RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	SNT309	Q06091	175 aa	Predicted RBP	3.2	□□□□□ -1.9
LSM4	YER112W	NSE1	Q07913	336 aa		3.2	□□□□□ -1.9
LSM4	YER112W	YRM1	Q12340	786 aa		3.2	□□□□□ -1.9
LSM4	YER112W	HRT3	Q12347	344 aa		3.2	□□□□□ -1.9
LSM4	YER112W	NCA2	Q12374	616 aa		3.2	□□□□□ -1.9
LSM4	YER112W	RPS8A	P0CX39	200 aa	Known RBP	3.19	□□□□□ -1.9
LSM4	YER112W	RPS8B	P0CX40	200 aa	Known RBP	3.19	□□□□□ -1.9
LSM4	YER112W	CLN3	P13365	580 aa		3.19	□□□□□ -1.9
LSM4	YER112W	LDB16	P25587	256 aa		3.19	□□□□□ -1.9
LSM4	YER112W	PHO91	P27514	894 aa		3.19	□□□□□ -1.9
LSM4	YER112W	TOS3	P43637	560 aa		3.19	□□□□□ -1.9
LSM4	YER112W	NUP116	Q02630	1113 aa		3.19	□□□□□ -1.9
LSM4	YER112W	YDR541C	Q03049	344 aa		3.19	□□□□□ -1.9
LSM4	YER112W	MDM36	Q06820	579 aa		3.19	□□□□□ -1.9
LSM4	YER112W	FDH1	Q08911	376 aa		3.19	□□□□□ -1.9
LSM4	YER112W	RPN5	Q12250	445 aa	Known RBP	3.19	□□□□□ -1.9
LSM4	YER112W	ATP1	P07251	545 aa	Known RBP	3.18	□□□□□ -1.9
LSM4	YER112W	ALG1	P16661	449 aa		3.18	□□□□□ -1.9
LSM4	YER112W	GDI1	P39958	451 aa	Known RBP	3.18	□□□□□ -1.9
LSM4	YER112W	PRE5	P40302	234 aa	Known RBP	3.18	□□□□□ -1.9
LSM4	YER112W	PAC11	P40960	533 aa		3.18	□□□□□ -1.9
LSM4	YER112W	PRP3	Q03338	469 aa	Predicted RBP	3.18	□□□□□ -1.9
LSM4	YER112W	YMR027W	Q04371	470 aa		3.18	□□□□□ -1.9
LSM4	YER112W	LOT6	Q07923	191 aa		3.18	□□□□□ -1.9
LSM4	YER112W	PAR32	Q12515	295 aa	Known RBP	3.18	□□□□□ -1.9
LSM4	YER112W	MNE1	P24720	663 aa		3.17	□□□□□ -1.9
LSM4	YER112W	SLM5	P25345	492 aa	Known RBP	3.17	□□□□□ -1.9
LSM4	YER112W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
LSM4	YER112W	MDL1	P33310	695 aa		3.17	□□□□□ -1.9
LSM4	YER112W	SKN1	P33336	771 aa		3.17	□□□□□ -1.9
LSM4	YER112W	SKT5	P34226	696 aa		3.17	□□□□□ -1.9
LSM4	YER112W	SWD3	P38123	315 aa		3.17	□□□□□ -1.9
LSM4	YER112W	GPI16	P38875	610 aa		3.17	□□□□□ -1.9
LSM4	YER112W	MAM33	P40513	266 aa		3.17	□□□□□ -1.9
LSM4	YER112W	ROG1	P53118	685 aa		3.17	□□□□□ -1.9
LSM4	YER112W	YGL039W	P53183	348 aa	Known RBP	3.17	□□□□□ -1.9
LSM4	YER112W	RRP46	P53256	223 aa	Predicted RBP	3.17	□□□□□ -1.9
LSM4	YER112W	NDL1	Q06568	189 aa		3.17	□□□□□ -1.9
LSM4	YER112W	JID1	Q12350	301 aa		3.17	□□□□□ -1.9
LSM4	YER112W	ADH2	P00331	348 aa	Known RBP	3.16	□□□□□ -1.9
LSM4	YER112W	RPL1A	P0CX43	217 aa	Known RBP	3.16	□□□□□ -1.9
LSM4	YER112W	RPL1B	P0CX44	217 aa	Known RBP	3.16	□□□□□ -1.9
LSM4	YER112W	PHA2	P32452	334 aa		3.16	□□□□□ -1.9
LSM4	YER112W	YEF1	P32622	495 aa		3.16	□□□□□ -1.9
LSM4	YER112W	MRPL4	P36517	319 aa		3.16	□□□□□ -1.9
LSM4	YER112W	SLX1	P38324	304 aa		3.16	□□□□□ -1.9
LSM4	YER112W	SBE22	P38814	852 aa		3.16	□□□□□ -1.9
LSM4	YER112W	JEM1	P40358	645 aa		3.16	□□□□□ -1.9
LSM4	YER112W	SIM1	P40472	476 aa		3.16	□□□□□ -1.9
LSM4	YER112W	CHS6	P40955	746 aa		3.16	□□□□□ -1.9
LSM4	YER112W	MRM2	P53123	320 aa		3.16	□□□□□ -1.9
LSM4	YER112W	PRM6	Q04705	352 aa		3.16	□□□□□ -1.9
LSM4	YER112W	RBD2	Q12270	262 aa		3.16	□□□□□ -1.9
LSM4	YER112W	WTM1	Q12363	437 aa	Known RBP	3.16	□□□□□ -1.9
LSM4	YER112W	POM152	P39685	1337 aa		3.16	□□□□□ -1.9
LSM4	YER112W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	RIP-Chip
LSM4	YER112W	CAP2	P13517	287 aa		3.15	□□□□□ -1.91
LSM4	YER112W	EXG1	P23776	448 aa	Known RBP	3.15	□□□□□ -1.91
LSM4	YER112W	QDR3	P38227	689 aa		3.15	□□□□□ -1.91
LSM4	YER112W	STP2	P38704	541 aa		3.15	□□□□□ -1.91
LSM4	YER112W	EFM4	P40516	257 aa		3.15	□□□□□ -1.91
LSM4	YER112W	SHY1	P53266	389 aa		3.15	□□□□□ -1.91
LSM4	YER112W	YGR117C	P53270	476 aa		3.15	□□□□□ -1.91
LSM4	YER112W	SMC5	Q08204	1093 aa		3.15	□□□□□ -1.91
LSM4	YER112W	YGK3	Q12222	375 aa	Predicted RBP	3.15	□□□□□ -1.91
LSM4	YER112W	EAF3	Q12432	401 aa		3.15	□□□□□ -1.91
LSM4	YER112W	PIS1	P06197	220 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	ARF1	P11076	181 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	RPB5	P20434	215 aa		3.14	□□□□□ -1.91
LSM4	YER112W	PRR1	P28708	518 aa		3.14	□□□□□ -1.91
LSM4	YER112W	SPR1	P32603	445 aa		3.14	□□□□□ -1.91
LSM4	YER112W	DOA1	P36037	715 aa		3.14	□□□□□ -1.91
LSM4	YER112W	KAP104	P38217	918 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	GDT1	P38301	280 aa	Predicted RBP	3.14	□□□□□ -1.91
LSM4	YER112W	ATM1	P40416	690 aa		3.14	□□□□□ -1.91
LSM4	YER112W	SEC28	P40509	296 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	STE24	P47154	453 aa		3.14	□□□□□ -1.91
LSM4	YER112W	SPR6	Q01684	191 aa		3.14	□□□□□ -1.91
LSM4	YER112W	ADA2	Q02336	434 aa		3.14	□□□□□ -1.91
LSM4	YER112W	YMR102C	Q03177	834 aa		3.14	□□□□□ -1.91
LSM4	YER112W	RCF1	Q03713	159 aa		3.14	□□□□□ -1.91
LSM4	YER112W	RTN1	Q04947	295 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	RIF2	Q06208	395 aa		3.14	□□□□□ -1.91
LSM4	YER112W	MHR1	Q06630	226 aa		3.14	□□□□□ -1.91
LSM4	YER112W	CMS1	Q07897	291 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	AAD15	Q08361	143 aa		3.14	□□□□□ -1.91
LSM4	YER112W	CUE5	Q08412	411 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	IZH2	Q12442	317 aa		3.14	□□□□□ -1.91
LSM4	YER112W	HTZ1	Q12692	134 aa	Known RBP	3.14	□□□□□ -1.91
LSM4	YER112W	SRN2	Q99176	213 aa		3.14	□□□□□ -1.91
LSM4	YER112W	HSP82	P02829	709 aa	Known RBP	3.13	□□□□□ -1.91
LSM4	YER112W	MSI1	P13712	422 aa		3.13	□□□□□ -1.91
LSM4	YER112W	PUP2	P32379	260 aa		3.13	□□□□□ -1.91
LSM4	YER112W	CSE2	P33308	149 aa		3.13	□□□□□ -1.91
LSM4	YER112W	MRPL10	P36520	322 aa		3.13	□□□□□ -1.91
LSM4	YER112W	AIM10	P39965	576 aa	Known RBP	3.13	□□□□□ -1.91
LSM4	YER112W	HAC1	P41546	238 aa		3.13	□□□□□ -1.91
LSM4	YER112W	YFR057W	P43625	151 aa		3.13	□□□□□ -1.91
LSM4	YER112W	LCB3	P47013	409 aa		3.13	□□□□□ -1.91
LSM4	YER112W	AIM24	P47127	394 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms