RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W SMD2Q06217 110 aaKnown RBP6.02□□□□□ -1.45
SNU71YGR013W TSR1Q07381 788 aaKnown RBP6.02□□□□□ -1.45
SNU71YGR013W SKI7Q08491 747 aaPredicted RBP6.02□□□□□ -1.45
SNU71YGR013W ATG31Q12421 196 aa6.02□□□□□ -1.45
SNU71YGR013W AHC1Q12433 566 aa6.02□□□□□ -1.45
SNU71YGR013W UBA3Q99344 299 aa6.02□□□□□ -1.45
SNU71YGR013W JIP3O13555 125 aa6.01□□□□□ -1.45
SNU71YGR013W SPO12P17123 173 aa6.01□□□□□ -1.45
SNU71YGR013W ARC19P33204 171 aaKnown RBP6.01□□□□□ -1.45
SNU71YGR013W NAT4Q04751 285 aa6.01□□□□□ -1.45
SNU71YGR013W SSQ1Q05931 657 aaPredicted RBP6.01□□□□□ -1.45
SNU71YGR013W TPO3Q06451 622 aa6.01□□□□□ -1.45
SNU71YGR013W SHS1Q07657 551 aa6.01□□□□□ -1.45
SNU71YGR013W YOR338WQ99326 363 aa6.01□□□□□ -1.45
SNU71YGR013W HEM2P05373 342 aa6□□□□□ -1.45
SNU71YGR013W PRP16P15938 1071 aaPredicted RBP6□□□□□ -1.45
SNU71YGR013W OSM1P21375 501 aaKnown RBP6□□□□□ -1.45
SNU71YGR013W YCR016WP25617 290 aaKnown RBP6□□□□□ -1.45
SNU71YGR013W ITR1P30605 584 aa6□□□□□ -1.45
SNU71YGR013W PRO3P32263 286 aaKnown RBP6□□□□□ -1.45
SNU71YGR013W MRPS5P33759 307 aa6□□□□□ -1.45
SNU71YGR013W LYS1P38998 373 aaRIP-Chip data6□□□□□ -1.45 RIP-Chip
SNU71YGR013W PRM9P39551 298 aa6□□□□□ -1.45
SNU71YGR013W YAR1P46683 200 aa6□□□□□ -1.45
SNU71YGR013W NRD1P53617 575 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
SNU71YGR013W KTR6P54070 446 aa6□□□□□ -1.45
SNU71YGR013W MRPS17Q03246 237 aaPredicted RBP6□□□□□ -1.45
SNU71YGR013W CAC2Q04199 468 aa6□□□□□ -1.45
SNU71YGR013W GLO2Q05584 274 aa6□□□□□ -1.45
SNU71YGR013W COX2P00410 251 aa6□□□□□ -1.45
SNU71YGR013W VAM7P32912 316 aa6□□□□□ -1.45
SNU71YGR013W MYO3P36006 1272 aa6□□□□□ -1.45
SNU71YGR013W COS9P36034 407 aa6□□□□□ -1.45
SNU71YGR013W YCR041WP37265 110 aa6□□□□□ -1.45
SNU71YGR013W VRG4P40107 337 aa6□□□□□ -1.45
SNU71YGR013W YGR117CP53270 476 aa6□□□□□ -1.45
SNU71YGR013W YPL062WQ02781 134 aa6□□□□□ -1.45
SNU71YGR013W CTL1Q03220 320 aaKnown RBP6□□□□□ -1.45
SNU71YGR013W TOM1Q03280 3268 aa5.99□□□□□ -1.45
SNU71YGR013W GAL4P04386 881 aa5.99□□□□□ -1.45
SNU71YGR013W RAD3P06839 778 aa5.99□□□□□ -1.45
SNU71YGR013W UTR1P21373 530 aa5.99□□□□□ -1.45
SNU71YGR013W RVS161P25343 265 aaKnown RBP5.99□□□□□ -1.45
SNU71YGR013W YBR056WP38081 501 aa5.99□□□□□ -1.45
SNU71YGR013W RIM2P38127 377 aa5.99□□□□□ -1.45
SNU71YGR013W APD1P38281 316 aa5.99□□□□□ -1.45
SNU71YGR013W NAS6P50086 228 aa5.99□□□□□ -1.45
SNU71YGR013W FRE4P53746 719 aa5.99□□□□□ -1.45
SNU71YGR013W GTO3Q04806 366 aa5.99□□□□□ -1.45
SNU71YGR013W TPK3P05986 398 aa5.98□□□□□ -1.45
SNU71YGR013W CDC43P18898 376 aa5.98□□□□□ -1.45
SNU71YGR013W SKG6P32900 734 aaPredicted RBP5.98□□□□□ -1.45
SNU71YGR013W PHD1P36093 366 aa5.98□□□□□ -1.45
SNU71YGR013W OSH3P38713 996 aaKnown RBP5.98□□□□□ -1.45
SNU71YGR013W RRN9P53437 365 aa5.98□□□□□ -1.45
SNU71YGR013W RSN1Q03516 953 aa5.98□□□□□ -1.45
SNU71YGR013W BNA5Q05979 453 aa5.98□□□□□ -1.45
SNU71YGR013W SRL2Q12020 392 aa5.98□□□□□ -1.45
SNU71YGR013W SSK22P25390 1331 aaPredicted RBP5.98□□□□□ -1.45
SNU71YGR013W CYM1P32898 989 aa5.98□□□□□ -1.45
SNU71YGR013W SIM1P40472 476 aa5.98□□□□□ -1.45
SNU71YGR013W IRC7P43623 340 aa5.98□□□□□ -1.45
SNU71YGR013W SUN4P53616 420 aa5.98□□□□□ -1.45
SNU71YGR013W YOR029WQ12243 111 aa5.98□□□□□ -1.45
SNU71YGR013W RRI1Q12468 440 aa5.98□□□□□ -1.45
SNU71YGR013W RAD1P06777 1100 aa5.97□□□□□ -1.45
SNU71YGR013W DAL81P21657 970 aa5.97□□□□□ -1.45
SNU71YGR013W LSB5P25369 354 aa5.97□□□□□ -1.45
SNU71YGR013W RME1P32338 300 aaKnown RBP5.97□□□□□ -1.45
SNU71YGR013W COX13P32799 129 aa5.97□□□□□ -1.45
SNU71YGR013W YEL020CP39994 560 aa5.97□□□□□ -1.45
SNU71YGR013W SHO1P40073 367 aa5.97□□□□□ -1.45
SNU71YGR013W KAP114P53067 1004 aa5.97□□□□□ -1.45
SNU71YGR013W TIM44Q01852 431 aa5.97□□□□□ -1.45
SNU71YGR013W PNG1Q02890 363 aa5.97□□□□□ -1.45
SNU71YGR013W IZH1Q03419 316 aa5.97□□□□□ -1.45
SNU71YGR013W MSS11Q03825 758 aa5.97□□□□□ -1.45
SNU71YGR013W UBX2Q04228 584 aa5.97□□□□□ -1.45
SNU71YGR013W RAD7P06779 565 aa5.96□□□□□ -1.45
SNU71YGR013W VMA5P31412 392 aaKnown RBP5.96□□□□□ -1.45
SNU71YGR013W MMS21P38632 267 aa5.96□□□□□ -1.45
SNU71YGR013W ATG7P38862 630 aa5.96□□□□□ -1.45
SNU71YGR013W BIO4P53630 237 aa5.96□□□□□ -1.45
SNU71YGR013W HXT11P54862 567 aa5.96□□□□□ -1.45
SNU71YGR013W SNZ1Q03148 297 aa5.96□□□□□ -1.45
SNU71YGR013W RVB1Q03940 463 aaKnown RBP5.96□□□□□ -1.45
SNU71YGR013W THI20Q08224 551 aa5.96□□□□□ -1.45
SNU71YGR013W SIA1Q12212 622 aa5.96□□□□□ -1.45
SNU71YGR013W FAR1P21268 830 aa5.96□□□□□ -1.46
SNU71YGR013W FRE2P36033 711 aa5.96□□□□□ -1.46
SNU71YGR013W YKL071WP36086 256 aa5.96□□□□□ -1.46
SNU71YGR013W HIS2P38635 335 aa5.96□□□□□ -1.46
SNU71YGR013W CSM2P40465 213 aa5.96□□□□□ -1.46
SNU71YGR013W GND2P53319 492 aa5.96□□□□□ -1.46
SNU71YGR013W SGT1Q08446 395 aa5.96□□□□□ -1.46
SNU71YGR013W ADH2P00331 348 aaKnown RBP5.95□□□□□ -1.46
SNU71YGR013W TDH2P00358 332 aaKnown RBP5.95□□□□□ -1.46
SNU71YGR013W ATP1P07251 545 aaKnown RBP5.95□□□□□ -1.46
SNU71YGR013W FUS3P16892 353 aaKnown RBP5.95□□□□□ -1.46
SNU71YGR013W MNS1P32906 549 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms