RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C HSP104P31539 908 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C CYS4P32582 507 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C KKQ8P36004 724 aa1.98□□□□□ -2.09
VPS35YJL154C GDT1P38301 280 aaPredicted RBP1.98□□□□□ -2.09
VPS35YJL154C DHH1P39517 506 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C PHO86P46956 311 aa1.98□□□□□ -2.09
VPS35YJL154C GPI8P49018 411 aa1.98□□□□□ -2.09
VPS35YJL154C EOS1P53938 366 aa1.98□□□□□ -2.09
VPS35YJL154C PRP3Q03338 469 aaPredicted RBP1.98□□□□□ -2.09
VPS35YJL154C SMA2Q04658 369 aa1.98□□□□□ -2.09
VPS35YJL154C HCR1Q05775 265 aaKnown RBP1.98□□□□□ -2.09
VPS35YJL154C NDD1Q08887 554 aa1.98□□□□□ -2.09
VPS35YJL154C RUP1Q12242 671 aa1.98□□□□□ -2.09
VPS35YJL154C HEM2P05373 342 aa1.97□□□□□ -2.09
VPS35YJL154C SPS22P25380 463 aa1.97□□□□□ -2.09
VPS35YJL154C AGA1P32323 725 aa1.97□□□□□ -2.09
VPS35YJL154C KAP104P38217 918 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C MTC6P38849 526 aa1.97□□□□□ -2.09
VPS35YJL154C YER079WP40052 210 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C SER3P40054 469 aa1.97□□□□□ -2.09
VPS35YJL154C MEP2P41948 499 aa1.97□□□□□ -2.09
VPS35YJL154C EPL1P43572 832 aa1.97□□□□□ -2.09
VPS35YJL154C NCA3P46955 337 aa1.97□□□□□ -2.09
VPS35YJL154C PPM1Q04081 328 aa1.97□□□□□ -2.09
VPS35YJL154C MDM30Q05930 598 aa1.97□□□□□ -2.09
VPS35YJL154C YLR456WQ06199 204 aa1.97□□□□□ -2.09
VPS35YJL154C RRD2Q12461 358 aa1.97□□□□□ -2.09
VPS35YJL154C PDR11P40550 1411 aa1.97□□□□□ -2.09
VPS35YJL154C SEC63P14906 663 aa1.97□□□□□ -2.09
VPS35YJL154C SLY1P22213 666 aa1.97□□□□□ -2.09
VPS35YJL154C SLM5P25345 492 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C PHO91P27514 894 aa1.97□□□□□ -2.09
VPS35YJL154C MMF1P40185 145 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C YDL186WP48568 277 aa1.97□□□□□ -2.09
VPS35YJL154C YNR048WP53740 393 aa1.97□□□□□ -2.09
VPS35YJL154C RHO5P53879 331 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C MMT1Q03218 510 aa1.97□□□□□ -2.09
VPS35YJL154C RRP9Q06506 573 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C NDE2Q07500 545 aa1.97□□□□□ -2.09
VPS35YJL154C SNX3Q08826 162 aaKnown RBP1.97□□□□□ -2.09
VPS35YJL154C YLR108CQ12259 485 aa1.97□□□□□ -2.09
VPS35YJL154C RSF2P46974 1380 aa1.97□□□□□ -2.09
VPS35YJL154C SNT1P25357 1226 aa1.96□□□□□ -2.1
VPS35YJL154C ATS1P31386 333 aa1.96□□□□□ -2.1
VPS35YJL154C VPH1P32563 840 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C MUD1P32605 298 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C COX13P32799 129 aa1.96□□□□□ -2.1
VPS35YJL154C MST28P39552 234 aa1.96□□□□□ -2.1
VPS35YJL154C GPI15P53961 229 aa1.96□□□□□ -2.1
VPS35YJL154C ORT1Q12375 292 aa1.96□□□□□ -2.1
VPS35YJL154C RRP12Q12754 1228 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C SRB8P25648 1427 aa1.96□□□□□ -2.1
VPS35YJL154C SEC7P11075 2009 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C ADE4P04046 510 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C PRP16P15938 1071 aaPredicted RBP1.96□□□□□ -2.1
VPS35YJL154C ANP1P32629 500 aa1.96□□□□□ -2.1
VPS35YJL154C ASC1P38011 319 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C RFC3P38629 340 aa1.96□□□□□ -2.1
VPS35YJL154C APE4P38821 490 aa1.96□□□□□ -2.1
VPS35YJL154C YHR218WP38899 603 aa1.96□□□□□ -2.1
VPS35YJL154C OST1P41543 476 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C GCD10P41814 478 aa1.96□□□□□ -2.1
VPS35YJL154C ROG1P53118 685 aa1.96□□□□□ -2.1
VPS35YJL154C STD1Q02794 444 aa1.96□□□□□ -2.1
VPS35YJL154C RRN11Q04712 507 aa1.96□□□□□ -2.1
VPS35YJL154C SKI7Q08491 747 aaPredicted RBP1.96□□□□□ -2.1
VPS35YJL154C UAF30Q08747 228 aa1.96□□□□□ -2.1
VPS35YJL154C THP3Q12049 470 aaKnown RBP1.96□□□□□ -2.1
VPS35YJL154C ATG34Q12292 412 aa1.96□□□□□ -2.1
VPS35YJL154C RAD51P25454 400 aa1.95□□□□□ -2.1
VPS35YJL154C KRR1P25586 316 aaPredicted RBP1.95□□□□□ -2.1
VPS35YJL154C MSP1P28737 362 aa1.95□□□□□ -2.1
VPS35YJL154C PUP2P32379 260 aa1.95□□□□□ -2.1
VPS35YJL154C YAL037WP39728 267 aa1.95□□□□□ -2.1
VPS35YJL154C GAT2P40209 560 aa1.95□□□□□ -2.1
VPS35YJL154C YDR541CQ03049 344 aa1.95□□□□□ -2.1
VPS35YJL154C ESA1Q08649 445 aa1.95□□□□□ -2.1
VPS35YJL154C CEX1Q12453 761 aa1.95□□□□□ -2.1
VPS35YJL154C TAO3P40468 2376 aa1.95□□□□□ -2.1
VPS35YJL154C HHF1P02309 103 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C RPL1AP0CX43 217 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C RPL1BP0CX44 217 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C TPM1P17536 199 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C CTR86P25355 563 aa1.95□□□□□ -2.1
VPS35YJL154C NRP1P32770 719 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
VPS35YJL154C YBL028CP38202 106 aa1.95□□□□□ -2.1
VPS35YJL154C PFF1P38244 976 aa1.95□□□□□ -2.1
VPS35YJL154C INM1P38710 295 aa1.95□□□□□ -2.1
VPS35YJL154C NDT80P38830 627 aa1.95□□□□□ -2.1
VPS35YJL154C MNL1P38888 796 aa1.95□□□□□ -2.1
VPS35YJL154C SEC9P40357 651 aa1.95□□□□□ -2.1
VPS35YJL154C TOM22P49334 152 aa1.95□□□□□ -2.1
VPS35YJL154C AZR1P50080 613 aa1.95□□□□□ -2.1
VPS35YJL154C MSO1P53604 210 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C TIM11P81449 96 aaPredicted RBP1.95□□□□□ -2.1
VPS35YJL154C PRP42Q03776 544 aaKnown RBP1.95□□□□□ -2.1
VPS35YJL154C YBR298C-AQ8TGK4 73 aa1.95□□□□□ -2.1
VPS35YJL154C RAD61Q99359 647 aa1.95□□□□□ -2.1
VPS35YJL154C IMA3P0CW40 589 aa1.95□□□□□ -2.1
VPS35YJL154C IMA4P0CW41 589 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms