RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA4	YDR119W	YDR222W	Q04925	415 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	CDA2	Q06703	312 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	ACK1	Q07622	623 aa	Predicted RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	RRI1	Q12468	440 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	NCB2	Q92317	146 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	THP2	O13539	261 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	GAL4	P04386	881 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	WHI2	P12611	486 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	CLN3	P13365	580 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	CBF1	P17106	351 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	TYR1	P20049	452 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	FUN19	P28003	413 aa	Predicted RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	PEX3	P28795	441 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	MRPL9	P31334	269 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	SAC1	P32368	623 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	LYS12	P40495	371 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	YIL001W	P40560	513 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	UBP8	P50102	471 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	PYK2	P52489	506 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	PMT5	P52867	743 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	YIF1	P53845	314 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	SAM50	P53969	484 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	MPS1	P54199	764 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	NUP116	Q02630	1113 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	SNU56	Q03782	492 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	RVB1	Q03940	463 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	GFD1	Q04839	188 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	HRD3	Q05787	833 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	YLR224W	Q05947	369 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	SPO77	Q06134	477 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	CDD1	Q06549	142 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	YOR365C	Q08844	703 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	SAM4	Q08985	325 aa	Known RBP	2.99	□□□□□ -1.93
VBA4	YDR119W	MSH5	Q12175	901 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	AI5_BETA	Q9ZZX0	354 aa		2.99	□□□□□ -1.93
VBA4	YDR119W	TRP4	P07285	380 aa	Predicted RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	MAS2	P11914	482 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	UTR1	P21373	530 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	ADE1	P27616	306 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	VMA5	P31412	392 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	VMA6	P32366	345 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	RAD24	P32641	659 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	CBT1	P36038	271 aa	Predicted RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	MIA40	P36046	403 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	RSM22	P36056	628 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YRB1	P41920	201 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	COX16	P47081	118 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	TAF6	P53040	516 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YTP1	P53584	459 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	TRM112	P53738	135 aa	Predicted RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	MRPL22	P53881	309 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	KRE28	Q04431	385 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	SNT309	Q06091	175 aa	Predicted RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	VPS74	Q06385	345 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	ENB1	Q08299	606 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YLR049C	Q12110	428 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	SUT2	Q12286	268 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	AHA1	Q12449	350 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	RAD52	P06778	471 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	IMA3	P0CW40	589 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	IMA4	P0CW41	589 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	MRP1	P10662	321 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	MXR2	P25566	168 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	ERG9	P29704	444 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	COQ2	P32378	372 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	LIP5	P32875	414 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	SKT5	P34226	696 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	MYO3	P36006	1272 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	MIC12	P38341	106 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	PCL6	P40038	420 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	PMT6	P42934	759 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	STB4	P50104	949 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YPR003C	P53394	754 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	ALG11	P53954	548 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	GCN5	Q03330	439 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YDR387C	Q04162	555 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	IVY1	Q04934	453 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	DCR2	Q05924	578 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	ATG26	Q06321	1198 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	BER1	Q06688	274 aa	Known RBP	2.98	□□□□□ -1.93
VBA4	YDR119W	LDS2	Q08218	356 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	IMA2	Q08295	589 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YLL056C	Q12177	298 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	YLR108C	Q12259	485 aa		2.98	□□□□□ -1.93
VBA4	YDR119W	MES1	P00958	751 aa	Known RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	ATP1	P07251	545 aa	Known RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	ARF1	P11076	181 aa	Known RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	HPR1	P17629	752 aa	Known RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	CMK2	P22517	447 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	DPB2	P24482	689 aa	Predicted RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	TMT1	P32643	299 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	SUL1	P38359	859 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	ARP1	P38696	384 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	RTC3	P38804	111 aa	Predicted RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	YAL037W	P39728	267 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	COA1	P40452	197 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	ERG10	P41338	398 aa	Known RBP	2.97	□□□□□ -1.93
VBA4	YDR119W	TRS85	P46944	698 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	YPT11	P48559	417 aa		2.97	□□□□□ -1.93
VBA4	YDR119W	SPT20	P50875	604 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms