RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YFH1Q07540 174 aa2.84□□□□□ -1.95
RPC40YPR110C TPT1Q12272 230 aaKnown RBP2.84□□□□□ -1.95
RPC40YPR110C YER078W-AQ3E7A2 54 aa2.84□□□□□ -1.95
RPC40YPR110C MYO4P32492 1471 aa2.84□□□□□ -1.96
RPC40YPR110C CHD1P32657 1468 aa2.84□□□□□ -1.96
RPC40YPR110C NTE1Q04958 1679 aa2.83□□□□□ -1.96
RPC40YPR110C RPL6BP05739 176 aaKnown RBP2.83□□□□□ -1.96
RPC40YPR110C DAP2P18962 818 aa2.83□□□□□ -1.96
RPC40YPR110C SLY1P22213 666 aa2.83□□□□□ -1.96
RPC40YPR110C PHO91P27514 894 aa2.83□□□□□ -1.96
RPC40YPR110C NRP1P32770 719 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
RPC40YPR110C QDR3P38227 689 aa2.83□□□□□ -1.96
RPC40YPR110C YSW1P38280 609 aa2.83□□□□□ -1.96
RPC40YPR110C STP2P38704 541 aa2.83□□□□□ -1.96
RPC40YPR110C KRE9P39005 276 aa2.83□□□□□ -1.96
RPC40YPR110C CAJ1P39101 391 aa2.83□□□□□ -1.96
RPC40YPR110C SIM1P40472 476 aa2.83□□□□□ -1.96
RPC40YPR110C CHS6P40955 746 aa2.83□□□□□ -1.96
RPC40YPR110C ASN2P49090 572 aaKnown RBP2.83□□□□□ -1.96
RPC40YPR110C AZR1P50080 613 aa2.83□□□□□ -1.96
RPC40YPR110C PHB2P50085 310 aa2.83□□□□□ -1.96
RPC40YPR110C BOR1P53838 576 aa2.83□□□□□ -1.96
RPC40YPR110C MEH1Q02205 184 aa2.83□□□□□ -1.96
RPC40YPR110C RPL6AQ02326 176 aaKnown RBP2.83□□□□□ -1.96
RPC40YPR110C YPL107WQ02873 248 aa2.83□□□□□ -1.96
RPC40YPR110C IPK1Q06667 281 aa2.83□□□□□ -1.96
RPC40YPR110C YLR108CQ12259 485 aa2.83□□□□□ -1.96
RPC40YPR110C FRE6Q12473 712 aa2.83□□□□□ -1.96
RPC40YPR110C RPA190P10964 1664 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C MLP2P40457 1679 aa2.82□□□□□ -1.96
RPC40YPR110C CDC21P06785 304 aa2.82□□□□□ -1.96
RPC40YPR110C DST1P07273 309 aa2.82□□□□□ -1.96
RPC40YPR110C TPM1P17536 199 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C MSP1P28737 362 aa2.82□□□□□ -1.96
RPC40YPR110C SDH3P33421 198 aa2.82□□□□□ -1.96
RPC40YPR110C RRP1P35178 278 aaPredicted RBP2.82□□□□□ -1.96
RPC40YPR110C YHR218WP38899 603 aa2.82□□□□□ -1.96
RPC40YPR110C YER079WP40052 210 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C PAC11P40960 533 aa2.82□□□□□ -1.96
RPC40YPR110C EPL1P43572 832 aa2.82□□□□□ -1.96
RPC40YPR110C YGR016WP53209 190 aa2.82□□□□□ -1.96
RPC40YPR110C GOR1P53839 350 aa2.82□□□□□ -1.96
RPC40YPR110C IMP4P53941 290 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C URC2Q04411 772 aa2.82□□□□□ -1.96
RPC40YPR110C BCH1Q05029 724 aa2.82□□□□□ -1.96
RPC40YPR110C NOP6Q07623 225 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C ESA1Q08649 445 aa2.82□□□□□ -1.96
RPC40YPR110C SNX3Q08826 162 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C SMF3Q12078 473 aaPredicted RBP2.82□□□□□ -1.96
RPC40YPR110C ERV2Q12284 196 aa2.82□□□□□ -1.96
RPC40YPR110C RNH203Q12338 110 aa2.82□□□□□ -1.96
RPC40YPR110C SRN2Q99176 213 aa2.82□□□□□ -1.96
RPC40YPR110C PAN1P32521 1480 aa2.82□□□□□ -1.96
RPC40YPR110C MMS22Q06164 1454 aa2.82□□□□□ -1.96
RPC40YPR110C TY1B-JR2P47100 1755 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C TY1B-ER2Q03619 1755 aa2.82□□□□□ -1.96
RPC40YPR110C TY1B-MR1Q04214 1755 aa2.82□□□□□ -1.96
RPC40YPR110C TY1B-MR2Q04670 1755 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C TY1B-LR1Q12088 1755 aaKnown RBP2.82□□□□□ -1.96
RPC40YPR110C TY1B-NL1Q12112 1755 aa2.82□□□□□ -1.96
RPC40YPR110C TY1B-GR1Q12141 1755 aa2.82□□□□□ -1.96
RPC40YPR110C TY1B-BLQ12490 1755 aa2.82□□□□□ -1.96
RPC40YPR110C NFT1P0CE68 1218 aa2.81□□□□□ -1.96
RPC40YPR110C RPL12AP0CX53 165 aaKnown RBP2.81□□□□□ -1.96
RPC40YPR110C RPL12BP0CX54 165 aa2.81□□□□□ -1.96
RPC40YPR110C CPR3P25719 182 aa2.81□□□□□ -1.96
RPC40YPR110C POT1P27796 417 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
RPC40YPR110C SKN1P33336 771 aa2.81□□□□□ -1.96
RPC40YPR110C LAS1P36146 502 aaPredicted RBP2.81□□□□□ -1.96
RPC40YPR110C ATP3P38077 311 aaKnown RBP2.81□□□□□ -1.96
RPC40YPR110C YBR056WP38081 501 aa2.81□□□□□ -1.96
RPC40YPR110C ADH5P38113 351 aaKnown RBP2.81□□□□□ -1.96
RPC40YPR110C WSS1P38838 269 aa2.81□□□□□ -1.96
RPC40YPR110C MTC6P38849 526 aa2.81□□□□□ -1.96
RPC40YPR110C JLP2P40206 208 aa2.81□□□□□ -1.96
RPC40YPR110C YFL067WP43537 175 aa2.81□□□□□ -1.96
RPC40YPR110C STE24P47154 453 aa2.81□□□□□ -1.96
RPC40YPR110C SCS3P53012 380 aa2.81□□□□□ -1.96
RPC40YPR110C ROG1P53118 685 aa2.81□□□□□ -1.96
RPC40YPR110C RTT102P53330 157 aa2.81□□□□□ -1.96
RPC40YPR110C TOF1P53840 1238 aa2.81□□□□□ -1.96
RPC40YPR110C YTH1Q06102 208 aaPredicted RBP2.81□□□□□ -1.96
RPC40YPR110C RAX1Q08760 435 aa2.81□□□□□ -1.96
RPC40YPR110C NFI1Q12216 726 aa2.81□□□□□ -1.96
RPC40YPR110C CEX1Q12453 761 aa2.81□□□□□ -1.96
RPC40YPR110C SPP41P38904 1435 aa2.81□□□□□ -1.96
RPC40YPR110C VTH1P40438 1549 aa2.81□□□□□ -1.96
RPC40YPR110C VTH2P40890 1549 aa2.81□□□□□ -1.96
RPC40YPR110C DNF1P32660 1571 aa2.81□□□□□ -1.96
RPC40YPR110C RPO21P04050 1733 aaKnown RBP2.8□□□□□ -1.96
RPC40YPR110C SPT7P35177 1332 aa2.8□□□□□ -1.96
RPC40YPR110C CPR4P25334 318 aa2.8□□□□□ -1.96
RPC40YPR110C YCL068CP25593 260 aa2.8□□□□□ -1.96
RPC40YPR110C FAA1P30624 700 aaKnown RBP2.8□□□□□ -1.96
RPC40YPR110C MUD1P32605 298 aaKnown RBP2.8□□□□□ -1.96
RPC40YPR110C TOA2P32774 122 aa2.8□□□□□ -1.96
RPC40YPR110C YSC83P32792 385 aa2.8□□□□□ -1.96
RPC40YPR110C UIP5P36137 443 aa2.8□□□□□ -1.96
RPC40YPR110C YBR139WP38109 508 aa2.8□□□□□ -1.96
RPC40YPR110C CCT4P39078 528 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms