RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA2	YKR077W	RPL6A	Q02326	176 aa	Known RBP	4.08	□□□□□ -1.76
MSA2	YKR077W	YFH1	Q07540	174 aa		4.08	□□□□□ -1.76
MSA2	YKR077W	SPO23	P33757	523 aa		4.07	□□□□□ -1.76
MSA2	YKR077W	GDT1	P38301	280 aa	Predicted RBP	4.07	□□□□□ -1.76
MSA2	YKR077W	SKI8	Q02793	397 aa	Predicted RBP	4.07	□□□□□ -1.76
MSA2	YKR077W	YDL199C	Q12407	687 aa		4.07	□□□□□ -1.76
MSA2	YKR077W	IES6	P32617	166 aa		4.06	□□□□□ -1.76
MSA2	YKR077W	SEC27	P41811	889 aa	Known RBP	4.06	□□□□□ -1.76
MSA2	YKR077W	AIP1	P46680	615 aa	Known RBP	4.06	□□□□□ -1.76
MSA2	YKR077W	MRP21	P38175	177 aa		4.05	□□□□□ -1.76
MSA2	YKR077W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.05	□□□□□ -1.76
MSA2	YKR077W	MRPL8	P22353	238 aa		4.04	□□□□□ -1.76
MSA2	YKR077W	YBL028C	P38202	106 aa		4.04	□□□□□ -1.76
MSA2	YKR077W	YSW1	P38280	609 aa		4.04	□□□□□ -1.76
MSA2	YKR077W	EOS1	P53938	366 aa		4.04	□□□□□ -1.76
MSA2	YKR077W	REX2	P54964	269 aa	Known RBP	4.04	□□□□□ -1.76
MSA2	YKR077W	SKS1	Q12505	502 aa		4.04	□□□□□ -1.76
MSA2	YKR077W	COX4	P04037	155 aa		4.03	□□□□□ -1.76
MSA2	YKR077W	PRB1	P09232	635 aa		4.03	□□□□□ -1.76
MSA2	YKR077W	MSP1	P28737	362 aa		4.03	□□□□□ -1.76
MSA2	YKR077W	PFS1	P38872	237 aa		4.03	□□□□□ -1.76
MSA2	YKR077W	TIM17	P39515	158 aa		4.03	□□□□□ -1.76
MSA2	YKR077W	TRF5	P48561	642 aa	Known RBP	4.03	□□□□□ -1.76
MSA2	YKR077W	YMR010W	Q03687	405 aa		4.03	□□□□□ -1.76
MSA2	YKR077W	ZRC1	P20107	442 aa		4.02	□□□□□ -1.77
MSA2	YKR077W	PSO2	P30620	661 aa		4.02	□□□□□ -1.77
MSA2	YKR077W	LSM12	P38828	187 aa	Known RBP	4.02	□□□□□ -1.77
MSA2	YKR077W	YPL107W	Q02873	248 aa		4.02	□□□□□ -1.77
MSA2	YKR077W	YHC1	Q05900	231 aa	Known RBP	4.02	□□□□□ -1.77
MSA2	YKR077W	DNL4	Q08387	944 aa	Predicted RBP	4.02	□□□□□ -1.77
MSA2	YKR077W	PEX27	Q08580	376 aa		4.02	□□□□□ -1.77
MSA2	YKR077W	HMS1	Q12398	434 aa		4.02	□□□□□ -1.77
MSA2	YKR077W	FRE6	Q12473	712 aa		4.02	□□□□□ -1.77
MSA2	YKR077W	RPS18A	P0CX55	146 aa	Known RBP	4.01	□□□□□ -1.77
MSA2	YKR077W	RPS18B	P0CX56	146 aa	Predicted RBP	4.01	□□□□□ -1.77
MSA2	YKR077W	SCH9	P11792	824 aa	Known RBP	4.01	□□□□□ -1.77
MSA2	YKR077W	FAA1	P30624	700 aa	Known RBP	4.01	□□□□□ -1.77
MSA2	YKR077W	DEP1	P31385	405 aa		4.01	□□□□□ -1.77
MSA2	YKR077W	DAD2	P36162	133 aa		4.01	□□□□□ -1.77
MSA2	YKR077W	RET3	P53600	189 aa		4.01	□□□□□ -1.77
MSA2	YKR077W	MRPS16	Q02608	121 aa		4.01	□□□□□ -1.77
MSA2	YKR077W	GAT3	Q07928	141 aa		4.01	□□□□□ -1.77
MSA2	YKR077W	PSK1	P31374	1356 aa		4.01	□□□□□ -1.77
MSA2	YKR077W	DAP2	P18962	818 aa		4	□□□□□ -1.77
MSA2	YKR077W	GIT1	P25346	518 aa		4	□□□□□ -1.77
MSA2	YKR077W	CHA1	P25379	360 aa	Known RBP	4	□□□□□ -1.77
MSA2	YKR077W	GPI18	P38211	433 aa		4	□□□□□ -1.77
MSA2	YKR077W	SEC9	P40357	651 aa		4	□□□□□ -1.77
MSA2	YKR077W	LYS12	P40495	371 aa	Known RBP	4	□□□□□ -1.77
MSA2	YKR077W	YPR078C	Q06813	372 aa		4	□□□□□ -1.77
MSA2	YKR077W	SHS1	Q07657	551 aa		4	□□□□□ -1.77
MSA2	YKR077W	STE7	P06784	515 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	MSK1	P32048	576 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	DPH2	P32461	534 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	MID2	P36027	376 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	ALD5	P40047	520 aa	Known RBP	3.99	□□□□□ -1.77
MSA2	YKR077W	IGD1	P43598	195 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	KEG1	P43614	200 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	CIN2	P46670	268 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	YPS5	P53057	165 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	MKC7	P53379	596 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	MSC3	Q05812	728 aa		3.99	□□□□□ -1.77
MSA2	YKR077W	UBA1	P22515	1024 aa	Known RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	DBR1	P24309	405 aa	Known RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	RPL16A	P26784	199 aa	Known RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	EFB1	P32471	206 aa	Known RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	SSE1	P32589	693 aa	Known RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	ADH5	P38113	351 aa	Known RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	SNL1	P40548	159 aa		3.98	□□□□□ -1.77
MSA2	YKR077W	CTK3	P46963	296 aa	Predicted RBP	3.98	□□□□□ -1.77
MSA2	YKR077W	MPS2	P53159	387 aa		3.98	□□□□□ -1.77
MSA2	YKR077W	YNR068C	P53754	272 aa		3.98	□□□□□ -1.77
MSA2	YKR077W	MCT1	Q12283	360 aa		3.98	□□□□□ -1.77
MSA2	YKR077W	YOR338W	Q99326	363 aa		3.98	□□□□□ -1.77
MSA2	YKR077W	MAS2	P11914	482 aa		3.97	□□□□□ -1.77
MSA2	YKR077W	CMK2	P22517	447 aa		3.97	□□□□□ -1.77
MSA2	YKR077W	PHO84	P25297	587 aa	Known RBP	3.97	□□□□□ -1.77
MSA2	YKR077W	APE4	P38821	490 aa		3.97	□□□□□ -1.77
MSA2	YKR077W	PGU1	P47180	361 aa		3.97	□□□□□ -1.77
MSA2	YKR077W	CWC22	P53333	577 aa	Known RBP	3.97	□□□□□ -1.77
MSA2	YKR077W	ENT5	Q03769	411 aa	Known RBP	3.97	□□□□□ -1.77
MSA2	YKR077W	YLH47	Q06493	454 aa		3.97	□□□□□ -1.77
MSA2	YKR077W	YDL109C	Q12103	647 aa		3.97	□□□□□ -1.77
MSA2	YKR077W	FOL3	Q12676	427 aa	Predicted RBP	3.97	□□□□□ -1.77
MSA2	YKR077W	HEM4	P06174	275 aa		3.96	□□□□□ -1.78
MSA2	YKR077W	VAM7	P32912	316 aa		3.96	□□□□□ -1.78
MSA2	YKR077W	BLI1	P35727	113 aa		3.96	□□□□□ -1.78
MSA2	YKR077W	LCP5	P40079	357 aa	Predicted RBP	3.96	□□□□□ -1.78
MSA2	YKR077W	PRP38	Q00723	242 aa	Predicted RBP	3.96	□□□□□ -1.78
MSA2	YKR077W	VHS1	Q03785	461 aa		3.96	□□□□□ -1.78
MSA2	YKR077W	SFM1	Q12314	213 aa		3.96	□□□□□ -1.78
MSA2	YKR077W	SOL2	P37262	315 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	YHR182W	P38870	785 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	SEO1	P39709	593 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	HEM14	P40012	539 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	VAC7	P53950	1165 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	KTR6	P54070	446 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	UTP6	Q02354	440 aa	Known RBP	3.95	□□□□□ -1.78
MSA2	YKR077W	AIM33	Q04516	312 aa		3.95	□□□□□ -1.78
MSA2	YKR077W	SFG1	Q12507	346 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms