RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	SSY5	P47002	699 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	BIT61	P47041	543 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	CWC23	P52868	283 aa	Predicted RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	FHN1	P53279	174 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	CIK1	Q01649	594 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	RRP17	Q04031	235 aa	Predicted RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	ERB1	Q04660	807 aa	Known RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	ARO10	Q06408	635 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	MDM36	Q06820	579 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	BSC1	Q12140	328 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	SIA1	Q12212	622 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	PNS1	Q12412	539 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	COX3	P00420	269 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	NFT1	P0CE68	1218 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	RRP7	P25368	297 aa	Predicted RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	ADE1	P27616	306 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	SFC1	P33303	322 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	YKL069W	P36088	180 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	SRL3	P36167	246 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	MRPL37	P36532	105 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	ASC1	P38011	319 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	PFS1	P38872	237 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	MNN10	P50108	393 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	YGR168C	P53293	376 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	RHO4	Q00246	291 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	YML096W	Q04489	525 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	NEJ1	Q06148	342 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	VPS36	Q06696	566 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	RSC58	Q07979	502 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	NGL1	Q08213	363 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	SRO7	Q12038	1033 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	RCN2	Q12044	265 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	DIN7	Q12086	430 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	SFM1	Q12314	213 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	PNO1	Q99216	274 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	MSB2	P32334	1306 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	STE7	P06784	515 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	DBP3	P20447	523 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	KGD1	P20967	1014 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	GIT1	P25346	518 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	CMK1	P27466	446 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	OAC1	P32332	324 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	NDC1	P32500	655 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	GPX2	P38143	162 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	SIT1	P39980	628 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	RPL10	P41805	221 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	YJL055W	P47044	245 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	IMD3	P50095	523 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	HOS2	P53096	452 aa	Predicted RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	VPS73	P53142	486 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	MEP3	P53390	489 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	CPR8	P53728	308 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	SNZ1	Q03148	297 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	RQC1	Q05468	723 aa	Known RBP	4.39	□□□□□ -1.71
SUP35	YDR172W	CDA2	Q06703	312 aa		4.39	□□□□□ -1.71
SUP35	YDR172W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SUP35	YDR172W	CSF1	Q12150	2958 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	PPH21	P23594	369 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	DBP2	P24783	546 aa	Known RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	BUD5	P25300	642 aa	Predicted RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	DHR2	P36009	735 aa	Predicted RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	FMP46	P36141	133 aa	Known RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	PCL6	P40038	420 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	MET28	P40573	187 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	BPL1	P48445	690 aa	Predicted RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	UBC9	P50623	157 aa	Predicted RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	CTL1	Q03220	320 aa	Known RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	MTQ2	Q03920	221 aa	Predicted RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	RSF1	Q05043	376 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	ATG38	Q05789	226 aa	Known RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	ORM2	Q06144	216 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	BOP2	Q06150	570 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	YFT2	Q06676	274 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	ACF2	Q12168	779 aa		4.38	□□□□□ -1.71
SUP35	YDR172W	TOR2	P32600	2474 aa	Known RBP	4.38	□□□□□ -1.71
SUP35	YDR172W	TFS1	P14306	219 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	VPS33	P20795	691 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	IDP1	P21954	428 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	HCM1	P25364	564 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	ARE1	P25628	610 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	PRP19	P32523	503 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	SRO77	P38163	1010 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	YHR112C	P38716	378 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	YHK8	P38776	514 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	AIM10	P39965	576 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	MIT1	P40002	666 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	ZRG8	P40021	1076 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	SNM1	P40993	198 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	YJL049W	P47048	450 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	HOC1	P47124	396 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	NQM1	P53228	333 aa	Predicted RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	DBP6	P53734	629 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	FIN1	Q03898	291 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	RNH1	Q04740	348 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	YMR310C	Q04867	317 aa	Predicted RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	MMT2	Q08970	484 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	CDC31	P06704	161 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	CAR2	P07991	424 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	RPL11A	P0C0W9	174 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	BUD23	P25627	275 aa	Predicted RBP	4.37	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms