RNA–Protein interactions for RNA: YLR288C

MEC3, Transcript of DNA damage and meiotic pachytene checkpoint protein, yeast

Gene MEC3, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MEC3	YLR288C	SDO1	Q07953	250 aa	Known RBP	4.83	□□□□□ -1.64
MEC3	YLR288C	DNL4	Q08387	944 aa	Predicted RBP	4.83	□□□□□ -1.64
MEC3	YLR288C	PEX27	Q08580	376 aa		4.83	□□□□□ -1.64
MEC3	YLR288C	MRH1	Q12117	320 aa	Predicted RBP	4.83	□□□□□ -1.64
MEC3	YLR288C	PKH2	Q12236	1081 aa	Known RBP	4.83	□□□□□ -1.64
MEC3	YLR288C	YDR215C	Q12240	137 aa		4.83	□□□□□ -1.64
MEC3	YLR288C	NPC2	Q12408	173 aa		4.83	□□□□□ -1.64
MEC3	YLR288C	PRP46	Q12417	451 aa	Predicted RBP	4.83	□□□□□ -1.64
MEC3	YLR288C	RMD5	Q12508	421 aa		4.83	□□□□□ -1.64
MEC3	YLR288C	DNF3	Q12674	1656 aa		4.83	□□□□□ -1.64
MEC3	YLR288C	GPH1	P06738	902 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	GDH1	P07262	454 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	CBF1	P17106	351 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	SRP54	P20424	541 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	GPI12	P23797	304 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	KRE2	P27809	442 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	DEG1	P31115	442 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	TPS2	P31688	896 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	PRP18	P33411	251 aa	Predicted RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	TRM2	P33753	639 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	AAP1	P37898	856 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	MMS21	P38632	267 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	BIG1	P38813	335 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	SPC97	P38863	823 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	FMO1	P38866	432 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	PFS1	P38872	237 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	FET3	P38993	636 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	UIP3	P39547	235 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	PIG2	P40187	538 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	VPS73	P53142	486 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	NUP116	Q02630	1113 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	FMP30	Q02883	468 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	IZH1	Q03419	316 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	YMR209C	Q03648	457 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	CTK1	Q03957	528 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	CDC123	Q05791	360 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	THI7	Q05998	598 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	SYO1	Q07395	620 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	CYK3	Q07533	885 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	NSE1	Q07913	336 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	REX4	Q08237	289 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	AFT2	Q08957	416 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	GRE1	Q08969	168 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	YLR122C	Q12312	125 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	NCB2	Q92317	146 aa		4.82	□□□□□ -1.64
MEC3	YLR288C	CHC1	P22137	1653 aa	Known RBP	4.82	□□□□□ -1.64
MEC3	YLR288C	CHS1	P08004	1131 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	CDC6	P09119	513 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	NFT1	P0CE68	1218 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	SNF6	P18888	332 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	CSM1	P25651	190 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	YSC83	P32792	385 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	YHR177W	P38867	453 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	ELO1	P39540	310 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	NDC80	P40460	691 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	AGE2	P40529	298 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	RIP-Chip
MEC3	YLR288C	SNG1	P46950	547 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	BNA3	P47039	444 aa	Known RBP	4.81	□□□□□ -1.64
MEC3	YLR288C	AMA1	P50082	593 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	YGL108C	P53139	140 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	PXR1	P53335	271 aa	Predicted RBP	4.81	□□□□□ -1.64
MEC3	YLR288C	MRPL50	P53724	139 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	TRM112	P53738	135 aa	Predicted RBP	4.81	□□□□□ -1.64
MEC3	YLR288C	VAC7	P53950	1165 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	ADE16	P54113	591 aa	Known RBP	4.81	□□□□□ -1.64
MEC3	YLR288C	ORC3	P54790	616 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	SKI8	Q02793	397 aa	Predicted RBP	4.81	□□□□□ -1.64
MEC3	YLR288C	PRM15	Q03262	622 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	YPL216W	Q08964	1102 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	BAG7	Q12128	409 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	YLR108C	Q12259	485 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	SEY1	Q99287	776 aa		4.81	□□□□□ -1.64
MEC3	YLR288C	RIP1	P08067	215 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	RPS16A	P0CX51	143 aa	Known RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	RPS16B	P0CX52	143 aa	Known RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	FRS2	P15625	503 aa	Known RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	STE18	P18852	110 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	RRT12	P25381	491 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	COQ2	P32378	372 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	MSS1	P32559	526 aa	Predicted RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	SPS19	P32573	292 aa	Known RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	GCG1	P32656	232 aa	Known RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
MEC3	YLR288C	RPC34	P32910	317 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	SPO23	P33757	523 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	AST1	P35183	429 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	CBT1	P36038	271 aa	Predicted RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	SNU114	P36048	1008 aa	Known RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	PRS4	P38063	326 aa	Predicted RBP	4.8	□□□□□ -1.64
MEC3	YLR288C	QDR3	P38227	689 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	ICS2	P38284	255 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	SDH8	P38345	138 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	OPT1	P40897	799 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	ATG27	P46989	271 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	MSY1	P48527	492 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	YDL186W	P48568	277 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	YGL159W	P53110	370 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	FHN1	P53279	174 aa		4.8	□□□□□ -1.64
MEC3	YLR288C	MRS2	Q01926	470 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms