RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	PCL1	P24867	279 aa		3.04	□□□□□ -1.92
LSM4	YER112W	YER186C	P40101	306 aa		3.04	□□□□□ -1.92
LSM4	YER112W	SEC27	P41811	889 aa	Known RBP	3.04	□□□□□ -1.92
LSM4	YER112W	CWC22	P53333	577 aa	Known RBP	3.04	□□□□□ -1.92
LSM4	YER112W	SKI8	Q02793	397 aa	Predicted RBP	3.04	□□□□□ -1.92
LSM4	YER112W	YET2	Q04210	160 aa		3.04	□□□□□ -1.92
LSM4	YER112W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
LSM4	YER112W	CDC50	P25656	391 aa		3.03	□□□□□ -1.92
LSM4	YER112W	SPO23	P33757	523 aa		3.03	□□□□□ -1.92
LSM4	YER112W	ANR2	P36090	516 aa	Predicted RBP	3.03	□□□□□ -1.92
LSM4	YER112W	OM14	P38325	134 aa		3.03	□□□□□ -1.92
LSM4	YER112W	LSM12	P38828	187 aa	Known RBP	3.03	□□□□□ -1.92
LSM4	YER112W	SEC9	P40357	651 aa		3.03	□□□□□ -1.92
LSM4	YER112W	TRF5	P48561	642 aa	Known RBP	3.03	□□□□□ -1.92
LSM4	YER112W	MPS2	P53159	387 aa		3.03	□□□□□ -1.92
LSM4	YER112W	MFG1	Q07684	458 aa		3.03	□□□□□ -1.92
LSM4	YER112W	PEX27	Q08580	376 aa		3.03	□□□□□ -1.92
LSM4	YER112W	NAT1	P12945	854 aa	Known RBP	3.02	□□□□□ -1.93
LSM4	YER112W	PHO84	P25297	587 aa	Known RBP	3.02	□□□□□ -1.93
LSM4	YER112W	PSO2	P30620	661 aa		3.02	□□□□□ -1.93
LSM4	YER112W	EFB1	P32471	206 aa	Known RBP	3.02	□□□□□ -1.93
LSM4	YER112W	UTH1	P36135	365 aa		3.02	□□□□□ -1.93
LSM4	YER112W	YSW1	P38280	609 aa		3.02	□□□□□ -1.93
LSM4	YER112W	APE4	P38821	490 aa		3.02	□□□□□ -1.93
LSM4	YER112W	YHR177W	P38867	453 aa		3.02	□□□□□ -1.93
LSM4	YER112W	BAT1	P38891	393 aa	Known RBP	3.02	□□□□□ -1.93
LSM4	YER112W	YPL107W	Q02873	248 aa		3.02	□□□□□ -1.93
LSM4	YER112W	TSA2	Q04120	196 aa		3.02	□□□□□ -1.93
LSM4	YER112W	YDL199C	Q12407	687 aa		3.02	□□□□□ -1.93
LSM4	YER112W	FRE6	Q12473	712 aa		3.02	□□□□□ -1.93
LSM4	YER112W	SOD1	P00445	154 aa	Known RBP	3.01	□□□□□ -1.93
LSM4	YER112W	FAA1	P30624	700 aa	Known RBP	3.01	□□□□□ -1.93
LSM4	YER112W	DEP1	P31385	405 aa		3.01	□□□□□ -1.93
LSM4	YER112W	SSE1	P32589	693 aa	Known RBP	3.01	□□□□□ -1.93
LSM4	YER112W	SWI3	P32591	825 aa		3.01	□□□□□ -1.93
LSM4	YER112W	IES6	P32617	166 aa		3.01	□□□□□ -1.93
LSM4	YER112W	LYS12	P40495	371 aa	Known RBP	3.01	□□□□□ -1.93
LSM4	YER112W	SNL1	P40548	159 aa		3.01	□□□□□ -1.93
LSM4	YER112W	REX2	P54964	269 aa	Known RBP	3.01	□□□□□ -1.93
LSM4	YER112W	SPT7	P35177	1332 aa		3	□□□□□ -1.93
LSM4	YER112W	STE7	P06784	515 aa		3	□□□□□ -1.93
LSM4	YER112W	RPS18A	P0CX55	146 aa	Known RBP	3	□□□□□ -1.93
LSM4	YER112W	RPS18B	P0CX56	146 aa	Predicted RBP	3	□□□□□ -1.93
LSM4	YER112W	UBA1	P22515	1024 aa	Known RBP	3	□□□□□ -1.93
LSM4	YER112W	RPL16A	P26784	199 aa	Known RBP	3	□□□□□ -1.93
LSM4	YER112W	MSK1	P32048	576 aa		3	□□□□□ -1.93
LSM4	YER112W	RPA34	P47006	233 aa	Predicted RBP	3	□□□□□ -1.93
LSM4	YER112W	RET3	P53600	189 aa		3	□□□□□ -1.93
LSM4	YER112W	SHS1	Q07657	551 aa		3	□□□□□ -1.93
LSM4	YER112W	HIF1	Q12373	385 aa		3	□□□□□ -1.93
LSM4	YER112W	NBL1	Q3E7Y6	73 aa		3	□□□□□ -1.93
LSM4	YER112W	PSK1	P31374	1356 aa		3	□□□□□ -1.93
LSM4	YER112W	COX4	P04037	155 aa		2.99	□□□□□ -1.93
LSM4	YER112W	SCH9	P11792	824 aa	Known RBP	2.99	□□□□□ -1.93
LSM4	YER112W	MAS2	P11914	482 aa		2.99	□□□□□ -1.93
LSM4	YER112W	ZRC1	P20107	442 aa		2.99	□□□□□ -1.93
LSM4	YER112W	GPI18	P38211	433 aa		2.99	□□□□□ -1.93
LSM4	YER112W	BMT2	P38278	337 aa		2.99	□□□□□ -1.93
LSM4	YER112W	YHR182W	P38870	785 aa		2.99	□□□□□ -1.93
LSM4	YER112W	ABM1	P47146	123 aa		2.99	□□□□□ -1.93
LSM4	YER112W	PRB1	P09232	635 aa		2.98	□□□□□ -1.93
LSM4	YER112W	GIT1	P25346	518 aa		2.98	□□□□□ -1.93
LSM4	YER112W	VAM7	P32912	316 aa		2.98	□□□□□ -1.93
LSM4	YER112W	MID2	P36027	376 aa		2.98	□□□□□ -1.93
LSM4	YER112W	MRP21	P38175	177 aa		2.98	□□□□□ -1.93
LSM4	YER112W	TIM17	P39515	158 aa		2.98	□□□□□ -1.93
LSM4	YER112W	LCP5	P40079	357 aa	Predicted RBP	2.98	□□□□□ -1.93
LSM4	YER112W	MKC7	P53379	596 aa		2.98	□□□□□ -1.93
LSM4	YER112W	YNR068C	P53754	272 aa		2.98	□□□□□ -1.93
LSM4	YER112W	MSC3	Q05812	728 aa		2.98	□□□□□ -1.93
LSM4	YER112W	YPR078C	Q06813	372 aa		2.98	□□□□□ -1.93
LSM4	YER112W	THR4	P16120	514 aa	Known RBP	2.97	□□□□□ -1.93
LSM4	YER112W	DAP2	P18962	818 aa		2.97	□□□□□ -1.93
LSM4	YER112W	DBR1	P24309	405 aa	Known RBP	2.97	□□□□□ -1.93
LSM4	YER112W	RDS1	P25611	832 aa		2.97	□□□□□ -1.93
LSM4	YER112W	LDS1	P31379	325 aa		2.97	□□□□□ -1.93
LSM4	YER112W	VPH1	P32563	840 aa	Known RBP	2.97	□□□□□ -1.93
LSM4	YER112W	YKR015C	P36111	568 aa		2.97	□□□□□ -1.93
LSM4	YER112W	LAS1	P36146	502 aa	Predicted RBP	2.97	□□□□□ -1.93
LSM4	YER112W	SOL2	P37262	315 aa		2.97	□□□□□ -1.93
LSM4	YER112W	ADH5	P38113	351 aa	Known RBP	2.97	□□□□□ -1.93
LSM4	YER112W	PFS1	P38872	237 aa		2.97	□□□□□ -1.93
LSM4	YER112W	IGD1	P43598	195 aa		2.97	□□□□□ -1.93
LSM4	YER112W	KTR6	P54070	446 aa		2.97	□□□□□ -1.93
LSM4	YER112W	DNL4	Q08387	944 aa	Predicted RBP	2.97	□□□□□ -1.93
LSM4	YER112W	YDL109C	Q12103	647 aa		2.97	□□□□□ -1.93
LSM4	YER112W	SFM1	Q12314	213 aa		2.97	□□□□□ -1.93
LSM4	YER112W	FOL3	Q12676	427 aa	Predicted RBP	2.97	□□□□□ -1.93
LSM4	YER112W	HEM4	P06174	275 aa		2.96	□□□□□ -1.94
LSM4	YER112W	MAS1	P10507	462 aa		2.96	□□□□□ -1.94
LSM4	YER112W	HMX1	P32339	317 aa		2.96	□□□□□ -1.94
LSM4	YER112W	DPH2	P32461	534 aa		2.96	□□□□□ -1.94
LSM4	YER112W	MRPS16	Q02608	121 aa		2.96	□□□□□ -1.94
LSM4	YER112W	VHS1	Q03785	461 aa		2.96	□□□□□ -1.94
LSM4	YER112W	YMR310C	Q04867	317 aa	Predicted RBP	2.96	□□□□□ -1.94
LSM4	YER112W	YHC1	Q05900	231 aa	Known RBP	2.96	□□□□□ -1.94
LSM4	YER112W	DBP9	Q06218	594 aa	Known RBP	2.96	□□□□□ -1.94
LSM4	YER112W	GAT3	Q07928	141 aa		2.96	□□□□□ -1.94
LSM4	YER112W	GLE1	Q12315	538 aa		2.96	□□□□□ -1.94
LSM4	YER112W	YOR338W	Q99326	363 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 112.7 ms