RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RRN9P53437 365 aa2.09□□□□□ -2.07
PEP8YJL053W HAL1Q01766 294 aa2.09□□□□□ -2.07
PEP8YJL053W PEX27Q08580 376 aa2.09□□□□□ -2.07
PEP8YJL053W SKS1Q12505 502 aa2.09□□□□□ -2.07
PEP8YJL053W NAG1Q8TGN9 163 aa2.09□□□□□ -2.07
PEP8YJL053W FUN26P31381 517 aa2.08□□□□□ -2.08
PEP8YJL053W EFB1P32471 206 aaKnown RBP2.08□□□□□ -2.08
PEP8YJL053W APE4P38821 490 aa2.08□□□□□ -2.08
PEP8YJL053W LSM12P38828 187 aaKnown RBP2.08□□□□□ -2.08
PEP8YJL053W ATG18P43601 500 aa2.08□□□□□ -2.08
PEP8YJL053W TIS11P47977 285 aa2.08□□□□□ -2.08
PEP8YJL053W TOS2P50078 622 aa2.08□□□□□ -2.08
PEP8YJL053W COS1P53822 381 aa2.08□□□□□ -2.08
PEP8YJL053W SKI8Q02793 397 aaPredicted RBP2.08□□□□□ -2.08
PEP8YJL053W YET2Q04210 160 aa2.08□□□□□ -2.08
PEP8YJL053W NOP6Q07623 225 aaKnown RBP2.08□□□□□ -2.08
PEP8YJL053W FCY22Q12119 530 aa2.08□□□□□ -2.08
PEP8YJL053W PCL1P24867 279 aa2.07□□□□□ -2.08
PEP8YJL053W CDC50P25656 391 aa2.07□□□□□ -2.08
PEP8YJL053W PSO2P30620 661 aa2.07□□□□□ -2.08
PEP8YJL053W DEP1P31385 405 aa2.07□□□□□ -2.08
PEP8YJL053W MSK1P32048 576 aa2.07□□□□□ -2.08
PEP8YJL053W SSE1P32589 693 aaKnown RBP2.07□□□□□ -2.08
PEP8YJL053W IES6P32617 166 aa2.07□□□□□ -2.08
PEP8YJL053W TOA2P32774 122 aa2.07□□□□□ -2.08
PEP8YJL053W SPO23P33757 523 aa2.07□□□□□ -2.08
PEP8YJL053W YSW1P38280 609 aa2.07□□□□□ -2.08
PEP8YJL053W PTI1P39927 425 aaPredicted RBP2.07□□□□□ -2.08
PEP8YJL053W YER186CP40101 306 aa2.07□□□□□ -2.08
PEP8YJL053W LYS12P40495 371 aaKnown RBP2.07□□□□□ -2.08
PEP8YJL053W SNL1P40548 159 aa2.07□□□□□ -2.08
PEP8YJL053W BNS1P50084 137 aa2.07□□□□□ -2.08
PEP8YJL053W REX2P54964 269 aaKnown RBP2.07□□□□□ -2.08
PEP8YJL053W YPL107WQ02873 248 aa2.07□□□□□ -2.08
PEP8YJL053W SHS1Q07657 551 aa2.07□□□□□ -2.08
PEP8YJL053W FRE6Q12473 712 aa2.07□□□□□ -2.08
PEP8YJL053W NBL1Q3E7Y6 73 aa2.07□□□□□ -2.08
PEP8YJL053W STE7P06784 515 aa2.06□□□□□ -2.08
PEP8YJL053W HSP26P15992 214 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
PEP8YJL053W UBA1P22515 1024 aaKnown RBP2.06□□□□□ -2.08
PEP8YJL053W RPL16AP26784 199 aaKnown RBP2.06□□□□□ -2.08
PEP8YJL053W FAA1P30624 700 aaKnown RBP2.06□□□□□ -2.08
PEP8YJL053W VPH1P32563 840 aaKnown RBP2.06□□□□□ -2.08
PEP8YJL053W ANR2P36090 516 aaPredicted RBP2.06□□□□□ -2.08
PEP8YJL053W UTH1P36135 365 aa2.06□□□□□ -2.08
PEP8YJL053W BMT2P38278 337 aa2.06□□□□□ -2.08
PEP8YJL053W OM14P38325 134 aa2.06□□□□□ -2.08
PEP8YJL053W YHR177WP38867 453 aa2.06□□□□□ -2.08
PEP8YJL053W YHR182WP38870 785 aa2.06□□□□□ -2.08
PEP8YJL053W RPA34P47006 233 aaPredicted RBP2.06□□□□□ -2.08
PEP8YJL053W MFG1Q07684 458 aa2.06□□□□□ -2.08
PEP8YJL053W HIF1Q12373 385 aa2.06□□□□□ -2.08
PEP8YJL053W YDL199CQ12407 687 aa2.06□□□□□ -2.08
PEP8YJL053W RPS18AP0CX55 146 aaKnown RBP2.05□□□□□ -2.08
PEP8YJL053W RPS18BP0CX56 146 aaPredicted RBP2.05□□□□□ -2.08
PEP8YJL053W SCH9P11792 824 aaKnown RBP2.05□□□□□ -2.08
PEP8YJL053W GPI18P38211 433 aa2.05□□□□□ -2.08
PEP8YJL053W BAT1P38891 393 aaKnown RBP2.05□□□□□ -2.08
PEP8YJL053W MKC7P53379 596 aa2.05□□□□□ -2.08
PEP8YJL053W RET3P53600 189 aa2.05□□□□□ -2.08
PEP8YJL053W YNR068CP53754 272 aa2.05□□□□□ -2.08
PEP8YJL053W KTR6P54070 446 aa2.05□□□□□ -2.08
PEP8YJL053W RNY1Q02933 434 aaKnown RBP2.05□□□□□ -2.08
PEP8YJL053W YMR310CQ04867 317 aaPredicted RBP2.05□□□□□ -2.08
PEP8YJL053W GLE1Q12315 538 aa2.05□□□□□ -2.08
PEP8YJL053W YDL012CQ12489 107 aa2.05□□□□□ -2.08
PEP8YJL053W PSK1P31374 1356 aa2.05□□□□□ -2.08
PEP8YJL053W COX4P04037 155 aa2.04□□□□□ -2.08
PEP8YJL053W MAS1P10507 462 aa2.04□□□□□ -2.08
PEP8YJL053W MAS2P11914 482 aa2.04□□□□□ -2.08
PEP8YJL053W THR4P16120 514 aaKnown RBP2.04□□□□□ -2.08
PEP8YJL053W ZRC1P20107 442 aa2.04□□□□□ -2.08
PEP8YJL053W DBR1P24309 405 aaKnown RBP2.04□□□□□ -2.08
PEP8YJL053W GIT1P25346 518 aa2.04□□□□□ -2.08
PEP8YJL053W RDS1P25611 832 aa2.04□□□□□ -2.08
PEP8YJL053W LDS1P31379 325 aa2.04□□□□□ -2.08
PEP8YJL053W HMX1P32339 317 aa2.04□□□□□ -2.08
PEP8YJL053W DPH2P32461 534 aa2.04□□□□□ -2.08
PEP8YJL053W VAM7P32912 316 aa2.04□□□□□ -2.08
PEP8YJL053W LAS1P36146 502 aaPredicted RBP2.04□□□□□ -2.08
PEP8YJL053W SOL2P37262 315 aa2.04□□□□□ -2.08
PEP8YJL053W TIM17P39515 158 aa2.04□□□□□ -2.08
PEP8YJL053W MSC3Q05812 728 aa2.04□□□□□ -2.08
PEP8YJL053W MCH1Q07376 486 aa2.04□□□□□ -2.08
PEP8YJL053W YDL109CQ12103 647 aa2.04□□□□□ -2.08
PEP8YJL053W FOL3Q12676 427 aaPredicted RBP2.04□□□□□ -2.08
PEP8YJL053W DNA2P38859 1522 aa2.03□□□□□ -2.08
PEP8YJL053W HEM4P06174 275 aa2.03□□□□□ -2.08
PEP8YJL053W PRB1P09232 635 aa2.03□□□□□ -2.08
PEP8YJL053W MID2P36027 376 aa2.03□□□□□ -2.08
PEP8YJL053W COS9P36034 407 aa2.03□□□□□ -2.08
PEP8YJL053W YKR015CP36111 568 aa2.03□□□□□ -2.08
PEP8YJL053W ADH5P38113 351 aaKnown RBP2.03□□□□□ -2.08
PEP8YJL053W MRP21P38175 177 aa2.03□□□□□ -2.08
PEP8YJL053W PFS1P38872 237 aa2.03□□□□□ -2.08
PEP8YJL053W LCP5P40079 357 aaPredicted RBP2.03□□□□□ -2.08
PEP8YJL053W IGD1P43598 195 aa2.03□□□□□ -2.08
PEP8YJL053W YJR030CP47101 745 aa2.03□□□□□ -2.08
PEP8YJL053W ABM1P47146 123 aa2.03□□□□□ -2.08
PEP8YJL053W PRM1P53835 661 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 81.4 ms