RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	RIC1	P40395	1056 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	MET18	P40469	1032 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	MEP2	P41948	499 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	ECL1	P48235	211 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	MSY1	P48527	492 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	ZIP2	P53061	704 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	OGG1	P53397	376 aa	Predicted RBP	4.64	□□□□□ -1.67
SSO1	YPL232W	LSC1	P53598	329 aa	Known RBP	4.64	□□□□□ -1.67
SSO1	YPL232W	YMR310C	Q04867	317 aa	Predicted RBP	4.64	□□□□□ -1.67
SSO1	YPL232W	BUR2	Q05949	395 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	PUN1	Q06991	263 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	NTO1	Q12311	748 aa		4.64	□□□□□ -1.67
SSO1	YPL232W	COS2	P0CX12	379 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	COS3	P0CX13	379 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	PDX1	P16451	410 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	KGD1	P20967	1014 aa	Known RBP	4.63	□□□□□ -1.67
SSO1	YPL232W	HIR2	P32480	875 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	SSO1	P32867	290 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	RPC37	P36121	282 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	MRPL39	P36533	70 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	YHL012W	P38709	493 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	AIM2	P39721	246 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	ECM10	P39987	644 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	COS4	P43542	379 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	RPS12	P48589	143 aa	Known RBP	4.63	□□□□□ -1.67
SSO1	YPL232W	GTR2	P53290	341 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	BIO4	P53630	237 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	ASI1	P54074	624 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	UBX4	P54730	416 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	SHR3	Q02774	210 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	YPL071C	Q02864	156 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	FMP40	Q08968	688 aa	Predicted RBP	4.63	□□□□□ -1.67
SSO1	YPL232W	SWM1	Q12379	170 aa		4.63	□□□□□ -1.67
SSO1	YPL232W	YPR096C	O13587	100 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	CBP2	P03874	630 aa	Predicted RBP	4.62	□□□□□ -1.67
SSO1	YPL232W	PET123	P17558	318 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	MDH2	P22133	377 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	CTS1	P29029	562 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	DBF20	P32328	564 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	SSE1	P32589	693 aa	Known RBP	4.62	□□□□□ -1.67
SSO1	YPL232W	PHO89	P38361	574 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	TSL1	P38427	1098 aa	Known RBP	4.62	□□□□□ -1.67
SSO1	YPL232W	ANS1	P38832	159 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	SCS2	P40075	244 aa	Known RBP	4.62	□□□□□ -1.67
SSO1	YPL232W	FMP32	P43557	207 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	MNT4	P53745	580 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	IST1	P53843	298 aa	Predicted RBP	4.62	□□□□□ -1.67
SSO1	YPL232W	RHO5	P53879	331 aa	Known RBP	4.62	□□□□□ -1.67
SSO1	YPL232W	SWP1	Q02795	286 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	ECM11	Q04110	302 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	MRPL1	Q04599	285 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	GMC2	Q06201	188 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	MSA1	Q08471	629 aa		4.62	□□□□□ -1.67
SSO1	YPL232W	UTR1	P21373	530 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	MRPL25	P23369	157 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	COS111	P38308	924 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	NSG1	P38837	291 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	MTC6	P38849	526 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	ARF3	P40994	183 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
SSO1	YPL232W	YJR098C	P47139	656 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	UBC9	P50623	157 aa	Predicted RBP	4.61	□□□□□ -1.67
SSO1	YPL232W	DUG3	P53871	357 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	IRC15	Q02733	499 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	YMR265C	Q03508	461 aa	Known RBP	4.61	□□□□□ -1.67
SSO1	YPL232W	PNP1	Q05788	311 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	VPS74	Q06385	345 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	APC9	Q12107	265 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	MCM16	Q12262	181 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	ATG34	Q12292	412 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	DBP10	Q12389	995 aa	Known RBP	4.61	□□□□□ -1.67
SSO1	YPL232W	RMP1	Q12530	201 aa		4.61	□□□□□ -1.67
SSO1	YPL232W	YER145C-A	A0A023PYF4	145 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	STE6	P12866	1290 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	TFS1	P14306	219 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	NUP1	P20676	1076 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	BUB2	P26448	306 aa	Predicted RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	RPB9	P27999	122 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	CAT2	P32796	670 aa	Known RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	YPT7	P32939	208 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	LOS1	P33418	1100 aa	Predicted RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	YOR062C	P36025	268 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	STP2	P38704	541 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	SKN7	P38889	622 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	YJL193W	P39542	402 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	YEN1	P40028	759 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	SHO1	P40073	367 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	JEM1	P40358	645 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	YIL165C	P40446	119 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	IDP2	P41939	412 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	PRP31	P49704	494 aa	Predicted RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	LSG1	P53145	640 aa	Known RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	DAM1	P53267	343 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	SLM2	P53955	656 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	IDP3	P53982	420 aa	Known RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	ACS1	Q01574	713 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	HAS1	Q03532	505 aa	Known RBP	4.6	□□□□□ -1.67
SSO1	YPL232W	HNT3	Q08702	217 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	GRE1	Q08969	168 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	BSC1	Q12140	328 aa		4.6	□□□□□ -1.67
SSO1	YPL232W	PSY3	Q12318	242 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms