RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W RHO5P53879 331 aaKnown RBP4.29□□□□□ -1.72
BUD8YLR353W IZH1Q03419 316 aa4.29□□□□□ -1.72
BUD8YLR353W COQ11Q05892 277 aa4.29□□□□□ -1.72
BUD8YLR353W YET3Q07451 203 aa4.29□□□□□ -1.72
BUD8YLR353W SHS1Q07657 551 aa4.29□□□□□ -1.72
BUD8YLR353W NDJ1Q12366 352 aa4.29□□□□□ -1.72
BUD8YLR353W OCA6Q12454 224 aa4.29□□□□□ -1.72
BUD8YLR353W NOT5Q12514 560 aaPredicted RBP4.29□□□□□ -1.72
BUD8YLR353W ASP3-2P0CX77 362 aa4.28□□□□□ -1.72
BUD8YLR353W ASP3-3P0CX78 362 aa4.28□□□□□ -1.72
BUD8YLR353W ASP3-4P0CX79 362 aa4.28□□□□□ -1.72
BUD8YLR353W ASP3-1P0CZ17 362 aa4.28□□□□□ -1.72
BUD8YLR353W GPA2P10823 449 aa4.28□□□□□ -1.72
BUD8YLR353W GLK1P17709 500 aaKnown RBP4.28□□□□□ -1.72
BUD8YLR353W RHB1P25378 209 aa4.28□□□□□ -1.72
BUD8YLR353W LDB16P25587 256 aa4.28□□□□□ -1.72
BUD8YLR353W SCO2P38072 301 aa4.28□□□□□ -1.72
BUD8YLR353W FRT2P39734 528 aa4.28□□□□□ -1.72
BUD8YLR353W MKT1P40850 830 aaKnown RBP4.28□□□□□ -1.72
BUD8YLR353W COS6P53344 381 aa4.28□□□□□ -1.72
BUD8YLR353W OCA2P53949 197 aa4.28□□□□□ -1.72
BUD8YLR353W GLO2Q05584 274 aa4.28□□□□□ -1.72
BUD8YLR353W PHO92Q06390 306 aa4.28□□□□□ -1.72
BUD8YLR353W RRP36Q12481 300 aaPredicted RBP4.28□□□□□ -1.72
BUD8YLR353W YNL162W-AQ3E7A8 72 aa4.28□□□□□ -1.72
BUD8YLR353W FAD1P38913 306 aa4.28□□□□□ -1.72
BUD8YLR353W YIL054WP40524 105 aa4.28□□□□□ -1.72
BUD8YLR353W PSA1P41940 361 aaKnown RBP4.28□□□□□ -1.72
BUD8YLR353W USE1P53146 245 aa4.28□□□□□ -1.72
BUD8YLR353W GPI1P53306 609 aa4.28□□□□□ -1.72
BUD8YLR353W RPL15BP54780 204 aaPredicted RBP4.28□□□□□ -1.72
BUD8YLR353W TIM11P81449 96 aaPredicted RBP4.28□□□□□ -1.72
BUD8YLR353W RIM13Q03792 727 aa4.28□□□□□ -1.72
BUD8YLR353W THI20Q08224 551 aa4.28□□□□□ -1.72
BUD8YLR353W YPQ1Q12010 308 aa4.28□□□□□ -1.72
BUD8YLR353W YLL056CQ12177 298 aa4.28□□□□□ -1.72
BUD8YLR353W RUP1Q12242 671 aa4.28□□□□□ -1.72
BUD8YLR353W CAR1P00812 333 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W SCEIP03882 235 aa4.27□□□□□ -1.73
BUD8YLR353W ARO3P14843 370 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W MTF1P14908 341 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W AIM17P23180 465 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W RPL5P26321 297 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W CUE2P36075 443 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W ASC1P38011 319 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W PCL6P40038 420 aa4.27□□□□□ -1.73
BUD8YLR353W FAU1P40099 211 aa4.27□□□□□ -1.73
BUD8YLR353W DIM1P41819 318 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W YJR011CP47086 261 aaPredicted RBP4.27□□□□□ -1.73
BUD8YLR353W MRM2P53123 320 aa4.27□□□□□ -1.73
BUD8YLR353W BET4Q00618 327 aa4.27□□□□□ -1.73
BUD8YLR353W MSS11Q03825 758 aa4.27□□□□□ -1.73
BUD8YLR353W ARO80Q04052 950 aa4.27□□□□□ -1.73
BUD8YLR353W HSP31Q04432 237 aa4.27□□□□□ -1.73
BUD8YLR353W RPN8Q08723 338 aaKnown RBP4.27□□□□□ -1.73
BUD8YLR353W YPT1P01123 206 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W TEF1P02994 458 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W RPL24AP04449 155 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W LEU4P06208 619 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W MSF1P08425 469 aa4.26□□□□□ -1.73
BUD8YLR353W TAL1P15019 335 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W PHO84P25297 587 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W SRB2P34162 210 aa4.26□□□□□ -1.73
BUD8YLR353W SIF2P38262 535 aa4.26□□□□□ -1.73
BUD8YLR353W MLH1P38920 769 aa4.26□□□□□ -1.73
BUD8YLR353W STN1P38960 494 aa4.26□□□□□ -1.73
BUD8YLR353W SAS2P40963 338 aa4.26□□□□□ -1.73
BUD8YLR353W FMP33P46998 180 aa4.26□□□□□ -1.73
BUD8YLR353W YJR054WP47114 497 aa4.26□□□□□ -1.73
BUD8YLR353W COQ5P49017 307 aa4.26□□□□□ -1.73
BUD8YLR353W SAM50P53969 484 aa4.26□□□□□ -1.73
BUD8YLR353W OSH6Q02201 448 aa4.26□□□□□ -1.73
BUD8YLR353W BCP1Q06338 283 aa4.26□□□□□ -1.73
BUD8YLR353W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
BUD8YLR353W SNX3Q08826 162 aaKnown RBP4.26□□□□□ -1.73
BUD8YLR353W BSC1Q12140 328 aa4.26□□□□□ -1.73
BUD8YLR353W HER1Q12276 1246 aa4.26□□□□□ -1.73
BUD8YLR353W EMP46Q12396 444 aa4.26□□□□□ -1.73
BUD8YLR353W PAB1P04147 577 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
BUD8YLR353W RPL6BP05739 176 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W CIN8P27895 1000 aa4.25□□□□□ -1.73
BUD8YLR353W URA10P30402 227 aa4.25□□□□□ -1.73
BUD8YLR353W VPH2P32341 215 aa4.25□□□□□ -1.73
BUD8YLR353W SIP2P34164 415 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W ADH5P38113 351 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W RIM2P38127 377 aa4.25□□□□□ -1.73
BUD8YLR353W WSS1P38838 269 aa4.25□□□□□ -1.73
BUD8YLR353W PEP8P40335 379 aa4.25□□□□□ -1.73
BUD8YLR353W RPL6AQ02326 176 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W MZM1Q03429 123 aaPredicted RBP4.25□□□□□ -1.73
BUD8YLR353W TVP15Q03860 143 aa4.25□□□□□ -1.73
BUD8YLR353W HRT3Q12347 344 aa4.25□□□□□ -1.73
BUD8YLR353W IZH4Q99393 312 aa4.25□□□□□ -1.73
BUD8YLR353W RPL42AP0CX27 106 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W RPL42BP0CX28 106 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W MDM10P18409 493 aa4.25□□□□□ -1.73
BUD8YLR353W GLN3P18494 730 aa4.25□□□□□ -1.73
BUD8YLR353W PRR1P28708 518 aa4.25□□□□□ -1.73
BUD8YLR353W RIM1P32445 135 aaKnown RBP4.25□□□□□ -1.73
BUD8YLR353W VPS17P32913 551 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms