RNA–Protein interactions for RNA: YPL238C

YPL238C, Transcript of Dubious open reading frame, yeastyeast

Gene YPL238C, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL238CYPL238C NUP116Q02630 1113 aa1.83□□□□□ -2.12
YPL238CYPL238C RPN9Q04062 393 aaKnown RBP1.83□□□□□ -2.12
YPL238CYPL238C RRP45Q05636 305 aaKnown RBP1.83□□□□□ -2.12
YPL238CYPL238C SIL1Q08199 421 aa1.83□□□□□ -2.12
YPL238CYPL238C UAF30Q08747 228 aa1.83□□□□□ -2.12
YPL238CYPL238C RUD3Q12234 484 aaKnown RBP1.83□□□□□ -2.12
YPL238CYPL238C RIP1P08067 215 aa1.82□□□□□ -2.12
YPL238CYPL238C GCD2P12754 651 aaPredicted RBP1.82□□□□□ -2.12
YPL238CYPL238C DAP2P18962 818 aa1.82□□□□□ -2.12
YPL238CYPL238C DBP3P20447 523 aaKnown RBP1.82□□□□□ -2.12
YPL238CYPL238C ARA1P38115 344 aa1.82□□□□□ -2.12
YPL238CYPL238C PFF1P38244 976 aa1.82□□□□□ -2.12
YPL238CYPL238C MMS4P38257 691 aa1.82□□□□□ -2.12
YPL238CYPL238C SLX1P38324 304 aa1.82□□□□□ -2.12
YPL238CYPL238C UTP18P40362 594 aaPredicted RBP1.82□□□□□ -2.12
YPL238CYPL238C DFG10P40526 253 aa1.82□□□□□ -2.12
YPL238CYPL238C VMA13P41807 478 aaKnown RBP1.82□□□□□ -2.12
YPL238CYPL238C RPA34P47006 233 aaPredicted RBP1.82□□□□□ -2.12
YPL238CYPL238C YJR011CP47086 261 aaPredicted RBP1.82□□□□□ -2.12
YPL238CYPL238C COS5P47187 383 aa1.82□□□□□ -2.12
YPL238CYPL238C KEL2P50090 882 aa1.82□□□□□ -2.12
YPL238CYPL238C RPT4P53549 437 aaKnown RBP1.82□□□□□ -2.12
YPL238CYPL238C PRM1P53835 661 aa1.82□□□□□ -2.12
YPL238CYPL238C ACL4Q03771 387 aa1.82□□□□□ -2.12
YPL238CYPL238C YMR130WQ04223 302 aa1.82□□□□□ -2.12
YPL238CYPL238C RRB1Q04225 511 aaKnown RBP1.82□□□□□ -2.12
YPL238CYPL238C YLR413WQ06689 675 aa1.82□□□□□ -2.12
YPL238CYPL238C YFH1Q07540 174 aa1.82□□□□□ -2.12
YPL238CYPL238C COS7Q07788 383 aa1.82□□□□□ -2.12
YPL238CYPL238C URA4P20051 364 aa1.81□□□□□ -2.12
YPL238CYPL238C UBA1P22515 1024 aaKnown RBP1.81□□□□□ -2.12
YPL238CYPL238C FAA1P30624 700 aaKnown RBP1.81□□□□□ -2.12
YPL238CYPL238C KAR9P32526 644 aa1.81□□□□□ -2.12
YPL238CYPL238C HSM3P38348 480 aa1.81□□□□□ -2.12
YPL238CYPL238C PCF11P39081 626 aaPredicted RBP1.81□□□□□ -2.12
YPL238CYPL238C MIG3P39943 394 aa1.81□□□□□ -2.12
YPL238CYPL238C YIL029CP40538 142 aa1.81□□□□□ -2.12
YPL238CYPL238C YFR018CP43599 363 aa1.81□□□□□ -2.12
YPL238CYPL238C LIA1P47120 325 aaKnown RBP1.81□□□□□ -2.12
YPL238CYPL238C RRP46P53256 223 aaPredicted RBP1.81□□□□□ -2.12
YPL238CYPL238C YNL143CP53908 130 aa1.81□□□□□ -2.12
YPL238CYPL238C LIP2Q06005 328 aa1.81□□□□□ -2.12
YPL238CYPL238C KAP95Q06142 861 aaKnown RBP1.81□□□□□ -2.12
YPL238CYPL238C NDE2Q07500 545 aa1.81□□□□□ -2.12
YPL238CYPL238C SKI7Q08491 747 aaPredicted RBP1.81□□□□□ -2.12
YPL238CYPL238C IZH2Q12442 317 aa1.81□□□□□ -2.12
YPL238CYPL238C STE2D6VTK4 431 aa1.8□□□□□ -2.12
YPL238CYPL238C CBP2P03874 630 aaPredicted RBP1.8□□□□□ -2.12
YPL238CYPL238C STE3P06783 470 aa1.8□□□□□ -2.12
YPL238CYPL238C RNA1P11745 407 aaKnown RBP1.8□□□□□ -2.12
YPL238CYPL238C ARO3P14843 370 aaKnown RBP1.8□□□□□ -2.12
YPL238CYPL238C RHB1P25378 209 aa1.8□□□□□ -2.12
YPL238CYPL238C RDS1P25611 832 aa1.8□□□□□ -2.12
YPL238CYPL238C RIM1P32445 135 aaKnown RBP1.8□□□□□ -2.12
YPL238CYPL238C IES6P32617 166 aa1.8□□□□□ -2.12
YPL238CYPL238C COY1P34237 679 aa1.8□□□□□ -2.12
YPL238CYPL238C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
YPL238CYPL238C YBL028CP38202 106 aa1.8□□□□□ -2.12
YPL238CYPL238C ZTA1P38230 334 aaKnown RBP1.8□□□□□ -2.12
YPL238CYPL238C CTM1P38818 585 aa1.8□□□□□ -2.12
YPL238CYPL238C FAD1P38913 306 aa1.8□□□□□ -2.12
YPL238CYPL238C MNN9P39107 395 aaKnown RBP1.8□□□□□ -2.12
YPL238CYPL238C SSO2P39926 295 aa1.8□□□□□ -2.12
YPL238CYPL238C SER3P40054 469 aa1.8□□□□□ -2.12
YPL238CYPL238C YHC3P47040 408 aa1.8□□□□□ -2.12
YPL238CYPL238C EMC2P47133 292 aaKnown RBP1.8□□□□□ -2.12
YPL238CYPL238C EFM3P47163 339 aa1.8□□□□□ -2.12
YPL238CYPL238C LSB1P53281 241 aa1.8□□□□□ -2.12
YPL238CYPL238C YGR266WP53326 701 aa1.8□□□□□ -2.12
YPL238CYPL238C ABZ2Q03266 374 aa1.8□□□□□ -2.12
YPL238CYPL238C VPS20Q04272 221 aa1.8□□□□□ -2.12
YPL238CYPL238C MSC3Q05812 728 aa1.8□□□□□ -2.12
YPL238CYPL238C ARV1Q06541 321 aa1.8□□□□□ -2.12
YPL238CYPL238C YPR172WQ06608 200 aa1.8□□□□□ -2.12
YPL238CYPL238C PLP2Q12017 286 aa1.8□□□□□ -2.12
YPL238CYPL238C MRPL23Q12487 163 aaPredicted RBP1.8□□□□□ -2.12
YPL238CYPL238C MTR10Q99189 972 aa1.8□□□□□ -2.12
YPL238CYPL238C QCR6P00127 147 aa1.79□□□□□ -2.12
YPL238CYPL238C ILV5P06168 395 aaKnown RBP1.79□□□□□ -2.12
YPL238CYPL238C SEC63P14906 663 aa1.79□□□□□ -2.12
YPL238CYPL238C PET18P25362 215 aa1.79□□□□□ -2.12
YPL238CYPL238C BEM1P29366 551 aa1.79□□□□□ -2.12
YPL238CYPL238C SIN4P32259 974 aa1.79□□□□□ -2.12
YPL238CYPL238C MRPL37P36532 105 aa1.79□□□□□ -2.12
YPL238CYPL238C ATP3P38077 311 aaKnown RBP1.79□□□□□ -2.12
YPL238CYPL238C PEX18P38855 283 aa1.79□□□□□ -2.12
YPL238CYPL238C MLH1P38920 769 aa1.79□□□□□ -2.12
YPL238CYPL238C END3P39013 349 aa1.79□□□□□ -2.12
YPL238CYPL238C JLP2P40206 208 aa1.79□□□□□ -2.12
YPL238CYPL238C VHS2P40463 436 aa1.79□□□□□ -2.12
YPL238CYPL238C SIM1P40472 476 aa1.79□□□□□ -2.12
YPL238CYPL238C YFR057WP43625 151 aa1.79□□□□□ -2.12
YPL238CYPL238C YIP5P53108 310 aa1.79□□□□□ -2.12
YPL238CYPL238C PIB2P53191 635 aa1.79□□□□□ -2.12
YPL238CYPL238C MKC7P53379 596 aa1.79□□□□□ -2.12
YPL238CYPL238C MPP6P53725 186 aaPredicted RBP1.79□□□□□ -2.12
YPL238CYPL238C GIP3Q03016 1276 aa1.79□□□□□ -2.12
YPL238CYPL238C VHS1Q03785 461 aa1.79□□□□□ -2.12
YPL238CYPL238C ATC1Q04005 294 aa1.79□□□□□ -2.12
YPL238CYPL238C ECM18Q04623 453 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms