RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	YEL073C	P39974	107 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	QDR1	P40475	563 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	LYS12	P40495	371 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	TIR3	P40552	269 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	MAD2	P40958	196 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	BAT2	P47176	376 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	PYK2	P52489	506 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	PMT5	P52867	743 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	YGR079W	P53249	370 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	SAY1	P53324	424 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	BTS1	Q12051	335 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	PER33	Q12144	273 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	FRE6	Q12473	712 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	FSH3	Q99369	266 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	TDH1	P00360	332 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	DPM1	P14020	267 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	CKS1	P20486	150 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	RNA14	P25298	677 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	SFA1	P32771	386 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	ECM31	P38122	312 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	IML3	P38265	245 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	NSG1	P38837	291 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	CHL4	P38907	458 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	TIM17	P39515	158 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	GIM4	P40005	111 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	FAU1	P40099	211 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	YIR016W	P40572	265 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	PHB1	P40961	287 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	CIN1	P40987	1014 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	MRPS18	P42847	217 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	MTL1	P53214	551 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	CAF40	P53829	373 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	YMR315W	Q04869	349 aa	Known RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	RSF1	Q05043	376 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	DCR2	Q05924	578 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	BOP2	Q06150	570 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	DXO1	Q06349	442 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	YOR289W	Q12012	251 aa	Predicted RBP	4.16	□□□□□ -1.74
NUP2	YLR335W	YLR099W-A	Q3E798	87 aa		4.16	□□□□□ -1.74
NUP2	YLR335W	COX9	P07255	59 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	RPS21A	P0C0V8	87 aa	Known RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	FUS3	P16892	353 aa	Known RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	ARF2	P19146	181 aa	Known RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	RPA135	P22138	1203 aa	Known RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
NUP2	YLR335W	LDS1	P31379	325 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	FUN26	P31381	517 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	SSH4	P32343	579 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	ISF1	P32488	338 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	SRB6	P32570	121 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	PDC2	P32896	925 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	PXA2	P34230	853 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	GMH1	P36125	273 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	CBP4	P37267	147 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	PAU24	P38155	120 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	FET3	P38993	636 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	PFA3	P42836	336 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	FAA4	P47912	694 aa	Known RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	UBC9	P50623	157 aa	Predicted RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	VPS73	P53142	486 aa	Known RBP	4.15	□□□□□ -1.75
NUP2	YLR335W	HHO1	P53551	258 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	DCS1	Q06151	350 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	YPQ1	Q12010	308 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	ATG41	Q12048	136 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	TPO4	Q12256	659 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	PRM4	Q12498	284 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	YDR524C-B	Q3E6R4	66 aa		4.15	□□□□□ -1.75
NUP2	YLR335W	RPS18A	P0CX55	146 aa	Known RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	RPS18B	P0CX56	146 aa	Predicted RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	PRP2	P20095	876 aa	Predicted RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	PUP1	P25043	261 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	NAM9	P27929	486 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	PMT2	P31382	759 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	COQ2	P32378	372 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	CDC12	P32468	407 aa	Known RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	SKN1	P33336	771 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	KKQ8	P36004	724 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	SRO77	P38163	1010 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	YBR238C	P38330	731 aa	Known RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	OSH7	P38755	437 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	HTD2	P38790	280 aa	Known RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	FAA3	P39002	694 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	HEM14	P40012	539 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	YIL165C	P40446	119 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	ICE2	P40499	491 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	APQ12	P40532	138 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	ALK1	P43633	760 aa	Known RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	PHB2	P50085	310 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	HOS2	P53096	452 aa	Predicted RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	SLI1	P53304	468 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	YNL034W	P53963	612 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	YMR310C	Q04867	317 aa	Predicted RBP	4.14	□□□□□ -1.75
NUP2	YLR335W	XYL2	Q07993	356 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	PLB3	Q08108	686 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	ZEO1	Q08245	113 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	YPR022C	Q12139	1133 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	YLR108C	Q12259	485 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	RDI1	Q12434	202 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	HCM1	P25364	564 aa		4.14	□□□□□ -1.75
NUP2	YLR335W	RFA2	P26754	273 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms