RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W SLM4P38247 162 aa2.56□□□□□ -2
UBP16YPL072W REE1P40893 198 aa2.56□□□□□ -2
UBP16YPL072W RRT5P43607 289 aa2.56□□□□□ -2
UBP16YPL072W COS5P47187 383 aa2.56□□□□□ -2
UBP16YPL072W AVT4P50944 713 aa2.56□□□□□ -2
UBP16YPL072W YGL108CP53139 140 aa2.56□□□□□ -2
UBP16YPL072W MEH1Q02205 184 aa2.56□□□□□ -2
UBP16YPL072W YMR130WQ04223 302 aa2.56□□□□□ -2
UBP16YPL072W RPC11Q04307 110 aaPredicted RBP2.56□□□□□ -2
UBP16YPL072W COS7Q07788 383 aa2.56□□□□□ -2
UBP16YPL072W SIL1Q08199 421 aa2.56□□□□□ -2
UBP16YPL072W RRG7Q08774 242 aaPredicted RBP2.56□□□□□ -2
UBP16YPL072W AEP3Q12089 606 aa2.56□□□□□ -2
UBP16YPL072W RPL6BP05739 176 aaKnown RBP2.55□□□□□ -2
UBP16YPL072W URA4P20051 364 aa2.55□□□□□ -2
UBP16YPL072W KRR1P25586 316 aaPredicted RBP2.55□□□□□ -2
UBP16YPL072W CRM1P30822 1084 aaKnown RBP2.55□□□□□ -2
UBP16YPL072W RSM22P36056 628 aa2.55□□□□□ -2
UBP16YPL072W GDT1P38301 280 aaPredicted RBP2.55□□□□□ -2
UBP16YPL072W WSS1P38838 269 aa2.55□□□□□ -2
UBP16YPL072W MBB1P39534 108 aa2.55□□□□□ -2
UBP16YPL072W POP1P41812 875 aa2.55□□□□□ -2
UBP16YPL072W OCA1P50946 238 aaPredicted RBP2.55□□□□□ -2
UBP16YPL072W RPL6AQ02326 176 aaKnown RBP2.55□□□□□ -2
UBP16YPL072W HRT3Q12347 344 aa2.55□□□□□ -2
UBP16YPL072W ISN1Q99312 450 aa2.55□□□□□ -2
UBP16YPL072W YLR278CQ05854 1341 aa2.54□□□□□ -2
UBP16YPL072W STF1P01098 86 aa2.54□□□□□ -2
UBP16YPL072W GPH1P06738 902 aaKnown RBP2.54□□□□□ -2
UBP16YPL072W PDE2P06776 526 aa2.54□□□□□ -2
UBP16YPL072W SPO7P18410 259 aa2.54□□□□□ -2
UBP16YPL072W CPR4P25334 318 aa2.54□□□□□ -2
UBP16YPL072W GLC7P32598 312 aaKnown RBP2.54□□□□□ -2
UBP16YPL072W SDH3P33421 198 aa2.54□□□□□ -2
UBP16YPL072W PIM1P36775 1133 aa2.54□□□□□ -2
UBP16YPL072W NAT2P37293 288 aa2.54□□□□□ -2
UBP16YPL072W SWD3P38123 315 aa2.54□□□□□ -2
UBP16YPL072W VHC1P38329 1120 aa2.54□□□□□ -2
UBP16YPL072W POP2P39008 433 aa2.54□□□□□ -2
UBP16YPL072W EFM4P40516 257 aa2.54□□□□□ -2
UBP16YPL072W IBD2P53892 351 aa2.54□□□□□ -2
UBP16YPL072W YLR152CP54072 576 aa2.54□□□□□ -2
UBP16YPL072W THP3Q12049 470 aaKnown RBP2.54□□□□□ -2
UBP16YPL072W RPN5Q12250 445 aaKnown RBP2.54□□□□□ -2
UBP16YPL072W FRE6Q12473 712 aa2.54□□□□□ -2
UBP16YPL072W CLN3P13365 580 aa2.53□□□□□ -2
UBP16YPL072W CLN1P20437 546 aa2.53□□□□□ -2
UBP16YPL072W TRX1P22217 103 aaKnown RBP2.53□□□□□ -2
UBP16YPL072W MSP1P28737 362 aa2.53□□□□□ -2
UBP16YPL072W ATP11P32453 318 aa2.53□□□□□ -2
UBP16YPL072W GYP6P32806 458 aa2.53□□□□□ -2
UBP16YPL072W ACL4Q03771 387 aa2.53□□□□□ -2
UBP16YPL072W YDR286CQ05530 114 aa2.53□□□□□ -2
UBP16YPL072W MRPL35Q06678 367 aa2.53□□□□□ -2
UBP16YPL072W PGC1Q08959 321 aa2.53□□□□□ -2
UBP16YPL072W VAM3Q12241 283 aa2.53□□□□□ -2
UBP16YPL072W VMA2P16140 517 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W TPM1P17536 199 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W PHO84P25297 587 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W RRP7P25368 297 aaPredicted RBP2.52□□□□□ -2.01
UBP16YPL072W SMI1P32566 505 aa2.52□□□□□ -2.01
UBP16YPL072W DAD2P36162 133 aa2.52□□□□□ -2.01
UBP16YPL072W TIS11P47977 285 aa2.52□□□□□ -2.01
UBP16YPL072W SLG1P54867 378 aa2.52□□□□□ -2.01
UBP16YPL072W YPL107WQ02873 248 aa2.52□□□□□ -2.01
UBP16YPL072W TAP42Q04372 366 aa2.52□□□□□ -2.01
UBP16YPL072W YDR341CQ05506 607 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W DCS1Q06151 350 aa2.52□□□□□ -2.01
UBP16YPL072W MMR1Q06324 491 aa2.52□□□□□ -2.01
UBP16YPL072W TSR1Q07381 788 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
UBP16YPL072W DIS3Q08162 1001 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W CUE5Q08412 411 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W NFI1Q12216 726 aa2.52□□□□□ -2.01
UBP16YPL072W YLR108CQ12259 485 aa2.52□□□□□ -2.01
UBP16YPL072W YDR061WQ12298 539 aa2.52□□□□□ -2.01
UBP16YPL072W SOD1P00445 154 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W BEM1P29366 551 aa2.52□□□□□ -2.01
UBP16YPL072W PRS1P32895 427 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W LAS1P36146 502 aaPredicted RBP2.52□□□□□ -2.01
UBP16YPL072W THI2P38141 450 aa2.52□□□□□ -2.01
UBP16YPL072W SYG1P40528 902 aa2.52□□□□□ -2.01
UBP16YPL072W RPS0BP46654 252 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W POP6P53218 158 aa2.52□□□□□ -2.01
UBP16YPL072W RPT4P53549 437 aaKnown RBP2.52□□□□□ -2.01
UBP16YPL072W TOF1P53840 1238 aa2.52□□□□□ -2.01
UBP16YPL072W DSL1P53847 754 aa2.52□□□□□ -2.01
UBP16YPL072W NCS2P53923 493 aaPredicted RBP2.52□□□□□ -2.01
UBP16YPL072W ODC1Q03028 310 aa2.52□□□□□ -2.01
UBP16YPL072W PPM1Q04081 328 aa2.52□□□□□ -2.01
UBP16YPL072W YLR456WQ06199 204 aa2.52□□□□□ -2.01
UBP16YPL072W SKS1Q12505 502 aa2.52□□□□□ -2.01
UBP16YPL072W MTR10Q99189 972 aa2.52□□□□□ -2.01
UBP16YPL072W ADH2P00331 348 aaKnown RBP2.51□□□□□ -2.01
UBP16YPL072W LEU4P06208 619 aaKnown RBP2.51□□□□□ -2.01
UBP16YPL072W RPL1AP0CX43 217 aaKnown RBP2.51□□□□□ -2.01
UBP16YPL072W RPL1BP0CX44 217 aaKnown RBP2.51□□□□□ -2.01
UBP16YPL072W YCR100CP25606 316 aa2.51□□□□□ -2.01
UBP16YPL072W HIR2P32480 875 aa2.51□□□□□ -2.01
UBP16YPL072W HEL1P36113 551 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms