RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SCD6P45978 349 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06 RIP-Chip
VPS16YPL045W BNA3P47039 444 aaKnown RBP2.18□□□□□ -2.06
VPS16YPL045W YHC3P47040 408 aa2.18□□□□□ -2.06
VPS16YPL045W PMT5P52867 743 aa2.18□□□□□ -2.06
VPS16YPL045W PCP1P53259 346 aa2.18□□□□□ -2.06
VPS16YPL045W NRD1P53617 575 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
VPS16YPL045W ATP23P53722 227 aa2.18□□□□□ -2.06
VPS16YPL045W DBP6P53734 629 aaKnown RBP2.18□□□□□ -2.06
VPS16YPL045W GPI15P53961 229 aa2.18□□□□□ -2.06
VPS16YPL045W SPO19Q03029 223 aa2.18□□□□□ -2.06
VPS16YPL045W NUP53Q03790 475 aa2.18□□□□□ -2.06
VPS16YPL045W ARR1Q06596 294 aa2.18□□□□□ -2.06
VPS16YPL045W IMA2Q08295 589 aa2.18□□□□□ -2.06
VPS16YPL045W YLL056CQ12177 298 aa2.18□□□□□ -2.06
VPS16YPL045W STE2D6VTK4 431 aa2.18□□□□□ -2.06
VPS16YPL045W HIS4P00815 799 aaKnown RBP2.18□□□□□ -2.06
VPS16YPL045W DST1P07273 309 aa2.18□□□□□ -2.06
VPS16YPL045W SPO11P23179 398 aa2.18□□□□□ -2.06
VPS16YPL045W YCR007CP25354 239 aa2.18□□□□□ -2.06
VPS16YPL045W GID7P25569 745 aa2.18□□□□□ -2.06
VPS16YPL045W HMX1P32339 317 aa2.18□□□□□ -2.06
VPS16YPL045W OSH3P38713 996 aaKnown RBP2.18□□□□□ -2.06
VPS16YPL045W BZZ1P38822 633 aa2.18□□□□□ -2.06
VPS16YPL045W SPT8P38915 602 aa2.18□□□□□ -2.06
VPS16YPL045W ALP1P38971 573 aa2.18□□□□□ -2.06
VPS16YPL045W IAH1P41734 238 aa2.18□□□□□ -2.06
VPS16YPL045W SPG5P42933 373 aa2.18□□□□□ -2.06
VPS16YPL045W VPS25P47142 202 aa2.18□□□□□ -2.06
VPS16YPL045W YGL185CP53100 379 aa2.18□□□□□ -2.06
VPS16YPL045W YGL114WP53134 725 aa2.18□□□□□ -2.06
VPS16YPL045W MPS1P54199 764 aa2.18□□□□□ -2.06
VPS16YPL045W ERV41Q04651 352 aa2.18□□□□□ -2.06
VPS16YPL045W GLO2Q05584 274 aa2.18□□□□□ -2.06
VPS16YPL045W VAC14Q06708 880 aa2.18□□□□□ -2.06
VPS16YPL045W AAD15Q08361 143 aa2.18□□□□□ -2.06
VPS16YPL045W YLR112WQ12130 139 aa2.18□□□□□ -2.06
VPS16YPL045W ATG34Q12292 412 aa2.18□□□□□ -2.06
VPS16YPL045W FRE7Q12333 620 aa2.18□□□□□ -2.06
VPS16YPL045W AIM45Q12480 344 aaKnown RBP2.18□□□□□ -2.06
VPS16YPL045W HOM2P13663 365 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W URE2P23202 354 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W MSK1P32048 576 aa2.17□□□□□ -2.06
VPS16YPL045W PHD1P36093 366 aa2.17□□□□□ -2.06
VPS16YPL045W MRPL37P36532 105 aa2.17□□□□□ -2.06
VPS16YPL045W HSM3P38348 480 aa2.17□□□□□ -2.06
VPS16YPL045W PRP39P39682 629 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W GAT1P43574 510 aa2.17□□□□□ -2.06
VPS16YPL045W HMS2P47175 358 aa2.17□□□□□ -2.06
VPS16YPL045W YNL146WP53906 100 aa2.17□□□□□ -2.06
VPS16YPL045W TLG1Q03322 224 aa2.17□□□□□ -2.06
VPS16YPL045W BNA5Q05979 453 aa2.17□□□□□ -2.06
VPS16YPL045W IRC10Q08118 586 aa2.17□□□□□ -2.06
VPS16YPL045W THI20Q08224 551 aa2.17□□□□□ -2.06
VPS16YPL045W PDR11P40550 1411 aa2.17□□□□□ -2.06
VPS16YPL045W DBR1P24309 405 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W MGR1P25573 417 aa2.17□□□□□ -2.06
VPS16YPL045W ADY2P25613 283 aa2.17□□□□□ -2.06
VPS16YPL045W BUD2P33314 1104 aa2.17□□□□□ -2.06
VPS16YPL045W SKN1P33336 771 aa2.17□□□□□ -2.06
VPS16YPL045W SPC34P36131 295 aa2.17□□□□□ -2.06
VPS16YPL045W TOM71P38825 639 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W ISC1P40015 477 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W ATM1P40416 690 aa2.17□□□□□ -2.06
VPS16YPL045W SNL1P40548 159 aa2.17□□□□□ -2.06
VPS16YPL045W GTO1P48239 356 aa2.17□□□□□ -2.06
VPS16YPL045W MND1P53102 219 aa2.17□□□□□ -2.06
VPS16YPL045W VOA1P53262 265 aa2.17□□□□□ -2.06
VPS16YPL045W RET3P53600 189 aa2.17□□□□□ -2.06
VPS16YPL045W YNL234WP53857 426 aa2.17□□□□□ -2.06
VPS16YPL045W MMT1Q03218 510 aa2.17□□□□□ -2.06
VPS16YPL045W RRG8Q06109 277 aa2.17□□□□□ -2.06
VPS16YPL045W NRT1Q08485 598 aa2.17□□□□□ -2.06
VPS16YPL045W YDR262WQ12331 272 aa2.17□□□□□ -2.06
VPS16YPL045W PAA1Q12447 191 aaKnown RBP2.17□□□□□ -2.06
VPS16YPL045W SPO24Q3E752 67 aa2.17□□□□□ -2.06
VPS16YPL045W RPS16AP0CX51 143 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W RPS16BP0CX52 143 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W UNG1P12887 359 aa2.16□□□□□ -2.06
VPS16YPL045W ACH1P32316 526 aa2.16□□□□□ -2.06
VPS16YPL045W YPS1P32329 569 aa2.16□□□□□ -2.06
VPS16YPL045W FRE1P32791 686 aa2.16□□□□□ -2.06
VPS16YPL045W PDR3P33200 976 aa2.16□□□□□ -2.06
VPS16YPL045W YKL097CP34245 136 aa2.16□□□□□ -2.06
VPS16YPL045W TPO5P36029 618 aa2.16□□□□□ -2.06
VPS16YPL045W PEX18P38855 283 aa2.16□□□□□ -2.06
VPS16YPL045W YJL070CP40361 888 aa2.16□□□□□ -2.06
VPS16YPL045W CSM2P40465 213 aa2.16□□□□□ -2.06
VPS16YPL045W YPT11P48559 417 aa2.16□□□□□ -2.06
VPS16YPL045W YIP1P53039 248 aa2.16□□□□□ -2.06
VPS16YPL045W MPP6P53725 186 aaPredicted RBP2.16□□□□□ -2.06
VPS16YPL045W SAM50P53969 484 aa2.16□□□□□ -2.06
VPS16YPL045W MRPL35Q06678 367 aa2.16□□□□□ -2.06
VPS16YPL045W REX4Q08237 289 aa2.16□□□□□ -2.06
VPS16YPL045W SKI7Q08491 747 aaPredicted RBP2.16□□□□□ -2.06
VPS16YPL045W YPR022CQ12139 1133 aa2.16□□□□□ -2.06
VPS16YPL045W LSP1Q12230 341 aaKnown RBP2.16□□□□□ -2.06
VPS16YPL045W LDB17Q12342 491 aa2.16□□□□□ -2.06
VPS16YPL045W ORT1Q12375 292 aa2.16□□□□□ -2.06
VPS16YPL045W ARP6Q12509 438 aa2.16□□□□□ -2.06
VPS16YPL045W DCP1Q12517 231 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms