RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W FSH3Q99369 266 aa2.16□□□□□ -2.06
VPS16YPL045W TDH1P00360 332 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W SSA3P09435 649 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W AMD1P15274 810 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W MEK1P24719 497 aaPredicted RBP2.16□□□□□ -2.06
VPS16YPL045W SLM5P25345 492 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W YCL068CP25593 260 aa2.16□□□□□ -2.06
VPS16YPL045W PAD1P33751 242 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
VPS16YPL045W COY1P34237 679 aa2.16□□□□□ -2.06
VPS16YPL045W SPT10P35208 640 aa2.16□□□□□ -2.06
VPS16YPL045W BFR1P38934 470 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
VPS16YPL045W LCP5P40079 357 aaPredicted RBP2.16□□□□□ -2.06
VPS16YPL045W CDC40P40968 455 aaPredicted RBP2.16□□□□□ -2.06
VPS16YPL045W TOS2P50078 622 aa2.16□□□□□ -2.06
VPS16YPL045W PHB2P50085 310 aa2.16□□□□□ -2.06
VPS16YPL045W LSB1P53281 241 aa2.16□□□□□ -2.06
VPS16YPL045W FRE4P53746 719 aa2.16□□□□□ -2.06
VPS16YPL045W IDP3P53982 420 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W YPL068CQ02749 293 aa2.16□□□□□ -2.06
VPS16YPL045W PNG1Q02890 363 aa2.16□□□□□ -2.06
VPS16YPL045W CSI1Q04368 295 aa2.16□□□□□ -2.06
VPS16YPL045W SYO1Q07395 620 aa2.16□□□□□ -2.06
VPS16YPL045W LDS2Q08218 356 aa2.16□□□□□ -2.06
VPS16YPL045W BSC1Q12140 328 aa2.16□□□□□ -2.06
VPS16YPL045W TY3A-GQ12173 290 aa2.16□□□□□ -2.06
VPS16YPL045W GLE1Q12315 538 aa2.16□□□□□ -2.06
VPS16YPL045W TY3A-IQ99219 290 aa2.16□□□□□ -2.06
VPS16YPL045W BCK1Q01389 1478 aa2.16□□□□□ -2.06
VPS16YPL045W MLP1Q02455 1875 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W TY4B-HP0C2J7 1802 aa2.15□□□□□ -2.06
VPS16YPL045W TY4B-JP47024 1803 aa2.15□□□□□ -2.06
VPS16YPL045W CAR2P07991 424 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W YLL053CP0CD98 152 aa2.15□□□□□ -2.06
VPS16YPL045W ARF1P11076 181 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W RNA1P11745 407 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W MSS116P15424 664 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W SPO12P17123 173 aa2.15□□□□□ -2.06
VPS16YPL045W CKI1P20485 582 aa2.15□□□□□ -2.06
VPS16YPL045W SAR1P20606 190 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W YUR1P26725 428 aa2.15□□□□□ -2.06
VPS16YPL045W RAD23P32628 398 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W FRE2P36033 711 aa2.15□□□□□ -2.06
VPS16YPL045W YPK3P38070 525 aa2.15□□□□□ -2.06
VPS16YPL045W RIM2P38127 377 aa2.15□□□□□ -2.06
VPS16YPL045W CTM1P38818 585 aa2.15□□□□□ -2.06
VPS16YPL045W LYS1P38998 373 aaRIP-Chip data2.15□□□□□ -2.06not detected
VPS16YPL045W SCC4P40090 624 aa2.15□□□□□ -2.06
VPS16YPL045W MMF1P40185 145 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W RTS2P40962 232 aa2.15□□□□□ -2.06
VPS16YPL045W LAM5P43560 674 aa2.15□□□□□ -2.06
VPS16YPL045W TOS3P43637 560 aa2.15□□□□□ -2.06
VPS16YPL045W EMC2P47133 292 aaKnown RBP2.15□□□□□ -2.06
VPS16YPL045W STE24P47154 453 aa2.15□□□□□ -2.06
VPS16YPL045W YGL242CP53066 181 aa2.15□□□□□ -2.06
VPS16YPL045W RSC9Q03124 581 aa2.15□□□□□ -2.06
VPS16YPL045W MSS11Q03825 758 aa2.15□□□□□ -2.06
VPS16YPL045W SEG1Q04279 960 aa2.15□□□□□ -2.06
VPS16YPL045W AIM33Q04516 312 aa2.15□□□□□ -2.06
VPS16YPL045W APC4Q04601 652 aa2.15□□□□□ -2.06
VPS16YPL045W ASA1Q06822 443 aa2.15□□□□□ -2.06
VPS16YPL045W YLL007CQ07799 665 aa2.15□□□□□ -2.06
VPS16YPL045W YRF1-2P40105 1681 aa2.15□□□□□ -2.07
VPS16YPL045W RPL18AP0CX49 186 aaKnown RBP2.15□□□□□ -2.07
VPS16YPL045W RPL18BP0CX50 186 aaKnown RBP2.15□□□□□ -2.07
VPS16YPL045W ZUO1P32527 433 aaKnown RBP2.15□□□□□ -2.07
VPS16YPL045W COT1P32798 439 aa2.15□□□□□ -2.07
VPS16YPL045W ECM15P35195 104 aa2.15□□□□□ -2.07
VPS16YPL045W KKQ8P36004 724 aa2.15□□□□□ -2.07
VPS16YPL045W YCR041WP37265 110 aa2.15□□□□□ -2.07
VPS16YPL045W RTC2P38279 296 aa2.15□□□□□ -2.07
VPS16YPL045W VPS52P39904 641 aa2.15□□□□□ -2.07
VPS16YPL045W YDL186WP48568 277 aa2.15□□□□□ -2.07
VPS16YPL045W IZH1Q03419 316 aa2.15□□□□□ -2.07
VPS16YPL045W RSN1Q03516 953 aa2.15□□□□□ -2.07
VPS16YPL045W OSW1Q08692 278 aa2.15□□□□□ -2.07
VPS16YPL045W AFT2Q08957 416 aa2.15□□□□□ -2.07
VPS16YPL045W HEM2P05373 342 aa2.14□□□□□ -2.07
VPS16YPL045W PRP16P15938 1071 aaPredicted RBP2.14□□□□□ -2.07
VPS16YPL045W EXO70P19658 623 aa2.14□□□□□ -2.07
VPS16YPL045W LSB5P25369 354 aa2.14□□□□□ -2.07
VPS16YPL045W YCR100CP25606 316 aa2.14□□□□□ -2.07
VPS16YPL045W CIN8P27895 1000 aa2.14□□□□□ -2.07
VPS16YPL045W TOA2P32774 122 aa2.14□□□□□ -2.07
VPS16YPL045W YBR056WP38081 501 aa2.14□□□□□ -2.07
VPS16YPL045W LYS12P40495 371 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W CFD1P40558 293 aa2.14□□□□□ -2.07
VPS16YPL045W LSC1P53598 329 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W ESBP6P53918 673 aa2.14□□□□□ -2.07
VPS16YPL045W IRC15Q02733 499 aa2.14□□□□□ -2.07
VPS16YPL045W RLI1Q03195 608 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W CWC21Q03375 135 aaKnown RBP2.14□□□□□ -2.07
VPS16YPL045W MRPL51Q06090 140 aaPredicted RBP2.14□□□□□ -2.07
VPS16YPL045W ARV1Q06541 321 aa2.14□□□□□ -2.07
VPS16YPL045W SRL2Q12020 392 aa2.14□□□□□ -2.07
VPS16YPL045W YOR338WQ99326 363 aa2.14□□□□□ -2.07
VPS16YPL045W MAS2P11914 482 aa2.14□□□□□ -2.07
VPS16YPL045W CLN3P13365 580 aa2.14□□□□□ -2.07
VPS16YPL045W MBR1P23493 339 aa2.14□□□□□ -2.07
VPS16YPL045W MXR2P25566 168 aa2.14□□□□□ -2.07
VPS16YPL045W ITR1P30605 584 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms