RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	SPP381	P38282	291 aa	Predicted RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	REE1	P40893	198 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RPA34	P47006	233 aa	Predicted RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	YNR068C	P53754	272 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	CAF40	P53829	373 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	YNL234W	P53857	426 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	PDR16	P53860	351 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	DUG3	P53871	357 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	ERO1	Q03103	563 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	SOR2	Q07786	357 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	SIL1	Q08199	421 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RAX1	Q08760	435 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	PKH2	Q12236	1081 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	ICT1	Q12385	394 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RAD9	P14737	1309 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	NUP192	P47054	1683 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	THR4	P16120	514 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	YCR100C	P25606	316 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	GLC7	P32598	312 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	RGT1	P32862	1170 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	YBL028C	P38202	106 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	FAA2	P39518	744 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	STE24	P47154	453 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RRN9	P53437	365 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	UTP6	Q02354	440 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	PPM1	Q04081	328 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RRN11	Q04712	507 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	YPR078C	Q06813	372 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	TIM18	Q08749	192 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RNH203	Q12338	110 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	RRP12	Q12754	1228 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	YLR278C	Q05854	1341 aa		1.38	□□□□□ -2.19
SMC4	YLR086W	ROM2	P51862	1356 aa	Known RBP	1.38	□□□□□ -2.19
SMC4	YLR086W	PHO84	P25297	587 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	PPZ1	P26570	692 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	EFB1	P32471	206 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	KAR9	P32526	644 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	TMT1	P32643	299 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	VAM7	P32912	316 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	PMU1	P36069	295 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SIF2	P38262	535 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	MDM31	P38880	579 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	VRG4	P40107	337 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	CDC40	P40968	455 aa	Predicted RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	POP1	P41812	875 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	IKS1	P47042	667 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	LSC1	P53598	329 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	LGE1	Q02796	332 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	GIP3	Q03016	1276 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	RGT2	Q12300	763 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	RPO41	P13433	1351 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	RNA1	P11745	407 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	RPB5	P20434	215 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	RAD57	P25301	460 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	ARO2	P28777	376 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	SKT5	P34226	696 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	PFF1	P38244	976 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	PEX32	P38292	413 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	INM1	P38710	295 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	LIN1	P38852	340 aa	Predicted RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	MET30	P39014	640 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	RPH1	P39956	796 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YIL169C	P40442	995 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YIR016W	P40572	265 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	LCB2	P40970	561 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SPG5	P42933	373 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	GAT1	P43574	510 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SFH5	P47008	294 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SHE4	P51534	789 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YGL242C	P53066	181 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	DIS3	Q08162	1001 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	CUE5	Q08412	411 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	VPS54	Q12071	889 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	PSY3	Q12318	242 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	RPL42A	P0CX27	106 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	RPL42B	P0CX28	106 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	FRE2	P36033	711 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	VPS52	P39904	641 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SHO1	P40073	367 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	RPR2	P40571	144 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YNL143C	P53908	130 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YDR387C	Q04162	555 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	MSC3	Q05812	728 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	HNT3	Q08702	217 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	AYT1	Q12226	474 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SSK22	P25390	1331 aa	Predicted RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	MES1	P00958	751 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	ILV5	P06168	395 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	YAR066W	P0CX18	203 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YHR214W	P0CX19	203 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	TAL1	P15019	335 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	GRR1	P24814	1151 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	PET18	P25362	215 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	YCR022C	P25620	114 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	ITR1	P30605	584 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	APE2	P32454	952 aa	Known RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	SDH3	P33421	198 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	SRB2	P34162	210 aa		1.37	□□□□□ -2.19
SMC4	YLR086W	LAS1	P36146	502 aa	Predicted RBP	1.37	□□□□□ -2.19
SMC4	YLR086W	SCO2	P38072	301 aa		1.37	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 7 ms