RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W YDR541CQ03049 344 aa2.63□□□□□ -1.99
CAP1YKL007W URC2Q04411 772 aa2.63□□□□□ -1.99
CAP1YKL007W AAD15Q08361 143 aa2.63□□□□□ -1.99
CAP1YKL007W THO2P53552 1597 aaKnown RBP2.62□□□□□ -1.99
CAP1YKL007W ADH1P00330 348 aaKnown RBP2.62□□□□□ -1.99
CAP1YKL007W ZUO1P32527 433 aaKnown RBP2.62□□□□□ -1.99
CAP1YKL007W SOL2P37262 315 aa2.62□□□□□ -1.99
CAP1YKL007W BMT2P38278 337 aa2.62□□□□□ -1.99
CAP1YKL007W SLX1P38324 304 aa2.62□□□□□ -1.99
CAP1YKL007W PEX22P39718 180 aa2.62□□□□□ -1.99
CAP1YKL007W YFL012WP43580 148 aa2.62□□□□□ -1.99
CAP1YKL007W TRF5P48561 642 aaKnown RBP2.62□□□□□ -1.99
CAP1YKL007W ROG1P53118 685 aa2.62□□□□□ -1.99
CAP1YKL007W YGR018CP53211 109 aa2.62□□□□□ -1.99
CAP1YKL007W VHT1P53241 593 aa2.62□□□□□ -1.99
CAP1YKL007W RTT102P53330 157 aa2.62□□□□□ -1.99
CAP1YKL007W CWC22P53333 577 aaKnown RBP2.62□□□□□ -1.99
CAP1YKL007W RRN9P53437 365 aa2.62□□□□□ -1.99
CAP1YKL007W REX2P54964 269 aaKnown RBP2.62□□□□□ -1.99
CAP1YKL007W ECM7Q06200 448 aa2.62□□□□□ -1.99
CAP1YKL007W GPM3Q12326 303 aa2.62□□□□□ -1.99
CAP1YKL007W ESP1Q03018 1630 aa2.61□□□□□ -1.99
CAP1YKL007W OPI3P05375 206 aa2.61□□□□□ -1.99
CAP1YKL007W RPS18AP0CX55 146 aaKnown RBP2.61□□□□□ -1.99
CAP1YKL007W RPS18BP0CX56 146 aaPredicted RBP2.61□□□□□ -1.99
CAP1YKL007W YSC83P32792 385 aa2.61□□□□□ -1.99
CAP1YKL007W ECT1P33412 323 aa2.61□□□□□ -1.99
CAP1YKL007W SPO23P33757 523 aa2.61□□□□□ -1.99
CAP1YKL007W PXA2P34230 853 aa2.61□□□□□ -1.99
CAP1YKL007W KAP104P38217 918 aaKnown RBP2.61□□□□□ -1.99
CAP1YKL007W ERO1Q03103 563 aa2.61□□□□□ -1.99
CAP1YKL007W ATG2P53855 1592 aa2.61□□□□□ -1.99
CAP1YKL007W MRPL27P36526 146 aaPredicted RBP2.6□□□□□ -1.99
CAP1YKL007W PGU1P47180 361 aa2.6□□□□□ -1.99
CAP1YKL007W RPL21AQ02753 160 aaKnown RBP2.6□□□□□ -1.99
CAP1YKL007W MSC3Q05812 728 aa2.6□□□□□ -1.99
CAP1YKL007W ASA1Q06822 443 aa2.6□□□□□ -1.99
CAP1YKL007W LDS2Q08218 356 aa2.6□□□□□ -1.99
CAP1YKL007W SPE3Q12074 293 aaKnown RBP2.6□□□□□ -1.99
CAP1YKL007W LDB17Q12342 491 aa2.6□□□□□ -1.99
CAP1YKL007W RPL21BQ12672 160 aaKnown RBP2.6□□□□□ -1.99
CAP1YKL007W DNA2P38859 1522 aa2.59□□□□□ -1.99
CAP1YKL007W ASP3-2P0CX77 362 aa2.59□□□□□ -1.99
CAP1YKL007W ASP3-3P0CX78 362 aa2.59□□□□□ -1.99
CAP1YKL007W ASP3-4P0CX79 362 aa2.59□□□□□ -1.99
CAP1YKL007W ASP3-1P0CZ17 362 aa2.59□□□□□ -1.99
CAP1YKL007W CMK2P22517 447 aa2.59□□□□□ -1.99
CAP1YKL007W TOA2P32774 122 aa2.59□□□□□ -1.99
CAP1YKL007W SEC27P41811 889 aaKnown RBP2.59□□□□□ -1.99
CAP1YKL007W ASN2P49090 572 aaKnown RBP2.59□□□□□ -1.99
CAP1YKL007W TOS2P50078 622 aa2.59□□□□□ -1.99
CAP1YKL007W PMT5P52867 743 aa2.59□□□□□ -1.99
CAP1YKL007W SXM1Q04175 944 aaKnown RBP2.59□□□□□ -1.99
CAP1YKL007W SRN2Q99176 213 aa2.59□□□□□ -1.99
CAP1YKL007W PEP1P32319 1579 aa2.58□□□□□ -2
CAP1YKL007W RNA1P11745 407 aaKnown RBP2.58□□□□□ -2
CAP1YKL007W MRPL8P22353 238 aa2.58□□□□□ -2
CAP1YKL007W RRP7P25368 297 aaPredicted RBP2.58□□□□□ -2
CAP1YKL007W LDS1P31379 325 aa2.58□□□□□ -2
CAP1YKL007W VMA8P32610 256 aaKnown RBP2.58□□□□□ -2
CAP1YKL007W PFF1P38244 976 aa2.58□□□□□ -2
CAP1YKL007W PRP38Q00723 242 aaPredicted RBP2.58□□□□□ -2
CAP1YKL007W ENT5Q03769 411 aaKnown RBP2.58□□□□□ -2
CAP1YKL007W GYL1Q04322 720 aa2.58□□□□□ -2
CAP1YKL007W RPN5Q12250 445 aaKnown RBP2.58□□□□□ -2
CAP1YKL007W SFM1Q12314 213 aa2.58□□□□□ -2
CAP1YKL007W HIF1Q12373 385 aa2.58□□□□□ -2
CAP1YKL007W RAX2Q12465 1220 aa2.58□□□□□ -2
CAP1YKL007W TPI1P00942 248 aaKnown RBP2.57□□□□□ -2
CAP1YKL007W RPL1AP0CX43 217 aaKnown RBP2.57□□□□□ -2
CAP1YKL007W RPL1BP0CX44 217 aaKnown RBP2.57□□□□□ -2
CAP1YKL007W MPE1P35728 441 aaKnown RBP2.57□□□□□ -2
CAP1YKL007W DTR1P38125 572 aa2.57□□□□□ -2
CAP1YKL007W YHC1Q05900 231 aaKnown RBP2.57□□□□□ -2
CAP1YKL007W IPK1Q06667 281 aa2.57□□□□□ -2
CAP1YKL007W HEM4P06174 275 aa2.56□□□□□ -2
CAP1YKL007W MAS2P11914 482 aa2.56□□□□□ -2
CAP1YKL007W RPL16AP26784 199 aaKnown RBP2.56□□□□□ -2
CAP1YKL007W WSC4P38739 605 aa2.56□□□□□ -2
CAP1YKL007W CHL4P38907 458 aa2.56□□□□□ -2
CAP1YKL007W YER184CP39961 794 aa2.56□□□□□ -2
CAP1YKL007W KEG1P43614 200 aa2.56□□□□□ -2
CAP1YKL007W CIN2P46670 268 aa2.56□□□□□ -2
CAP1YKL007W MEH1Q02205 184 aa2.56□□□□□ -2
CAP1YKL007W YLR177WQ06251 628 aa2.56□□□□□ -2
CAP1YKL007W PIN3Q06449 215 aa2.56□□□□□ -2
CAP1YKL007W NOP6Q07623 225 aaKnown RBP2.56□□□□□ -2
CAP1YKL007W TAF2P23255 1407 aa2.56□□□□□ -2
CAP1YKL007W CHD1P32657 1468 aa2.56□□□□□ -2
CAP1YKL007W MYO2P19524 1574 aaKnown RBP2.56□□□□□ -2
CAP1YKL007W KOG1P38873 1557 aa2.56□□□□□ -2
CAP1YKL007W TY2B-LR1P0C2J3 1770 aa2.55□□□□□ -2
CAP1YKL007W TY2B-FP0CX63 1770 aa2.55□□□□□ -2
CAP1YKL007W TY2B-GR2P0CX64 1770 aa2.55□□□□□ -2
CAP1YKL007W POL1P13382 1468 aa2.55□□□□□ -2
CAP1YKL007W TY2B-CP25384 1770 aa2.55□□□□□ -2
CAP1YKL007W FMT1P32785 401 aa2.55□□□□□ -2
CAP1YKL007W COS9P36034 407 aa2.55□□□□□ -2
CAP1YKL007W YBL028CP38202 106 aa2.55□□□□□ -2
CAP1YKL007W MNL1P38888 796 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms