RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	ANS1	P38832	159 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	LIN1	P38852	340 aa	Predicted RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	YHR177W	P38867	453 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	YER010C	P40011	234 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	NAS6	P50086	228 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	UBC9	P50623	157 aa	Predicted RBP	4.11	□□□□□ -1.75
SAF1	YBR280C	YNR068C	P53754	272 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	SWP1	Q02795	286 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	INP1	Q03694	420 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	BUR2	Q05949	395 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	SPE4	Q12455	300 aa		4.11	□□□□□ -1.75
SAF1	YBR280C	RAS2	P01120	322 aa	Known RBP	4.1	□□□□□ -1.75
SAF1	YBR280C	RVS161	P25343	265 aa	Known RBP	4.1	□□□□□ -1.75
SAF1	YBR280C	ILV6	P25605	309 aa	Known RBP	4.1	□□□□□ -1.75
SAF1	YBR280C	YKR073C	P36153	106 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	SCO2	P38072	301 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	SAP30	P38429	201 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	YJL193W	P39542	402 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	ECM10	P39987	644 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	YEN1	P40028	759 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	SHO1	P40073	367 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	VPS60	Q03390	229 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	YLR036C	Q07986	203 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	SWM1	Q12379	170 aa		4.1	□□□□□ -1.75
SAF1	YBR280C	STE6	P12866	1290 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	RPO26	P20435	155 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	AIM17	P23180	465 aa	Known RBP	4.09	□□□□□ -1.75
SAF1	YBR280C	DBR1	P24309	405 aa	Known RBP	4.09	□□□□□ -1.75
SAF1	YBR280C	STE14	P32584	239 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	YPT7	P32939	208 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	EXO84	P38261	753 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	PRS3	P38689	320 aa	Known RBP	4.09	□□□□□ -1.75
SAF1	YBR280C	ARN2	P38724	620 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	YHL037C	P38733	133 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	NSG1	P38837	291 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	PFK26	P40433	827 aa	Known RBP	4.09	□□□□□ -1.75
SAF1	YBR280C	AAD10	P47182	288 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	MSY1	P48527	492 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	TOM22	P49334	152 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	SOK2	P53438	785 aa	Predicted RBP	4.09	□□□□□ -1.75
SAF1	YBR280C	TMC1	Q08422	150 aa	Predicted RBP	4.09	□□□□□ -1.75
SAF1	YBR280C	BSC1	Q12140	328 aa		4.09	□□□□□ -1.75
SAF1	YBR280C	UNG1	P12887	359 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	PDX1	P16451	410 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	NGG1	P32494	702 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	YOR062C	P36025	268 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	YNL208W	P40159	199 aa	Known RBP	4.09	□□□□□ -1.76
SAF1	YBR280C	GPP1	P41277	250 aa	Known RBP	4.09	□□□□□ -1.76
SAF1	YBR280C	PAC10	P48363	199 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	LSG1	P53145	640 aa	Known RBP	4.09	□□□□□ -1.76
SAF1	YBR280C	YNL010W	P53981	241 aa	Known RBP	4.09	□□□□□ -1.76
SAF1	YBR280C	TVP15	Q03860	143 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	EMG1	Q06287	252 aa	Known RBP	4.09	□□□□□ -1.76
SAF1	YBR280C	MRL1	Q06815	381 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	RAF1	Q06891	181 aa		4.09	□□□□□ -1.76
SAF1	YBR280C	BLM10	P43583	2143 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	RNA1	P11745	407 aa	Known RBP	4.08	□□□□□ -1.76
SAF1	YBR280C	CBS1	P14066	229 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	MDH2	P22133	377 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	CTR86	P25355	563 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	DMC1	P25453	334 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	TOD6	P34219	525 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	YKL187C	P34231	750 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	YBL029W	P38201	376 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	YJL068C	P40363	299 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	AYR1	P40471	297 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	AVT7	P40501	490 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	ARF3	P40994	183 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
SAF1	YBR280C	LEM3	P42838	414 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	YFL051C	P43552	160 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	YFR054C	P43622	192 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	OGG1	P53397	376 aa	Predicted RBP	4.08	□□□□□ -1.76
SAF1	YBR280C	RHO5	P53879	331 aa	Known RBP	4.08	□□□□□ -1.76
SAF1	YBR280C	YMR265C	Q03508	461 aa	Known RBP	4.08	□□□□□ -1.76
SAF1	YBR280C	SNX41	Q04053	625 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	API2	Q04413	109 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	UAF30	Q08747	228 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	FMP40	Q08968	688 aa	Predicted RBP	4.08	□□□□□ -1.76
SAF1	YBR280C	SNF8	Q12483	233 aa		4.08	□□□□□ -1.76
SAF1	YBR280C	DET1	Q99288	334 aa	Known RBP	4.08	□□□□□ -1.76
SAF1	YBR280C	CAR2	P07991	424 aa	Known RBP	4.07	□□□□□ -1.76
SAF1	YBR280C	PRB1	P09232	635 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	KSS1	P14681	368 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	RPT5	P33297	434 aa	Known RBP	4.07	□□□□□ -1.76
SAF1	YBR280C	MRPS5	P33759	307 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	DTR1	P38125	572 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	FAA2	P39518	744 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	YTA6	P40328	754 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	TEX1	P53851	422 aa	Known RBP	4.07	□□□□□ -1.76
SAF1	YBR280C	REX2	P54964	269 aa	Known RBP	4.07	□□□□□ -1.76
SAF1	YBR280C	YMR010W	Q03687	405 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	STE23	Q06010	1027 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	PML1	Q07930	204 aa	Predicted RBP	4.07	□□□□□ -1.76
SAF1	YBR280C	GPN2	Q08726	347 aa	Predicted RBP	4.07	□□□□□ -1.76
SAF1	YBR280C	JLP1	Q12358	412 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	GEP5	Q12393	293 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	SAN1	P22470	610 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	NUP2	P32499	720 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	PTC1	P35182	281 aa		4.07	□□□□□ -1.76
SAF1	YBR280C	MRPL39	P36533	70 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms