RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W UGO1Q03327 502 aa3.64□□□□□ -1.83
SSL1YLR005W URH1Q04179 340 aa3.64□□□□□ -1.83
SSL1YLR005W YMR027WQ04371 470 aa3.64□□□□□ -1.83
SSL1YLR005W SML1Q04964 104 aa3.64□□□□□ -1.83
SSL1YLR005W RGC1Q06108 1083 aaKnown RBP3.64□□□□□ -1.83
SSL1YLR005W YLR177WQ06251 628 aa3.64□□□□□ -1.83
SSL1YLR005W YPR011CQ12251 326 aa3.64□□□□□ -1.83
SSL1YLR005W HEM2P05373 342 aa3.63□□□□□ -1.83
SSL1YLR005W RAD1P06777 1100 aa3.63□□□□□ -1.83
SSL1YLR005W PHO2P07269 559 aa3.63□□□□□ -1.83
SSL1YLR005W YMC1P32331 307 aa3.63□□□□□ -1.83
SSL1YLR005W CDC5P32562 705 aa3.63□□□□□ -1.83
SSL1YLR005W GCG1P32656 232 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W RPS27AP35997 82 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W RPS27BP38711 82 aa3.63□□□□□ -1.83
SSL1YLR005W REV7P38927 245 aa3.63□□□□□ -1.83
SSL1YLR005W CCT4P39078 528 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W YIL152WP40455 235 aa3.63□□□□□ -1.83
SSL1YLR005W NDC80P40460 691 aa3.63□□□□□ -1.83
SSL1YLR005W MAD2P40958 196 aa3.63□□□□□ -1.83
SSL1YLR005W NMD5P46970 1048 aa3.63□□□□□ -1.83
SSL1YLR005W SDT1P53078 280 aa3.63□□□□□ -1.83
SSL1YLR005W BUD32P53323 261 aa3.63□□□□□ -1.83
SSL1YLR005W YNL058CP53947 316 aa3.63□□□□□ -1.83
SSL1YLR005W GOT1Q03554 138 aa3.63□□□□□ -1.83
SSL1YLR005W YMR210WQ03649 449 aa3.63□□□□□ -1.83
SSL1YLR005W HPT1Q04178 221 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W VTI1Q04338 217 aa3.63□□□□□ -1.83
SSL1YLR005W BOP2Q06150 570 aa3.63□□□□□ -1.83
SSL1YLR005W YPS7Q06325 596 aa3.63□□□□□ -1.83
SSL1YLR005W VAM6Q07468 1049 aa3.63□□□□□ -1.83
SSL1YLR005W YEH1Q07804 573 aa3.63□□□□□ -1.83
SSL1YLR005W YOL159CQ08300 171 aa3.63□□□□□ -1.83
SSL1YLR005W RUD3Q12234 484 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W RGT2Q12300 763 aa3.63□□□□□ -1.83
SSL1YLR005W CMD1P06787 147 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W SSA3P09435 649 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W RPS21AP0C0V8 87 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W GCY1P14065 312 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SSL1YLR005W YCL042WP25572 119 aa3.63□□□□□ -1.83
SSL1YLR005W ATG15P25641 520 aa3.63□□□□□ -1.83
SSL1YLR005W HXT4P32467 576 aa3.63□□□□□ -1.83
SSL1YLR005W ERG1P32476 496 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W PET127P32606 800 aa3.63□□□□□ -1.83
SSL1YLR005W YEL043WP32618 956 aa3.63□□□□□ -1.83
SSL1YLR005W SUI1P32911 108 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W RMA1P36001 430 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W APT2P36973 181 aa3.63□□□□□ -1.83
SSL1YLR005W YBR062CP38239 180 aa3.63□□□□□ -1.83
SSL1YLR005W HXT6P39003 570 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W HXT7P39004 570 aa3.63□□□□□ -1.83
SSL1YLR005W MET30P39014 640 aa3.63□□□□□ -1.83
SSL1YLR005W CCT2P39076 527 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W YJL206CP39529 758 aa3.63□□□□□ -1.83
SSL1YLR005W VPS52P39904 641 aa3.63□□□□□ -1.83
SSL1YLR005W BNA3P47039 444 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W BSC5P53755 489 aa3.63□□□□□ -1.83
SSL1YLR005W KTR5P53966 522 aaPredicted RBP3.63□□□□□ -1.83
SSL1YLR005W SMX3P54999 86 aaPredicted RBP3.63□□□□□ -1.83
SSL1YLR005W GIP3Q03016 1276 aa3.63□□□□□ -1.83
SSL1YLR005W ADE13Q05911 482 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W YOR376WQ08900 122 aa3.63□□□□□ -1.83
SSL1YLR005W MMT2Q08970 484 aa3.63□□□□□ -1.83
SSL1YLR005W MDY2Q12285 212 aa3.63□□□□□ -1.83
SSL1YLR005W AHA1Q12449 350 aaKnown RBP3.63□□□□□ -1.83
SSL1YLR005W YOR032W-AQ8TGS1 66 aa3.63□□□□□ -1.83
SSL1YLR005W MDM12Q92328 271 aa3.63□□□□□ -1.83
SSL1YLR005W COR1P07256 457 aa3.62□□□□□ -1.83
SSL1YLR005W PET123P17558 318 aa3.62□□□□□ -1.83
SSL1YLR005W CHA1P25379 360 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W PAP1P29468 568 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W COX13P32799 129 aa3.62□□□□□ -1.83
SSL1YLR005W CBF5P33322 483 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SSL1YLR005W BYE1P36106 594 aa3.62□□□□□ -1.83
SSL1YLR005W FLO10P36170 1169 aa3.62□□□□□ -1.83
SSL1YLR005W OLA1P38219 394 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W IFA38P38286 347 aa3.62□□□□□ -1.83
SSL1YLR005W HRB1P38922 454 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SSL1YLR005W SSP120P39931 234 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W ICE2P40499 491 aa3.62□□□□□ -1.83
SSL1YLR005W CAB2P40506 365 aa3.62□□□□□ -1.83
SSL1YLR005W INA22P40576 216 aa3.62□□□□□ -1.83
SSL1YLR005W PHB1P40961 287 aa3.62□□□□□ -1.83
SSL1YLR005W CCT7P42943 550 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W STB2P46679 850 aa3.62□□□□□ -1.83
SSL1YLR005W BNA2P47125 453 aa3.62□□□□□ -1.83
SSL1YLR005W YJR120WP47157 116 aa3.62□□□□□ -1.83
SSL1YLR005W TIS11P47977 285 aa3.62□□□□□ -1.83
SSL1YLR005W MPS1P54199 764 aa3.62□□□□□ -1.83
SSL1YLR005W ARG5,6Q01217 863 aa3.62□□□□□ -1.83
SSL1YLR005W SHR3Q02774 210 aa3.62□□□□□ -1.83
SSL1YLR005W YDR209CQ03480 137 aa3.62□□□□□ -1.83
SSL1YLR005W TAF11Q04226 346 aa3.62□□□□□ -1.83
SSL1YLR005W RRP40Q08285 240 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W UBX3Q12229 455 aa3.62□□□□□ -1.83
SSL1YLR005W COX17Q12287 69 aa3.62□□□□□ -1.83
SSL1YLR005W PAR32Q12515 295 aaKnown RBP3.62□□□□□ -1.83
SSL1YLR005W YKL033W-AQ86ZR7 236 aa3.62□□□□□ -1.83
SSL1YLR005W SEC16P48415 2195 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W TY2A-LR1P0C2J4 438 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms