RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A FAR1P21268 830 aa0.19□□□□□ -2.38
SDH6YDR379C-A ZRT3P34240 503 aa0.19□□□□□ -2.38
SDH6YDR379C-A MOB2P43563 287 aa0.19□□□□□ -2.38
SDH6YDR379C-A IRC6P43615 237 aa0.19□□□□□ -2.38
SDH6YDR379C-A CAX4P53223 239 aa0.19□□□□□ -2.38
SDH6YDR379C-A YMR244WQ04018 355 aa0.19□□□□□ -2.38
SDH6YDR379C-A UBX2Q04228 584 aa0.19□□□□□ -2.38
SDH6YDR379C-A URC2Q04411 772 aa0.19□□□□□ -2.38
SDH6YDR379C-A YDR341CQ05506 607 aaKnown RBP0.19□□□□□ -2.38
SDH6YDR379C-A NSE1Q07913 336 aa0.19□□□□□ -2.38
SDH6YDR379C-A RPN8Q08723 338 aaKnown RBP0.19□□□□□ -2.38
SDH6YDR379C-A ISN1Q99312 450 aa0.19□□□□□ -2.38
SDH6YDR379C-A VPS63O13549 108 aa0.18□□□□□ -2.38
SDH6YDR379C-A RNA1P11745 407 aaKnown RBP0.18□□□□□ -2.38
SDH6YDR379C-A MRP7P12687 371 aa0.18□□□□□ -2.38
SDH6YDR379C-A REC107P21651 314 aa0.18□□□□□ -2.38
SDH6YDR379C-A RRP7P25368 297 aaPredicted RBP0.18□□□□□ -2.38
SDH6YDR379C-A GFD2P25370 566 aaKnown RBP0.18□□□□□ -2.38
SDH6YDR379C-A ITR2P30606 609 aa0.18□□□□□ -2.38
SDH6YDR379C-A YKL071WP36086 256 aa0.18□□□□□ -2.38
SDH6YDR379C-A NOC2P39744 710 aaKnown RBP0.18□□□□□ -2.38
SDH6YDR379C-A YFR018CP43599 363 aa0.18□□□□□ -2.38
SDH6YDR379C-A DAN1P47178 298 aa0.18□□□□□ -2.38
SDH6YDR379C-A SUR7P54003 302 aa0.18□□□□□ -2.38
SDH6YDR379C-A INP1Q03694 420 aa0.18□□□□□ -2.38
SDH6YDR379C-A ROY1Q04847 553 aa0.18□□□□□ -2.38
SDH6YDR379C-A YLH47Q06493 454 aa0.18□□□□□ -2.38
SDH6YDR379C-A GAT3Q07928 141 aa0.18□□□□□ -2.38
SDH6YDR379C-A ALE1Q08548 619 aa0.18□□□□□ -2.38
SDH6YDR379C-A VPS68Q12016 184 aa0.18□□□□□ -2.38
SDH6YDR379C-A SLM3Q12093 417 aa0.18□□□□□ -2.38
SDH6YDR379C-A TY3A-GQ12173 290 aa0.18□□□□□ -2.38
SDH6YDR379C-A IES3Q12345 250 aa0.18□□□□□ -2.38
SDH6YDR379C-A TY3A-IQ99219 290 aa0.18□□□□□ -2.38
SDH6YDR379C-A RPS14AP06367 137 aaKnown RBP0.17□□□□□ -2.38
SDH6YDR379C-A MRPL8P22353 238 aa0.17□□□□□ -2.38
SDH6YDR379C-A SCO1P23833 295 aa0.17□□□□□ -2.38
SDH6YDR379C-A YCR051WP25631 222 aa0.17□□□□□ -2.38
SDH6YDR379C-A URA10P30402 227 aa0.17□□□□□ -2.38
SDH6YDR379C-A RIM1P32445 135 aaKnown RBP0.17□□□□□ -2.38
SDH6YDR379C-A NRP1P32770 719 aaKnown RBP RIP-Chip data0.17□□□□□ -2.38not detected
SDH6YDR379C-A CSE1P33307 960 aa0.17□□□□□ -2.38
SDH6YDR379C-A PEX5P35056 612 aa0.17□□□□□ -2.38
SDH6YDR379C-A CAB3P36076 571 aa0.17□□□□□ -2.38
SDH6YDR379C-A QDR3P38227 689 aa0.17□□□□□ -2.38
SDH6YDR379C-A ZTA1P38230 334 aaKnown RBP0.17□□□□□ -2.38
SDH6YDR379C-A SLM4P38247 162 aa0.17□□□□□ -2.38
SDH6YDR379C-A NAB3P38996 802 aaKnown RBP RIP-Chip data0.17□□□□□ -2.38 RIP-Chip
SDH6YDR379C-A RPS14BP39516 138 aaKnown RBP0.17□□□□□ -2.38
SDH6YDR379C-A YER188WP40103 239 aa0.17□□□□□ -2.38
SDH6YDR379C-A PAC11P40960 533 aa0.17□□□□□ -2.38
SDH6YDR379C-A MIG2P53035 382 aa0.17□□□□□ -2.38
SDH6YDR379C-A YGL118CP53132 145 aa0.17□□□□□ -2.38
SDH6YDR379C-A RTS3P53289 263 aa0.17□□□□□ -2.38
SDH6YDR379C-A BNI5P53890 448 aaKnown RBP0.17□□□□□ -2.38
SDH6YDR379C-A AQR1P53943 586 aa0.17□□□□□ -2.38
SDH6YDR379C-A YNL040WP53960 456 aaPredicted RBP0.17□□□□□ -2.38
SDH6YDR379C-A TRM82Q03774 444 aa0.17□□□□□ -2.38
SDH6YDR379C-A NOP6Q07623 225 aaKnown RBP0.17□□□□□ -2.38
SDH6YDR379C-A YHR086W-AQ3E746 53 aa0.17□□□□□ -2.38
SDH6YDR379C-A YRF1-4O13559 1382 aa0.17□□□□□ -2.38
SDH6YDR379C-A YOL163WP0CF20 169 aa0.16□□□□□ -2.38
SDH6YDR379C-A RED1P14291 827 aa0.16□□□□□ -2.38
SDH6YDR379C-A PHO91P27514 894 aa0.16□□□□□ -2.38
SDH6YDR379C-A YSC83P32792 385 aa0.16□□□□□ -2.38
SDH6YDR379C-A RFT1P38206 574 aaPredicted RBP0.16□□□□□ -2.38
SDH6YDR379C-A SMF2P38778 549 aa0.16□□□□□ -2.38
SDH6YDR379C-A SER3P40054 469 aa0.16□□□□□ -2.38
SDH6YDR379C-A SLM1P40485 686 aa0.16□□□□□ -2.38
SDH6YDR379C-A HIT1P46973 164 aa0.16□□□□□ -2.38
SDH6YDR379C-A DSK2P48510 373 aa0.16□□□□□ -2.38
SDH6YDR379C-A SDS23P53172 527 aa0.16□□□□□ -2.38
SDH6YDR379C-A FMP48P53233 369 aa0.16□□□□□ -2.38
SDH6YDR379C-A RTT102P53330 157 aa0.16□□□□□ -2.38
SDH6YDR379C-A ACT1P60010 375 aaKnown RBP0.16□□□□□ -2.38
SDH6YDR379C-A DCR2Q05924 578 aa0.16□□□□□ -2.38
SDH6YDR379C-A AAD15Q08361 143 aa0.16□□□□□ -2.38
SDH6YDR379C-A AEP3Q12089 606 aa0.16□□□□□ -2.38
SDH6YDR379C-A MED1Q12321 566 aa0.16□□□□□ -2.38
SDH6YDR379C-A TIM22Q12328 207 aa0.16□□□□□ -2.38
SDH6YDR379C-A YOR012WQ12351 137 aa0.16□□□□□ -2.38
SDH6YDR379C-A PGA3Q12746 312 aaKnown RBP0.16□□□□□ -2.38
SDH6YDR379C-A AFI1Q99222 893 aa0.16□□□□□ -2.38
SDH6YDR379C-A UBA3Q99344 299 aa0.16□□□□□ -2.38
SDH6YDR379C-A RPL26AP05743 127 aaKnown RBP0.15□□□□□ -2.39
SDH6YDR379C-A DAP2P18962 818 aa0.15□□□□□ -2.39
SDH6YDR379C-A YKL187CP34231 750 aa0.15□□□□□ -2.39
SDH6YDR379C-A FCY21P40039 528 aa0.15□□□□□ -2.39
SDH6YDR379C-A RPL26BP53221 127 aaKnown RBP0.15□□□□□ -2.39
SDH6YDR379C-A SSU72P53538 206 aaPredicted RBP0.15□□□□□ -2.39
SDH6YDR379C-A MRPL19P53875 158 aa0.15□□□□□ -2.39
SDH6YDR379C-A VPS72Q03388 795 aa0.15□□□□□ -2.39
SDH6YDR379C-A EBS1Q03466 884 aaKnown RBP0.15□□□□□ -2.39
SDH6YDR379C-A YMR166CQ03829 368 aa0.15□□□□□ -2.39
SDH6YDR379C-A RRB1Q04225 511 aaKnown RBP0.15□□□□□ -2.39
SDH6YDR379C-A TAF11Q04226 346 aa0.15□□□□□ -2.39
SDH6YDR379C-A YLR456WQ06199 204 aa0.15□□□□□ -2.39
SDH6YDR379C-A SHS1Q07657 551 aa0.15□□□□□ -2.39
SDH6YDR379C-A TRM10Q12400 293 aa0.15□□□□□ -2.39
SDH6YDR379C-A YAK1P14680 807 aa0.14□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms