RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	TIF34	P40217	347 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	YIL108W	P40483	696 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	RPL10	P41805	221 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	STB1	P42845	420 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	IMD3	P50095	523 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	MTQ1	P53944	314 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	RHO3	Q00245	231 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	ABZ2	Q03266	374 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	GRX3	Q03835	250 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	YML096W	Q04489	525 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	ERB1	Q04660	807 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	RNH1	Q04740	348 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	GIC2	Q06648	383 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	NOP12	Q08208	459 aa	Known RBP	6.11	□□□□□ -1.43
MIA40	YKL195W	FDH1	Q08911	376 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	SRO7	Q12038	1033 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	YPR022C	Q12139	1133 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	SIA1	Q12212	622 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	YKL033W-A	Q86ZR7	236 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	LAG2	Q92325	660 aa		6.11	□□□□□ -1.43
MIA40	YKL195W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
MIA40	YKL195W	RPB5	P20434	215 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	VPS33	P20795	691 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	ARO7	P32178	256 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	CDC12	P32468	407 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	HIR2	P32480	875 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	SUI1	P32911	108 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	YPT7	P32939	208 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	YRO2	P38079	344 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	YHR035W	P38769	630 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	BAT1	P38891	393 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	LYS1	P38998	373 aa	RIP-Chip data	6.1	□□□□□ -1.43	not detected
MIA40	YKL195W	ZRG8	P40021	1076 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	VRG4	P40107	337 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	FAA4	P47912	694 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	RPS12	P48589	143 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	NUP57	P48837	541 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	RAI1	P53063	387 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	HOS2	P53096	452 aa	Predicted RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	CDH1	P53197	566 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	URC2	Q04411	772 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	YMR310C	Q04867	317 aa	Predicted RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	VID22	Q05934	901 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	DAP1	Q12091	152 aa		6.1	□□□□□ -1.43
MIA40	YKL195W	MEX67	Q99257	599 aa	Known RBP	6.1	□□□□□ -1.43
MIA40	YKL195W	GAL7	P08431	366 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	MET2	P08465	486 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	YOL163W	P0CF20	169 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	HEM13	P11353	328 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	SNF6	P18888	332 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	YCK1	P23291	538 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	PRO1	P32264	428 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	FMP46	P36141	133 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	GPX2	P38143	162 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	RPS20	P38701	121 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	PEX18	P38855	283 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	ELO1	P39540	310 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	IRC6	P43615	237 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	CHA4	P43634	648 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	MPC1	P53157	130 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	SYF2	P53277	215 aa	Predicted RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	MEP3	P53390	489 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	BUD17	P53727	317 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	DBP6	P53734	629 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	COS1	P53822	381 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	ELA1	P53861	379 aa	Predicted RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	EGD1	Q02642	157 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	YMR087W	Q04299	284 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	NAT4	Q04751	285 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	RSF1	Q05043	376 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	YLR446W	Q06204	433 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	YFT2	Q06676	274 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	NGL1	Q08213	363 aa	Known RBP	6.09	□□□□□ -1.43
MIA40	YKL195W	MMT2	Q08970	484 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	BSC1	Q12140	328 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	YOL107W	Q12239	342 aa		6.09	□□□□□ -1.43
MIA40	YKL195W	NFT1	P0CE68	1218 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	GCN3	P14741	305 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	PTP1	P25044	335 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	NDC1	P32500	655 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	ARC19	P33204	171 aa	Known RBP	6.08	□□□□□ -1.44
MIA40	YKL195W	SRX1	P36077	127 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	MBP1	P39678	833 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	FCY21	P40039	528 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	HOC1	P47124	396 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	AAD10	P47182	288 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	MNN10	P50108	393 aa	Known RBP	6.08	□□□□□ -1.44
MIA40	YKL195W	CWC23	P52868	283 aa	Predicted RBP	6.08	□□□□□ -1.44
MIA40	YKL195W	LSG1	P53145	640 aa	Known RBP	6.08	□□□□□ -1.44
MIA40	YKL195W	YGR045C	P53229	120 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	CPR8	P53728	308 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	PEX10	Q05568	337 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	ACF2	Q12168	779 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	RKM5	Q12367	367 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	YDR034W-B	Q6Q5X2	51 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	YOR019W	Q99248	730 aa		6.08	□□□□□ -1.44
MIA40	YKL195W	STT4	P37297	1900 aa		6.07	□□□□□ -1.44
MIA40	YKL195W	HOM2	P13663	365 aa	Known RBP	6.07	□□□□□ -1.44
MIA40	YKL195W	THR1	P17423	357 aa	Known RBP	6.07	□□□□□ -1.44
MIA40	YKL195W	APN1	P22936	367 aa		6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms