RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W SLX1P38324 304 aa2.41□□□□□ -2.02
UBP16YPL072W GPI16P38875 610 aa2.41□□□□□ -2.02
UBP16YPL072W YAL037WP39728 267 aa2.41□□□□□ -2.02
UBP16YPL072W PCL7P40186 285 aa2.41□□□□□ -2.02
UBP16YPL072W FRE4P53746 719 aa2.41□□□□□ -2.02
UBP16YPL072W YNR068CP53754 272 aa2.41□□□□□ -2.02
UBP16YPL072W CWC25P53854 179 aaKnown RBP2.41□□□□□ -2.02
UBP16YPL072W GPI15P53961 229 aa2.41□□□□□ -2.02
UBP16YPL072W HAL1Q01766 294 aa2.41□□□□□ -2.02
UBP16YPL072W NOP6Q07623 225 aaKnown RBP2.41□□□□□ -2.02
UBP16YPL072W PEX27Q08580 376 aa2.41□□□□□ -2.02
UBP16YPL072W ATG34Q12292 412 aa2.41□□□□□ -2.02
UBP16YPL072W GLE1Q12315 538 aa2.41□□□□□ -2.02
UBP16YPL072W STE3P06783 470 aa2.4□□□□□ -2.03
UBP16YPL072W GRR1P24814 1151 aa2.4□□□□□ -2.03
UBP16YPL072W RDS1P25611 832 aa2.4□□□□□ -2.03
UBP16YPL072W DAL80P26343 269 aa2.4□□□□□ -2.03
UBP16YPL072W ITR1P30605 584 aa2.4□□□□□ -2.03
UBP16YPL072W SSE1P32589 693 aaKnown RBP2.4□□□□□ -2.03
UBP16YPL072W DOA1P36037 715 aa2.4□□□□□ -2.03
UBP16YPL072W UTH1P36135 365 aa2.4□□□□□ -2.03
UBP16YPL072W OSW5P40219 148 aa2.4□□□□□ -2.03
UBP16YPL072W SNL1P40548 159 aa2.4□□□□□ -2.03
UBP16YPL072W NAS2P40555 220 aa2.4□□□□□ -2.03
UBP16YPL072W YPS6P40583 537 aa2.4□□□□□ -2.03
UBP16YPL072W PHB2P50085 310 aa2.4□□□□□ -2.03
UBP16YPL072W RTT102P53330 157 aa2.4□□□□□ -2.03
UBP16YPL072W ARP5P53946 755 aa2.4□□□□□ -2.03
UBP16YPL072W STD1Q02794 444 aa2.4□□□□□ -2.03
UBP16YPL072W PRP3Q03338 469 aaPredicted RBP2.4□□□□□ -2.03
UBP16YPL072W YMR310CQ04867 317 aaPredicted RBP2.4□□□□□ -2.03
UBP16YPL072W SKI7Q08491 747 aaPredicted RBP2.4□□□□□ -2.03
UBP16YPL072W YPR022CQ12139 1133 aa2.4□□□□□ -2.03
UBP16YPL072W CEX1Q12453 761 aa2.4□□□□□ -2.03
UBP16YPL072W YDL012CQ12489 107 aa2.4□□□□□ -2.03
UBP16YPL072W TEF1P02994 458 aaKnown RBP2.39□□□□□ -2.03
UBP16YPL072W IMA3P0CW40 589 aa2.39□□□□□ -2.03
UBP16YPL072W IMA4P0CW41 589 aa2.39□□□□□ -2.03
UBP16YPL072W PCL1P24867 279 aa2.39□□□□□ -2.03
UBP16YPL072W CTR86P25355 563 aa2.39□□□□□ -2.03
UBP16YPL072W NIP1P32497 812 aaKnown RBP2.39□□□□□ -2.03
UBP16YPL072W SUR1P33300 382 aa2.39□□□□□ -2.03
UBP16YPL072W YBR137WP38276 179 aa2.39□□□□□ -2.03
UBP16YPL072W SPP381P38282 291 aaPredicted RBP2.39□□□□□ -2.03
UBP16YPL072W MEP1P40260 492 aa2.39□□□□□ -2.03
UBP16YPL072W ATM1P40416 690 aa2.39□□□□□ -2.03
UBP16YPL072W YNR048WP53740 393 aa2.39□□□□□ -2.03
UBP16YPL072W URH1Q04179 340 aa2.39□□□□□ -2.03
UBP16YPL072W VTI1Q04338 217 aa2.39□□□□□ -2.03
UBP16YPL072W RRP9Q06506 573 aaKnown RBP2.39□□□□□ -2.03
UBP16YPL072W IMA2Q08295 589 aa2.39□□□□□ -2.03
UBP16YPL072W TRP1P00912 224 aa2.38□□□□□ -2.03
UBP16YPL072W MAS1P10507 462 aa2.38□□□□□ -2.03
UBP16YPL072W ARF1P11076 181 aaKnown RBP2.38□□□□□ -2.03
UBP16YPL072W THR4P16120 514 aaKnown RBP2.38□□□□□ -2.03
UBP16YPL072W PSO2P30620 661 aa2.38□□□□□ -2.03
UBP16YPL072W HMX1P32339 317 aa2.38□□□□□ -2.03
UBP16YPL072W SKN1P33336 771 aa2.38□□□□□ -2.03
UBP16YPL072W MRP21P38175 177 aa2.38□□□□□ -2.03
UBP16YPL072W RRF1P38771 230 aa2.38□□□□□ -2.03
UBP16YPL072W YDR089WP38966 869 aa2.38□□□□□ -2.03
UBP16YPL072W YHC3P47040 408 aa2.38□□□□□ -2.03
UBP16YPL072W YNL146WP53906 100 aa2.38□□□□□ -2.03
UBP16YPL072W APJ1P53940 528 aa2.38□□□□□ -2.03
UBP16YPL072W UTP6Q02354 440 aaKnown RBP2.38□□□□□ -2.03
UBP16YPL072W APC2Q12440 853 aa2.38□□□□□ -2.03
UBP16YPL072W PFK27Q12471 397 aaPredicted RBP2.38□□□□□ -2.03
UBP16YPL072W YIL002W-AQ3E7Z5 69 aa2.38□□□□□ -2.03
UBP16YPL072W ATP1P07251 545 aaKnown RBP2.37□□□□□ -2.03
UBP16YPL072W DAL5P15365 543 aa2.37□□□□□ -2.03
UBP16YPL072W SLY1P22213 666 aa2.37□□□□□ -2.03
UBP16YPL072W KKQ8P36004 724 aa2.37□□□□□ -2.03
UBP16YPL072W EBP2P36049 427 aaKnown RBP2.37□□□□□ -2.03
UBP16YPL072W EFM3P47163 339 aa2.37□□□□□ -2.03
UBP16YPL072W YMR111CQ04461 462 aaPredicted RBP2.37□□□□□ -2.03
UBP16YPL072W NDE2Q07500 545 aa2.37□□□□□ -2.03
UBP16YPL072W IRC25Q07951 179 aa2.37□□□□□ -2.03
UBP16YPL072W SNX3Q08826 162 aaKnown RBP2.37□□□□□ -2.03
UBP16YPL072W ORT1Q12375 292 aa2.37□□□□□ -2.03
UBP16YPL072W OPI3P05375 206 aa2.37□□□□□ -2.03
UBP16YPL072W TPK3P05986 398 aa2.37□□□□□ -2.03
UBP16YPL072W RNR2P09938 399 aaKnown RBP2.37□□□□□ -2.03
UBP16YPL072W RPL12AP0CX53 165 aaKnown RBP2.37□□□□□ -2.03
UBP16YPL072W RPL12BP0CX54 165 aa2.37□□□□□ -2.03
UBP16YPL072W GCD2P12754 651 aaPredicted RBP2.37□□□□□ -2.03
UBP16YPL072W HSP26P15992 214 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
UBP16YPL072W POP5P28005 173 aa2.37□□□□□ -2.03
UBP16YPL072W MSK1P32048 576 aa2.37□□□□□ -2.03
UBP16YPL072W SKT5P34226 696 aa2.37□□□□□ -2.03
UBP16YPL072W RTT105P40063 208 aa2.37□□□□□ -2.03
UBP16YPL072W YGL114WP53134 725 aa2.37□□□□□ -2.03
UBP16YPL072W ALF1P53904 254 aa2.37□□□□□ -2.03
UBP16YPL072W URC2Q04411 772 aa2.37□□□□□ -2.03
UBP16YPL072W YLR297WQ05899 129 aa2.37□□□□□ -2.03
UBP16YPL072W ECM7Q06200 448 aa2.37□□□□□ -2.03
UBP16YPL072W ARR1Q06596 294 aa2.37□□□□□ -2.03
UBP16YPL072W LDS2Q08218 356 aa2.37□□□□□ -2.03
UBP16YPL072W TPT1Q12272 230 aaKnown RBP2.37□□□□□ -2.03
UBP16YPL072W RNH203Q12338 110 aa2.37□□□□□ -2.03
UBP16YPL072W KAR9P32526 644 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms