RNA–Protein interactions for RNA: YMR154C

RIM13, Transcript of Calpain-like cysteine protease, yeast

Gene RIM13, Length 2,184 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM13	YMR154C	LCB3	P47013	409 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	NUP84	P52891	726 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	VPS60	Q03390	229 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	UBX2	Q04228	584 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	KRE28	Q04431	385 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	LOT6	Q07923	191 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	GAT3	Q07928	141 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	PEX27	Q08580	376 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	YCR024C-B	Q3E7Z8	88 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	SWI1	P09547	1314 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	ADH2	P00331	348 aa	Known RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	RPC40	P07703	335 aa	Known RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	VPS3	P23643	1011 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	BMH1	P29311	267 aa	Known RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	CSE2	P33308	149 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	TIR2	P33890	251 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	SPT10	P35208	640 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	DED81	P38707	554 aa	Known RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	LIN1	P38852	340 aa	Predicted RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	PTH1	P38876	190 aa	Known RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	COX14	P39103	70 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	PTI1	P39927	425 aa	Predicted RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	LOC1	P43586	204 aa	Predicted RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	RTC5	Q12108	567 aa	Known RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	YGK3	Q12222	375 aa	Predicted RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	NOT5	Q12514	560 aa	Predicted RBP	2.61	□□□□□ -1.99
RIM13	YMR154C	YOR338W	Q99326	363 aa		2.61	□□□□□ -1.99
RIM13	YMR154C	ISY1	P21374	235 aa	Predicted RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	POP5	P28005	173 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	DEG1	P31115	442 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	VPH2	P32341	215 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	SRB4	P32569	687 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	PRS1	P32895	427 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	UBC6	P33296	250 aa	Predicted RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	CSE1	P33307	960 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	SIP3	P38717	1229 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	SPT8	P38915	602 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	ALD5	P40047	520 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	LYS12	P40495	371 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	YIL089W	P40500	205 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	PHB1	P40961	287 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	YGR210C	P42942	411 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	KEG1	P43614	200 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	GCD14	P46959	383 aa	Predicted RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	BNS1	P50084	137 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	MIG2	P53035	382 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	AIM33	Q04516	312 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	HRI1	Q05905	244 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	LSO2	Q3E772	92 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	FSH3	Q99369	266 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	SPA2	P23201	1466 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	STH1	P32597	1359 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	CLN3	P13365	580 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	KSS1	P14681	368 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	CKA2	P19454	339 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	CHA1	P25379	360 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	PPQ1	P32945	549 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
RIM13	YMR154C	YKT6	P36015	200 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	ANR2	P36090	516 aa	Predicted RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	VPS51	P36116	164 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	GEP4	P38812	185 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	YHB1	P39676	399 aa	Known RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	PCL7	P40186	285 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	YIL029C	P40538	142 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	APS3	P47064	194 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	LSB1	P53281	241 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	GIM3	P53900	129 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	YMR102C	Q03177	834 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	MGR3	Q04472	501 aa		2.6	□□□□□ -1.99
RIM13	YMR154C	DIB1	Q06819	143 aa	Predicted RBP	2.6	□□□□□ -1.99
RIM13	YMR154C	MAS1	P10507	462 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	FUN26	P31381	517 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	SWD3	P38123	315 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	BNA6	P43619	295 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	SNX4	P47057	423 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	AIM24	P47127	394 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	ERV25	P54837	211 aa	Known RBP	2.59	□□□□□ -1.99
RIM13	YMR154C	RRN5	Q02983	363 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	NDE2	Q07500	545 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	MFG1	Q07684	458 aa		2.59	□□□□□ -1.99
RIM13	YMR154C	CDC37	P06101	506 aa	Known RBP	2.59	□□□□□ -2
RIM13	YMR154C	HIS3	P06633	220 aa		2.59	□□□□□ -2
RIM13	YMR154C	MSI1	P13712	422 aa		2.59	□□□□□ -2
RIM13	YMR154C	RPB5	P20434	215 aa		2.59	□□□□□ -2
RIM13	YMR154C	CKI1	P20485	582 aa		2.59	□□□□□ -2
RIM13	YMR154C	SEC14	P24280	304 aa	Known RBP	2.59	□□□□□ -2
RIM13	YMR154C	CTK3	P46963	296 aa	Predicted RBP	2.59	□□□□□ -2
RIM13	YMR154C	YGL242C	P53066	181 aa		2.59	□□□□□ -2
RIM13	YMR154C	LSG1	P53145	640 aa	Known RBP	2.59	□□□□□ -2
RIM13	YMR154C	RRP46	P53256	223 aa	Predicted RBP	2.59	□□□□□ -2
RIM13	YMR154C	YGR266W	P53326	701 aa		2.59	□□□□□ -2
RIM13	YMR154C	PRM1	P53835	661 aa		2.59	□□□□□ -2
RIM13	YMR154C	RRP17	Q04031	235 aa	Predicted RBP	2.59	□□□□□ -2
RIM13	YMR154C	RTN1	Q04947	295 aa	Known RBP	2.59	□□□□□ -2
RIM13	YMR154C	STE23	Q06010	1027 aa		2.59	□□□□□ -2
RIM13	YMR154C	RIF2	Q06208	395 aa		2.59	□□□□□ -2
RIM13	YMR154C	YDL114W	Q07530	308 aa		2.59	□□□□□ -2
RIM13	YMR154C	YDL144C	Q07589	356 aa		2.59	□□□□□ -2
RIM13	YMR154C	SMC5	Q08204	1093 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 386.2 ms