RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C IGO1P53897 168 aa9.83□□□□□ -0.84
SHM2YLR058C REC102Q02721 264 aa9.83□□□□□ -0.84
SHM2YLR058C HOT1Q03213 719 aa9.83□□□□□ -0.84
SHM2YLR058C MDM12Q92328 271 aa9.83□□□□□ -0.84
SHM2YLR058C GAL4P04386 881 aa9.82□□□□□ -0.84
SHM2YLR058C MER1P16523 270 aa9.82□□□□□ -0.84
SHM2YLR058C ARE1P25628 610 aa9.82□□□□□ -0.84
SHM2YLR058C RIB1P38066 345 aa9.82□□□□□ -0.84
SHM2YLR058C TSL1P38427 1098 aaKnown RBP9.82□□□□□ -0.84
SHM2YLR058C STE24P47154 453 aa9.82□□□□□ -0.84
SHM2YLR058C YJR142WP47173 342 aa9.82□□□□□ -0.84
SHM2YLR058C TOM22P49334 152 aa9.82□□□□□ -0.84
SHM2YLR058C RMR1P53060 241 aa9.82□□□□□ -0.84
SHM2YLR058C CDH1P53197 566 aa9.82□□□□□ -0.84
SHM2YLR058C SIZ1Q04195 904 aa9.82□□□□□ -0.84
SHM2YLR058C MEU1Q07938 337 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
SHM2YLR058C ATG14P38270 344 aa9.82□□□□□ -0.84
SHM2YLR058C OCA5P38738 679 aa9.82□□□□□ -0.84
SHM2YLR058C FAA3P39002 694 aa9.82□□□□□ -0.84
SHM2YLR058C PRP39P39682 629 aaKnown RBP9.82□□□□□ -0.84
SHM2YLR058C SWD1P39706 426 aa9.82□□□□□ -0.84
SHM2YLR058C YIL086CP40503 102 aa9.82□□□□□ -0.84
SHM2YLR058C VHR1P40522 640 aa9.82□□□□□ -0.84
SHM2YLR058C MRK1P50873 501 aa9.82□□□□□ -0.84
SHM2YLR058C ATF2P53296 535 aa9.82□□□□□ -0.84
SHM2YLR058C YMR310CQ04867 317 aaPredicted RBP9.82□□□□□ -0.84
SHM2YLR058C YDL199CQ12407 687 aa9.82□□□□□ -0.84
SHM2YLR058C HTS1P07263 546 aaKnown RBP9.81□□□□□ -0.84
SHM2YLR058C PUT2P07275 575 aa9.81□□□□□ -0.84
SHM2YLR058C DMC1P25453 334 aa9.81□□□□□ -0.84
SHM2YLR058C NTG1P31378 399 aa9.81□□□□□ -0.84
SHM2YLR058C MKK1P32490 508 aa9.81□□□□□ -0.84
SHM2YLR058C LHP1P33399 275 aaKnown RBP9.81□□□□□ -0.84
SHM2YLR058C TAF14P35189 244 aa9.81□□□□□ -0.84
SHM2YLR058C YHL012WP38709 493 aa9.81□□□□□ -0.84
SHM2YLR058C MRPS18P42847 217 aa9.81□□□□□ -0.84
SHM2YLR058C AGP3P43548 558 aa9.81□□□□□ -0.84
SHM2YLR058C ATG38Q05789 226 aaKnown RBP9.81□□□□□ -0.84
SHM2YLR058C SKS1Q12505 502 aa9.81□□□□□ -0.84
SHM2YLR058C TIM9O74700 87 aa9.8□□□□□ -0.84
SHM2YLR058C STE6P12866 1290 aa9.8□□□□□ -0.84
SHM2YLR058C SNF4P12904 322 aa9.8□□□□□ -0.84
SHM2YLR058C RPS1BP23248 255 aaKnown RBP9.8□□□□□ -0.84
SHM2YLR058C CLB3P24870 427 aa9.8□□□□□ -0.84
SHM2YLR058C MRPL32P25348 183 aa9.8□□□□□ -0.84
SHM2YLR058C CDC3P32457 520 aaKnown RBP9.8□□□□□ -0.84
SHM2YLR058C MRPL15P36523 253 aa9.8□□□□□ -0.84
SHM2YLR058C SLM4P38247 162 aa9.8□□□□□ -0.84
SHM2YLR058C YJL068CP40363 299 aa9.8□□□□□ -0.84
SHM2YLR058C MPM1P40364 252 aa9.8□□□□□ -0.84
SHM2YLR058C SPG5P42933 373 aa9.8□□□□□ -0.84
SHM2YLR058C UBC9P50623 157 aaPredicted RBP9.8□□□□□ -0.84
SHM2YLR058C HOS2P53096 452 aaPredicted RBP9.8□□□□□ -0.84
SHM2YLR058C YGR079WP53249 370 aa9.8□□□□□ -0.84
SHM2YLR058C ERG13P54839 491 aaKnown RBP9.8□□□□□ -0.84
SHM2YLR058C YAT1P80235 687 aa9.8□□□□□ -0.84
SHM2YLR058C RRT8Q08219 342 aa9.8□□□□□ -0.84
SHM2YLR058C YTM1Q12024 460 aaPredicted RBP9.8□□□□□ -0.84
SHM2YLR058C BSC1Q12140 328 aa9.8□□□□□ -0.84
SHM2YLR058C YOR342CQ12182 319 aa9.8□□□□□ -0.84
SHM2YLR058C TAF3Q12297 353 aa9.8□□□□□ -0.84
SHM2YLR058C YOL159C-AQ3E769 90 aa9.8□□□□□ -0.84
SHM2YLR058C YKL033W-AQ86ZR7 236 aa9.8□□□□□ -0.84
SHM2YLR058C YOR019WQ99248 730 aa9.8□□□□□ -0.84
SHM2YLR058C ZWF1P11412 505 aaKnown RBP9.79□□□□□ -0.84
SHM2YLR058C URA4P20051 364 aa9.79□□□□□ -0.84
SHM2YLR058C YJU2P28320 278 aaPredicted RBP9.79□□□□□ -0.84
SHM2YLR058C AUR1P36107 401 aaPredicted RBP9.79□□□□□ -0.84
SHM2YLR058C ZTA1P38230 334 aaKnown RBP9.79□□□□□ -0.84
SHM2YLR058C ELP2P42935 788 aa9.79□□□□□ -0.84
SHM2YLR058C TRM9P49957 279 aa9.79□□□□□ -0.84
SHM2YLR058C YGR012WP53206 393 aa9.79□□□□□ -0.84
SHM2YLR058C SPO77Q06134 477 aa9.79□□□□□ -0.84
SHM2YLR058C MCA1Q08601 432 aa9.79□□□□□ -0.84
SHM2YLR058C GUP2Q08929 609 aa9.79□□□□□ -0.84
SHM2YLR058C BRR2P32639 2163 aaKnown RBP9.78□□□□□ -0.84
SHM2YLR058C MF(ALPHA)1P01149 165 aa9.78□□□□□ -0.84
SHM2YLR058C SUI3P09064 285 aaKnown RBP9.78□□□□□ -0.84
SHM2YLR058C RPL40AP0CH08 128 aaKnown RBP9.78□□□□□ -0.84
SHM2YLR058C RPL40BP0CH09 128 aaKnown RBP9.78□□□□□ -0.84
SHM2YLR058C RPB5P20434 215 aa9.78□□□□□ -0.84
SHM2YLR058C MXR2P25566 168 aa9.78□□□□□ -0.84
SHM2YLR058C YIM1P28625 365 aa9.78□□□□□ -0.84
SHM2YLR058C SWH1P35845 1188 aa9.78□□□□□ -0.84
SHM2YLR058C RPS27AP35997 82 aaKnown RBP9.78□□□□□ -0.84
SHM2YLR058C SPC34P36131 295 aa9.78□□□□□ -0.84
SHM2YLR058C RPS27BP38711 82 aa9.78□□□□□ -0.84
SHM2YLR058C UME6P39001 836 aa9.78□□□□□ -0.84
SHM2YLR058C FMP52P40008 231 aa9.78□□□□□ -0.84
SHM2YLR058C YIL152WP40455 235 aa9.78□□□□□ -0.84
SHM2YLR058C SNL1P40548 159 aa9.78□□□□□ -0.84
SHM2YLR058C YNL181WP53878 407 aa9.78□□□□□ -0.84
SHM2YLR058C DAL82P21705 255 aa9.77□□□□□ -0.85
SHM2YLR058C BUD14P27637 709 aa9.77□□□□□ -0.85
SHM2YLR058C PTR2P32901 601 aa9.77□□□□□ -0.85
SHM2YLR058C MSN2P33748 704 aa9.77□□□□□ -0.85
SHM2YLR058C TUL1P36096 758 aa9.77□□□□□ -0.85
SHM2YLR058C TIM54P47045 478 aa9.77□□□□□ -0.85
SHM2YLR058C YGR266WP53326 701 aa9.77□□□□□ -0.85
SHM2YLR058C YDR239CQ03780 787 aa9.77□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms