RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W VPS74Q06385 345 aa3.45□□□□□ -1.86
UBP12YJL197W CMS1Q07897 291 aaKnown RBP3.45□□□□□ -1.86
UBP12YJL197W NUP2P32499 720 aa3.45□□□□□ -1.86
UBP12YJL197W RSM22P36056 628 aa3.45□□□□□ -1.86
UBP12YJL197W BIG1P38813 335 aa3.45□□□□□ -1.86
UBP12YJL197W IRC7P43623 340 aa3.45□□□□□ -1.86
UBP12YJL197W LST7P53237 242 aa3.45□□□□□ -1.86
UBP12YJL197W FRE4P53746 719 aa3.45□□□□□ -1.86
UBP12YJL197W HER2Q03557 464 aa3.45□□□□□ -1.86
UBP12YJL197W HPR1P17629 752 aaKnown RBP3.44□□□□□ -1.86
UBP12YJL197W RBG1P39729 369 aa3.44□□□□□ -1.86
UBP12YJL197W VRG4P40107 337 aa3.44□□□□□ -1.86
UBP12YJL197W AIM24P47127 394 aa3.44□□□□□ -1.86
UBP12YJL197W SEH1P53011 349 aaKnown RBP3.44□□□□□ -1.86
UBP12YJL197W CUS2P53830 285 aaPredicted RBP3.44□□□□□ -1.86
UBP12YJL197W ODC1Q03028 310 aa3.44□□□□□ -1.86
UBP12YJL197W SPO77Q06134 477 aa3.44□□□□□ -1.86
UBP12YJL197W LAG2Q92325 660 aa3.44□□□□□ -1.86
UBP12YJL197W POP5P28005 173 aa3.44□□□□□ -1.86
UBP12YJL197W YEF1P32622 495 aa3.44□□□□□ -1.86
UBP12YJL197W ECM15P35195 104 aa3.44□□□□□ -1.86
UBP12YJL197W SIM1P40472 476 aa3.44□□□□□ -1.86
UBP12YJL197W KEG1P43614 200 aa3.44□□□□□ -1.86
UBP12YJL197W HIT1P46973 164 aa3.44□□□□□ -1.86
UBP12YJL197W YGL082WP53155 381 aa3.44□□□□□ -1.86
UBP12YJL197W LGE1Q02796 332 aaKnown RBP3.44□□□□□ -1.86
UBP12YJL197W MSS11Q03825 758 aa3.44□□□□□ -1.86
UBP12YJL197W ECI1Q05871 280 aa3.44□□□□□ -1.86
UBP12YJL197W NCA2Q12374 616 aa3.44□□□□□ -1.86
UBP12YJL197W MATALPHA1P0CY06 175 aa3.43□□□□□ -1.86
UBP12YJL197W HMLALPHA1P0CY07 175 aa3.43□□□□□ -1.86
UBP12YJL197W MRP1P10662 321 aaKnown RBP3.43□□□□□ -1.86
UBP12YJL197W TMT1P32643 299 aa3.43□□□□□ -1.86
UBP12YJL197W SWD2P36104 329 aaPredicted RBP3.43□□□□□ -1.86
UBP12YJL197W YPK3P38070 525 aa3.43□□□□□ -1.86
UBP12YJL197W EGD2P38879 174 aaKnown RBP3.43□□□□□ -1.86
UBP12YJL197W PAC2P39937 518 aa3.43□□□□□ -1.86
UBP12YJL197W APC9Q12107 265 aa3.43□□□□□ -1.86
UBP12YJL197W MSH5Q12175 901 aa3.43□□□□□ -1.86
UBP12YJL197W RRI1Q12468 440 aa3.43□□□□□ -1.86
UBP12YJL197W RPO26P20435 155 aa3.43□□□□□ -1.86
UBP12YJL197W OSM1P21375 501 aaKnown RBP3.43□□□□□ -1.86
UBP12YJL197W YCR100CP25606 316 aa3.43□□□□□ -1.86
UBP12YJL197W TIP1P27654 210 aaPredicted RBP3.43□□□□□ -1.86
UBP12YJL197W LOS1P33418 1100 aaPredicted RBP3.43□□□□□ -1.86
UBP12YJL197W PFS1P38872 237 aa3.43□□□□□ -1.86
UBP12YJL197W UTP18P40362 594 aaPredicted RBP3.43□□□□□ -1.86
UBP12YJL197W NUP116Q02630 1113 aa3.43□□□□□ -1.86
UBP12YJL197W IRC15Q02733 499 aa3.43□□□□□ -1.86
UBP12YJL197W YPL077CQ02831 240 aa3.43□□□□□ -1.86
UBP12YJL197W MRPL51Q06090 140 aaPredicted RBP3.43□□□□□ -1.86
UBP12YJL197W YDL009CQ12210 107 aa3.43□□□□□ -1.86
UBP12YJL197W AMD1P15274 810 aaKnown RBP3.43□□□□□ -1.86
UBP12YJL197W FRE2P36033 711 aa3.43□□□□□ -1.86
UBP12YJL197W LDB7P38210 180 aa3.43□□□□□ -1.86
UBP12YJL197W YHR035WP38769 630 aa3.43□□□□□ -1.86
UBP12YJL197W NPT1P39683 429 aaKnown RBP3.43□□□□□ -1.86
UBP12YJL197W COA1P40452 197 aa3.43□□□□□ -1.86
UBP12YJL197W RTT101P47050 842 aa3.43□□□□□ -1.86
UBP12YJL197W VPS25P47142 202 aa3.43□□□□□ -1.86
UBP12YJL197W PHB2P50085 310 aa3.43□□□□□ -1.86
UBP12YJL197W YNL181WP53878 407 aa3.43□□□□□ -1.86
UBP12YJL197W SED5Q01590 340 aa3.43□□□□□ -1.86
UBP12YJL197W POM152P39685 1337 aa3.43□□□□□ -1.86
UBP12YJL197W PGK1P00560 416 aaKnown RBP3.42□□□□□ -1.86
UBP12YJL197W COQ3P27680 312 aa3.42□□□□□ -1.86
UBP12YJL197W ITR2P30606 609 aa3.42□□□□□ -1.86
UBP12YJL197W VMA6P32366 345 aaKnown RBP3.42□□□□□ -1.86
UBP12YJL197W ELM1P32801 640 aa3.42□□□□□ -1.86
UBP12YJL197W RTS2P40962 232 aa3.42□□□□□ -1.86
UBP12YJL197W SPR6Q01684 191 aa3.42□□□□□ -1.86
UBP12YJL197W YMR206WQ03695 313 aa3.42□□□□□ -1.86
UBP12YJL197W TIM18Q08749 192 aa3.42□□□□□ -1.86
UBP12YJL197W PFA4Q12006 378 aa3.42□□□□□ -1.86
UBP12YJL197W SRO7Q12038 1033 aa3.42□□□□□ -1.86
UBP12YJL197W SEY1Q99287 776 aa3.42□□□□□ -1.86
UBP12YJL197W TEF1P02994 458 aaKnown RBP3.42□□□□□ -1.86
UBP12YJL197W MUD1P32605 298 aaKnown RBP3.42□□□□□ -1.86
UBP12YJL197W TDA11P38854 504 aa3.42□□□□□ -1.86
UBP12YJL197W ATG7P38862 630 aa3.42□□□□□ -1.86
UBP12YJL197W RPC17P47076 161 aa3.42□□□□□ -1.86
UBP12YJL197W HSH155P49955 971 aaKnown RBP3.42□□□□□ -1.86
UBP12YJL197W STB4P50104 949 aa3.42□□□□□ -1.86
UBP12YJL197W LIF1P53150 421 aa3.42□□□□□ -1.86
UBP12YJL197W RGT2Q12300 763 aa3.42□□□□□ -1.86
UBP12YJL197W SPO11P23179 398 aa3.42□□□□□ -1.86
UBP12YJL197W DDI1P40087 428 aa3.42□□□□□ -1.86
UBP12YJL197W SFH5P47008 294 aa3.42□□□□□ -1.86
UBP12YJL197W MUM3Q08750 479 aa3.42□□□□□ -1.86
UBP12YJL197W CSM4Q08955 156 aa3.42□□□□□ -1.86
UBP12YJL197W ERP3Q12403 225 aa3.42□□□□□ -1.86
UBP12YJL197W IKI3Q06706 1349 aaKnown RBP3.42□□□□□ -1.86
UBP12YJL197W YKL097CP34245 136 aa3.41□□□□□ -1.86
UBP12YJL197W YFL040WP43562 540 aa3.41□□□□□ -1.86
UBP12YJL197W CAF40P53829 373 aa3.41□□□□□ -1.86
UBP12YJL197W CSM3Q04659 317 aa3.41□□□□□ -1.86
UBP12YJL197W YPQ1Q12010 308 aa3.41□□□□□ -1.86
UBP12YJL197W YLR108CQ12259 485 aa3.41□□□□□ -1.86
UBP12YJL197W RHO1P06780 209 aaKnown RBP3.41□□□□□ -1.86
UBP12YJL197W MKK1P32490 508 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms