YPL002C MAL12P53341 584 aa3.73□□□□□ -1.81
SNF8YPL002C GOT1Q03554 138 aa3.73□□□□□ -1.81
SNF8YPL002C UTP21Q06078 939 aaPredicted RBP3.73□□□□□ -1.81
SNF8YPL002C PDR8Q06149 701 aa3.73□□□□□ -1.81
SNF8YPL002C YLR446WQ06204 433 aa3.73□□□□□ -1.81
SNF8YPL002C GSH2Q08220 491 aa3.73□□□□□ -1.81
SNF8YPL002C RUP1Q12242 671 aa3.73□□□□□ -1.81
SNF8YPL002C CMC2Q3E7A4 109 aa3.73□□□□□ -1.81
SNF8YPL002C BPH1P25356 2167 aa3.73□□□□□ -1.81
SNF8YPL002C HEM2P05373 342 aa3.72□□□□□ -1.81
SNF8YPL002C CDC36P06100 191 aaPredicted RBP3.72□□□□□ -1.81
SNF8YPL002C CMD1P06787 147 aaKnown RBP3.72□□□□□ -1.81
SNF8YPL002C ILV2P07342 687 aaKnown RBP3.72□□□□□ -1.81
SNF8YPL002C MSS18P08593 268 aa3.72□□□□□ -1.81
SNF8YPL002C YSF3P0C074 85 aaPredicted RBP3.72□□□□□ -1.81
SNF8YPL002C CBP4P37267 147 aa3.72□□□□□ -1.81
SNF8YPL002C DTR1P38125 572 aa3.72□□□□□ -1.81
SNF8YPL002C POP7P38291 140 aa3.72□□□□□ -1.81
SNF8YPL002C YRB2P40517 327 aa3.72□□□□□ -1.81
SNF8YPL002C IAH1P41734 238 aa3.72□□□□□ -1.81
SNF8YPL002C MIC19P43594 170 aa3.72□□□□□ -1.81
SNF8YPL002C GCD14P46959 383 aaPredicted RBP3.72□□□□□ -1.81
SNF8YPL002C MNN5P46982 586 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms