RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C GLE1Q12315 538 aa3.46□□□□□ -1.86
USB1YLR132C WTM1Q12363 437 aaKnown RBP3.46□□□□□ -1.86
USB1YLR132C IZH2Q12442 317 aa3.46□□□□□ -1.86
USB1YLR132C YCR024C-BQ3E7Z8 88 aa3.46□□□□□ -1.86
USB1YLR132C RNA1P11745 407 aaKnown RBP3.45□□□□□ -1.86
USB1YLR132C DPH5P32469 300 aaPredicted RBP3.45□□□□□ -1.86
USB1YLR132C EFB1P32471 206 aaKnown RBP3.45□□□□□ -1.86
USB1YLR132C TIR2P33890 251 aa3.45□□□□□ -1.86
USB1YLR132C TVP23P38962 199 aa3.45□□□□□ -1.86
USB1YLR132C YNL208WP40159 199 aaKnown RBP3.45□□□□□ -1.86
USB1YLR132C AIP1P46680 615 aaKnown RBP3.45□□□□□ -1.86
USB1YLR132C YJR085CP47131 105 aaKnown RBP3.45□□□□□ -1.86
USB1YLR132C MST27P53176 234 aa3.45□□□□□ -1.86
USB1YLR132C SPH1Q06160 661 aa3.45□□□□□ -1.86
USB1YLR132C CMS1Q07897 291 aaKnown RBP3.45□□□□□ -1.86
USB1YLR132C HRT3Q12347 344 aa3.45□□□□□ -1.86
USB1YLR132C PCL9Q12477 304 aa3.45□□□□□ -1.86
USB1YLR132C ADH2P00331 348 aaKnown RBP3.44□□□□□ -1.86
USB1YLR132C SCH9P11792 824 aaKnown RBP3.44□□□□□ -1.86
USB1YLR132C MAS2P11914 482 aa3.44□□□□□ -1.86
USB1YLR132C DAL5P15365 543 aa3.44□□□□□ -1.86
USB1YLR132C PSO2P30620 661 aa3.44□□□□□ -1.86
USB1YLR132C MSK1P32048 576 aa3.44□□□□□ -1.86
USB1YLR132C GPX2P38143 162 aa3.44□□□□□ -1.86
USB1YLR132C YHK8P38776 514 aa3.44□□□□□ -1.86
USB1YLR132C LYS12P40495 371 aaKnown RBP3.44□□□□□ -1.86
USB1YLR132C BIR1P47134 954 aa3.44□□□□□ -1.86
USB1YLR132C CWC22P53333 577 aaKnown RBP3.44□□□□□ -1.86
USB1YLR132C YNR068CP53754 272 aa3.44□□□□□ -1.86
USB1YLR132C AQR1P53943 586 aa3.44□□□□□ -1.86
USB1YLR132C TDA1Q03533 586 aa3.44□□□□□ -1.86
USB1YLR132C DBP9Q06218 594 aaKnown RBP3.44□□□□□ -1.86
USB1YLR132C YPR091CQ06833 770 aa3.44□□□□□ -1.86
USB1YLR132C FDH1Q08911 376 aa3.44□□□□□ -1.86
USB1YLR132C HMS1Q12398 434 aa3.44□□□□□ -1.86
USB1YLR132C YLR422WQ06409 1932 aa3.44□□□□□ -1.86
USB1YLR132C TOR2P32600 2474 aaKnown RBP3.44□□□□□ -1.86
USB1YLR132C CCH1P50077 2039 aa3.43□□□□□ -1.86
USB1YLR132C DAP2P18962 818 aa3.43□□□□□ -1.86
USB1YLR132C RDS1P25611 832 aa3.43□□□□□ -1.86
USB1YLR132C SMI1P32566 505 aa3.43□□□□□ -1.86
USB1YLR132C YHR177WP38867 453 aa3.43□□□□□ -1.86
USB1YLR132C AIM10P39965 576 aaKnown RBP3.43□□□□□ -1.86
USB1YLR132C ALD5P40047 520 aaKnown RBP3.43□□□□□ -1.86
USB1YLR132C SEC9P40357 651 aa3.43□□□□□ -1.86
USB1YLR132C SEC27P41811 889 aaKnown RBP3.43□□□□□ -1.86
USB1YLR132C CUE3P53137 624 aaKnown RBP3.43□□□□□ -1.86
USB1YLR132C YGR016WP53209 190 aa3.43□□□□□ -1.86
USB1YLR132C SHY1P53266 389 aa3.43□□□□□ -1.86
USB1YLR132C RRN9P53437 365 aa3.43□□□□□ -1.86
USB1YLR132C PRM1P53835 661 aa3.43□□□□□ -1.86
USB1YLR132C YMR310CQ04867 317 aaPredicted RBP3.43□□□□□ -1.86
USB1YLR132C YDL114WQ07530 308 aa3.43□□□□□ -1.86
USB1YLR132C NOP6Q07623 225 aaKnown RBP3.43□□□□□ -1.86
USB1YLR132C FCY22Q12119 530 aa3.43□□□□□ -1.86
USB1YLR132C RPL40AP0CH08 128 aaKnown RBP3.42□□□□□ -1.86
USB1YLR132C RPL40BP0CH09 128 aaKnown RBP3.42□□□□□ -1.86
USB1YLR132C THR4P16120 514 aaKnown RBP3.42□□□□□ -1.86
USB1YLR132C ISY1P21374 235 aaPredicted RBP3.42□□□□□ -1.86
USB1YLR132C AAT2P23542 418 aaKnown RBP3.42□□□□□ -1.86
USB1YLR132C HMX1P32339 317 aa3.42□□□□□ -1.86
USB1YLR132C SWD3P38123 315 aa3.42□□□□□ -1.86
USB1YLR132C SHS1Q07657 551 aa3.42□□□□□ -1.86
USB1YLR132C PLP2Q12017 286 aa3.42□□□□□ -1.86
USB1YLR132C MAS1P10507 462 aa3.41□□□□□ -1.86
USB1YLR132C TAL1P15019 335 aaKnown RBP3.41□□□□□ -1.86
USB1YLR132C ADH5P38113 351 aaKnown RBP3.41□□□□□ -1.86
USB1YLR132C SIF2P38262 535 aa3.41□□□□□ -1.86
USB1YLR132C RTC2P38279 296 aa3.41□□□□□ -1.86
USB1YLR132C YHR182WP38870 785 aa3.41□□□□□ -1.86
USB1YLR132C PES4P39684 611 aa3.41□□□□□ -1.86
USB1YLR132C DFG10P40526 253 aa3.41□□□□□ -1.86
USB1YLR132C TOS2P50078 622 aa3.41□□□□□ -1.86
USB1YLR132C SHE10P53075 577 aa3.41□□□□□ -1.86
USB1YLR132C CRH1P53301 507 aa3.41□□□□□ -1.86
USB1YLR132C RET3P53600 189 aa3.41□□□□□ -1.86
USB1YLR132C YNL143CP53908 130 aa3.41□□□□□ -1.86
USB1YLR132C RRB1Q04225 511 aaKnown RBP3.41□□□□□ -1.86
USB1YLR132C YOR338WQ99326 363 aa3.41□□□□□ -1.86
USB1YLR132C FSH3Q99369 266 aa3.41□□□□□ -1.86
USB1YLR132C LDB16P25587 256 aa3.4□□□□□ -1.87
USB1YLR132C SSE1P32589 693 aaKnown RBP3.4□□□□□ -1.87
USB1YLR132C TOA2P32774 122 aa3.4□□□□□ -1.87
USB1YLR132C OXA1P39952 402 aa3.4□□□□□ -1.87
USB1YLR132C PRE5P40302 234 aaKnown RBP3.4□□□□□ -1.87
USB1YLR132C UTP18P40362 594 aaPredicted RBP3.4□□□□□ -1.87
USB1YLR132C COS1P53822 381 aa3.4□□□□□ -1.87
USB1YLR132C UTP6Q02354 440 aaKnown RBP3.4□□□□□ -1.87
USB1YLR132C NAG1Q8TGN9 163 aa3.4□□□□□ -1.87
USB1YLR132C NCB2Q92317 146 aa3.4□□□□□ -1.87
USB1YLR132C COQ1P18900 473 aa3.39□□□□□ -1.87
USB1YLR132C TRX1P22217 103 aaKnown RBP3.39□□□□□ -1.87
USB1YLR132C YEL043WP32618 956 aa3.39□□□□□ -1.87
USB1YLR132C ANP1P32629 500 aa3.39□□□□□ -1.87
USB1YLR132C SLX1P38324 304 aa3.39□□□□□ -1.87
USB1YLR132C VPS45P38932 577 aa3.39□□□□□ -1.87
USB1YLR132C TRF5P48561 642 aaKnown RBP3.39□□□□□ -1.87
USB1YLR132C LIP2Q06005 328 aa3.39□□□□□ -1.87
USB1YLR132C SUE1Q06524 206 aa3.39□□□□□ -1.87
USB1YLR132C PGC1Q08959 321 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms