RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W RPS16BP0CX52 143 aaKnown RBP2.49□□□□□ -2.01
VPS38YLR360W DAD2P36162 133 aa2.49□□□□□ -2.01
VPS38YLR360W SLX1P38324 304 aa2.49□□□□□ -2.01
VPS38YLR360W SLF1Q12034 447 aaKnown RBP2.49□□□□□ -2.01
VPS38YLR360W SLM3Q12093 417 aa2.49□□□□□ -2.01
VPS38YLR360W YPS3Q12303 508 aa2.49□□□□□ -2.01
VPS38YLR360W YOR012WQ12351 137 aa2.49□□□□□ -2.01
VPS38YLR360W YAL067W-AQ8TGK6 75 aa2.49□□□□□ -2.01
VPS38YLR360W MAS1P10507 462 aa2.48□□□□□ -2.01
VPS38YLR360W BGL2P15703 313 aaKnown RBP2.48□□□□□ -2.01
VPS38YLR360W CKI1P20485 582 aa2.48□□□□□ -2.01
VPS38YLR360W FAR1P21268 830 aa2.48□□□□□ -2.01
VPS38YLR360W TPS2P31688 896 aaKnown RBP2.48□□□□□ -2.01
VPS38YLR360W RCK2P38623 610 aa2.48□□□□□ -2.01
VPS38YLR360W ATG7P38862 630 aa2.48□□□□□ -2.01
VPS38YLR360W YNL320WP42840 284 aa2.48□□□□□ -2.01
VPS38YLR360W YMR310CQ04867 317 aaPredicted RBP2.48□□□□□ -2.01
VPS38YLR360W MRX8Q05473 314 aa2.48□□□□□ -2.01
VPS38YLR360W YOL029CQ08187 201 aa2.48□□□□□ -2.01
VPS38YLR360W AIM45Q12480 344 aaKnown RBP2.48□□□□□ -2.01
VPS38YLR360W FLO11P08640 1367 aa2.48□□□□□ -2.01
VPS38YLR360W AUS1Q08409 1394 aa2.48□□□□□ -2.01
VPS38YLR360W THR4P16120 514 aaKnown RBP2.47□□□□□ -2.01
VPS38YLR360W URA10P30402 227 aa2.47□□□□□ -2.01
VPS38YLR360W GGC1P38988 300 aa2.47□□□□□ -2.01
VPS38YLR360W FRT2P39734 528 aa2.47□□□□□ -2.01
VPS38YLR360W EFM3P47163 339 aa2.47□□□□□ -2.01
VPS38YLR360W SUR7P54003 302 aa2.47□□□□□ -2.01
VPS38YLR360W UTP6Q02354 440 aaKnown RBP2.47□□□□□ -2.01
VPS38YLR360W RCF1Q03713 159 aa2.47□□□□□ -2.01
VPS38YLR360W API2Q04413 109 aa2.47□□□□□ -2.01
VPS38YLR360W NAT4Q04751 285 aa2.47□□□□□ -2.01
VPS38YLR360W YPR195CQ06594 109 aa2.47□□□□□ -2.01
VPS38YLR360W APC5Q08683 685 aa2.47□□□□□ -2.01
VPS38YLR360W SKS1Q12505 502 aa2.47□□□□□ -2.01
VPS38YLR360W ARF2P19146 181 aaKnown RBP2.46□□□□□ -2.02
VPS38YLR360W GRR1P24814 1151 aa2.46□□□□□ -2.02
VPS38YLR360W MKK1P32490 508 aa2.46□□□□□ -2.02
VPS38YLR360W PRY2P36110 329 aa2.46□□□□□ -2.02
VPS38YLR360W DBP7P36120 742 aaKnown RBP2.46□□□□□ -2.02
VPS38YLR360W PCH2P38126 564 aa2.46□□□□□ -2.02
VPS38YLR360W RPA34P47006 233 aaPredicted RBP2.46□□□□□ -2.02
VPS38YLR360W HST4P53688 370 aa2.46□□□□□ -2.02
VPS38YLR360W MMT2Q08970 484 aa2.46□□□□□ -2.02
VPS38YLR360W FUS3P16892 353 aaKnown RBP2.45□□□□□ -2.02
VPS38YLR360W PHO84P25297 587 aaKnown RBP2.45□□□□□ -2.02
VPS38YLR360W MXR2P25566 168 aa2.45□□□□□ -2.02
VPS38YLR360W RDS1P25611 832 aa2.45□□□□□ -2.02
VPS38YLR360W HMX1P32339 317 aa2.45□□□□□ -2.02
VPS38YLR360W YKL071WP36086 256 aa2.45□□□□□ -2.02
VPS38YLR360W ADH5P38113 351 aaKnown RBP2.45□□□□□ -2.02
VPS38YLR360W YIR035CP40579 254 aa2.45□□□□□ -2.02
VPS38YLR360W NRM1P53718 249 aa2.45□□□□□ -2.02
VPS38YLR360W SED5Q01590 340 aa2.45□□□□□ -2.02
VPS38YLR360W ARR1Q06596 294 aa2.45□□□□□ -2.02
VPS38YLR360W SFG1Q12507 346 aa2.45□□□□□ -2.02
VPS38YLR360W STE3P06783 470 aa2.44□□□□□ -2.02
VPS38YLR360W MRPS5P33759 307 aa2.44□□□□□ -2.02
VPS38YLR360W IST2P38250 946 aa2.44□□□□□ -2.02
VPS38YLR360W YHC3P47040 408 aa2.44□□□□□ -2.02
VPS38YLR360W ALE1Q08548 619 aa2.44□□□□□ -2.02
VPS38YLR360W RFM1Q12192 310 aa2.44□□□□□ -2.02
VPS38YLR360W RAD23P32628 398 aaKnown RBP2.43□□□□□ -2.02
VPS38YLR360W SKG6P32900 734 aaPredicted RBP2.43□□□□□ -2.02
VPS38YLR360W LAS1P36146 502 aaPredicted RBP2.43□□□□□ -2.02
VPS38YLR360W TAE1P38340 232 aa2.43□□□□□ -2.02
VPS38YLR360W HIT1P46973 164 aa2.43□□□□□ -2.02
VPS38YLR360W LSG1P53145 640 aaKnown RBP2.43□□□□□ -2.02
VPS38YLR360W YNL143CP53908 130 aa2.43□□□□□ -2.02
VPS38YLR360W SCS7Q03529 384 aa2.43□□□□□ -2.02
VPS38YLR360W CSM3Q04659 317 aa2.43□□□□□ -2.02
VPS38YLR360W HSP82P02829 709 aaKnown RBP2.42□□□□□ -2.02
VPS38YLR360W SAG1P20840 650 aa2.42□□□□□ -2.02
VPS38YLR360W UTR1P21373 530 aa2.42□□□□□ -2.02
VPS38YLR360W IML3P38265 245 aa2.42□□□□□ -2.02
VPS38YLR360W TRR2P38816 342 aa2.42□□□□□ -2.02
VPS38YLR360W UFE1P41834 346 aa2.42□□□□□ -2.02
VPS38YLR360W YCH1P42937 148 aa2.42□□□□□ -2.02
VPS38YLR360W YFR018CP43599 363 aa2.42□□□□□ -2.02
VPS38YLR360W AQR1P53943 586 aa2.42□□□□□ -2.02
VPS38YLR360W TAF10Q12030 206 aa2.42□□□□□ -2.02
VPS38YLR360W NFI1Q12216 726 aa2.42□□□□□ -2.02
VPS38YLR360W BI3Q9ZZW7 517 aa2.42□□□□□ -2.02
VPS38YLR360W YLL053CP0CD98 152 aa2.42□□□□□ -2.02
VPS38YLR360W HXT2P23585 541 aa2.42□□□□□ -2.02
VPS38YLR360W TIP20P33891 701 aa2.42□□□□□ -2.02
VPS38YLR360W AST1P35183 429 aa2.42□□□□□ -2.02
VPS38YLR360W FRM2P37261 193 aa2.42□□□□□ -2.02
VPS38YLR360W INP2Q03824 705 aa2.42□□□□□ -2.02
VPS38YLR360W RRB1Q04225 511 aaKnown RBP2.42□□□□□ -2.02
VPS38YLR360W UTP15Q04305 513 aaKnown RBP2.42□□□□□ -2.02
VPS38YLR360W YDL211CQ12121 372 aa2.42□□□□□ -2.02
VPS38YLR360W RPN6Q12377 434 aa2.42□□□□□ -2.02
VPS38YLR360W RAD1P06777 1100 aa2.41□□□□□ -2.02
VPS38YLR360W CKA2P19454 339 aa2.41□□□□□ -2.02
VPS38YLR360W COX10P21592 462 aa2.41□□□□□ -2.02
VPS38YLR360W CYM1P32898 989 aa2.41□□□□□ -2.02
VPS38YLR360W EFM1P38732 585 aa2.41□□□□□ -2.02
VPS38YLR360W CUE3P53137 624 aaKnown RBP2.41□□□□□ -2.02
VPS38YLR360W INP1Q03694 420 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms