RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C RRN9P53437 365 aa2.36□□□□□ -2.03
SHE4YOR035C LDS2Q08218 356 aa2.36□□□□□ -2.03
SHE4YOR035C FCY22Q12119 530 aa2.36□□□□□ -2.03
SHE4YOR035C PCL9Q12477 304 aa2.36□□□□□ -2.03
SHE4YOR035C RRP7P25368 297 aaPredicted RBP2.35□□□□□ -2.03
SHE4YOR035C MRP21P38175 177 aa2.35□□□□□ -2.03
SHE4YOR035C OM14P38325 134 aa2.35□□□□□ -2.03
SHE4YOR035C MLH1P38920 769 aa2.35□□□□□ -2.03
SHE4YOR035C JEM1P40358 645 aa2.35□□□□□ -2.03
SHE4YOR035C IPK1Q06667 281 aa2.35□□□□□ -2.03
SHE4YOR035C YBT1P32386 1661 aa2.35□□□□□ -2.03
SHE4YOR035C CDC50P25656 391 aa2.35□□□□□ -2.03
SHE4YOR035C YER186CP40101 306 aa2.35□□□□□ -2.03
SHE4YOR035C SRN2Q99176 213 aa2.35□□□□□ -2.03
SHE4YOR035C WSS1P38838 269 aa2.34□□□□□ -2.03
SHE4YOR035C PFS1P38872 237 aa2.34□□□□□ -2.03
SHE4YOR035C TIM17P39515 158 aa2.34□□□□□ -2.03
SHE4YOR035C SKI8Q02793 397 aaPredicted RBP2.34□□□□□ -2.03
SHE4YOR035C YMR010WQ03687 405 aa2.34□□□□□ -2.03
SHE4YOR035C YDL114WQ07530 308 aa2.34□□□□□ -2.03
SHE4YOR035C YDL199CQ12407 687 aa2.34□□□□□ -2.03
SHE4YOR035C MEX67Q99257 599 aaKnown RBP2.34□□□□□ -2.03
SHE4YOR035C PSK1P31374 1356 aa2.34□□□□□ -2.03
SHE4YOR035C YRF1-2P40105 1681 aa2.34□□□□□ -2.04
SHE4YOR035C YDR061WQ12298 539 aa2.34□□□□□ -2.04
SHE4YOR035C COX4P04037 155 aa2.33□□□□□ -2.04
SHE4YOR035C FUN26P31381 517 aa2.33□□□□□ -2.04
SHE4YOR035C TOA2P32774 122 aa2.33□□□□□ -2.04
SHE4YOR035C YHR177WP38867 453 aa2.33□□□□□ -2.04
SHE4YOR035C AIP1P46680 615 aaKnown RBP2.33□□□□□ -2.04
SHE4YOR035C REX2P54964 269 aaKnown RBP2.33□□□□□ -2.04
SHE4YOR035C MRPS16Q02608 121 aa2.33□□□□□ -2.04
SHE4YOR035C TOR1P35169 2470 aa2.33□□□□□ -2.04
SHE4YOR035C VMR1P38735 1592 aa2.33□□□□□ -2.04
SHE4YOR035C RNA1P11745 407 aaKnown RBP2.32□□□□□ -2.04
SHE4YOR035C SPO23P33757 523 aa2.32□□□□□ -2.04
SHE4YOR035C SEC27P41811 889 aaKnown RBP2.32□□□□□ -2.04
SHE4YOR035C ABM1P47146 123 aa2.32□□□□□ -2.04
SHE4YOR035C TRF5P48561 642 aaKnown RBP2.32□□□□□ -2.04
SHE4YOR035C HMS1Q12398 434 aa2.32□□□□□ -2.04
SHE4YOR035C SSN2P38931 1420 aa2.32□□□□□ -2.04
SHE4YOR035C ZRC1P20107 442 aa2.32□□□□□ -2.04
SHE4YOR035C GPI18P38211 433 aa2.32□□□□□ -2.04
SHE4YOR035C MLC1P53141 149 aa2.32□□□□□ -2.04
SHE4YOR035C MKC7P53379 596 aa2.32□□□□□ -2.04
SHE4YOR035C NOP6Q07623 225 aaKnown RBP2.32□□□□□ -2.04
SHE4YOR035C DNL4Q08387 944 aaPredicted RBP2.32□□□□□ -2.04
SHE4YOR035C PUP2P32379 260 aa2.31□□□□□ -2.04
SHE4YOR035C IGD1P43598 195 aa2.31□□□□□ -2.04
SHE4YOR035C VHS1Q03785 461 aa2.31□□□□□ -2.04
SHE4YOR035C YFH1Q07540 174 aa2.31□□□□□ -2.04
SHE4YOR035C IML1P47170 1584 aa2.31□□□□□ -2.04
SHE4YOR035C NUP157P40064 1391 aaKnown RBP2.31□□□□□ -2.04
SHE4YOR035C RPL6BP05739 176 aaKnown RBP2.31□□□□□ -2.04
SHE4YOR035C MID2P36027 376 aa2.31□□□□□ -2.04
SHE4YOR035C YBL028CP38202 106 aa2.31□□□□□ -2.04
SHE4YOR035C RXT2P38255 430 aa2.31□□□□□ -2.04
SHE4YOR035C RPL6AQ02326 176 aaKnown RBP2.31□□□□□ -2.04
SHE4YOR035C FOL3Q12676 427 aaPredicted RBP2.31□□□□□ -2.04
SHE4YOR035C SNQ2P32568 1501 aaKnown RBP2.31□□□□□ -2.04
SHE4YOR035C SMC4Q12267 1418 aa2.31□□□□□ -2.04
SHE4YOR035C NUP188P52593 1655 aaKnown RBP2.3□□□□□ -2.04
SHE4YOR035C PRB1P09232 635 aa2.3□□□□□ -2.04
SHE4YOR035C WSC4P38739 605 aa2.3□□□□□ -2.04
SHE4YOR035C YHC1Q05900 231 aaKnown RBP2.3□□□□□ -2.04
SHE4YOR035C MCH1Q07376 486 aa2.3□□□□□ -2.04
SHE4YOR035C PEX27Q08580 376 aa2.3□□□□□ -2.04
SHE4YOR035C RPS18AP0CX55 146 aaKnown RBP2.3□□□□□ -2.04
SHE4YOR035C RPS18BP0CX56 146 aaPredicted RBP2.3□□□□□ -2.04
SHE4YOR035C MRPL8P22353 238 aa2.3□□□□□ -2.04
SHE4YOR035C DEP1P31385 405 aa2.3□□□□□ -2.04
SHE4YOR035C GDT1P38301 280 aaPredicted RBP2.3□□□□□ -2.04
SHE4YOR035C LSM12P38828 187 aaKnown RBP2.3□□□□□ -2.04
SHE4YOR035C RCF1Q03713 159 aa2.3□□□□□ -2.04
SHE4YOR035C GAT3Q07928 141 aa2.3□□□□□ -2.04
SHE4YOR035C GCN2P15442 1659 aa2.3□□□□□ -2.04
SHE4YOR035C PDR11P40550 1411 aa2.3□□□□□ -2.04
SHE4YOR035C CMK2P22517 447 aa2.29□□□□□ -2.04
SHE4YOR035C GIT1P25346 518 aa2.29□□□□□ -2.04
SHE4YOR035C YGL262WP53054 175 aa2.29□□□□□ -2.04
SHE4YOR035C YPS5P53057 165 aa2.29□□□□□ -2.04
SHE4YOR035C KTR6P54070 446 aa2.29□□□□□ -2.04
SHE4YOR035C ENT5Q03769 411 aaKnown RBP2.29□□□□□ -2.04
SHE4YOR035C TFB5Q3E7C1 72 aaPredicted RBP2.29□□□□□ -2.04
SHE4YOR035C SEC7P11075 2009 aaKnown RBP2.29□□□□□ -2.04
SHE4YOR035C STE7P06784 515 aa2.29□□□□□ -2.04
SHE4YOR035C MSP1P28737 362 aa2.29□□□□□ -2.04
SHE4YOR035C PSO2P30620 661 aa2.29□□□□□ -2.04
SHE4YOR035C SOL2P37262 315 aa2.29□□□□□ -2.04
SHE4YOR035C SEC9P40357 651 aa2.29□□□□□ -2.04
SHE4YOR035C EOS1P53938 366 aa2.29□□□□□ -2.04
SHE4YOR035C MSC3Q05812 728 aa2.29□□□□□ -2.04
SHE4YOR035C SHS1Q07657 551 aa2.29□□□□□ -2.04
SHE4YOR035C MRPS9P38120 278 aa2.28□□□□□ -2.04
SHE4YOR035C YSW1P38280 609 aa2.28□□□□□ -2.04
SHE4YOR035C LYS12P40495 371 aaKnown RBP2.28□□□□□ -2.04
SHE4YOR035C SNL1P40548 159 aa2.28□□□□□ -2.04
SHE4YOR035C CWC22P53333 577 aaKnown RBP2.28□□□□□ -2.04
SHE4YOR035C FRE6Q12473 712 aa2.28□□□□□ -2.04
SHE4YOR035C SCH9P11792 824 aaKnown RBP2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms