RNA–Protein interactions for RNA: YDL160C

DHH1, Transcript of Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping, yeast

Gene DHH1, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHH1	YDL160C	AFT2	Q08957	416 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	BUG1	Q12191	341 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	ORT1	Q12375	292 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	YML002W	P0CF17	737 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	CTR86	P25355	563 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	MSP1	P28737	362 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	NIP1	P32497	812 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	ADH5	P38113	351 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	WSS1	P38838	269 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	LYS1	P38998	373 aa	RIP-Chip data	4.72	□□□□□ -1.65	not detected
DHH1	YDL160C	YFR016C	P43597	1233 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	PHB2	P50085	310 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	AVT4	P50944	713 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	FRE4	P53746	719 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	TOF1	P53840	1238 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	YPL068C	Q02749	293 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	RPN9	Q04062	393 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	YDR341C	Q05506	607 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	YPR022C	Q12139	1133 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	NDI1	P32340	513 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	GLC7	P32598	312 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	OLA1	P38219	394 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	MTC4	P38335	694 aa	Known RBP	4.72	□□□□□ -1.65
DHH1	YDL160C	GPI16	P38875	610 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	STN1	P38960	494 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	SAD1	P43589	448 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	TAF12	Q03761	539 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	REX4	Q08237	289 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	YLL056C	Q12177	298 aa		4.72	□□□□□ -1.65
DHH1	YDL160C	TCB3	Q03640	1545 aa	Known RBP	4.71	□□□□□ -1.66
DHH1	YDL160C	YAL037W	P39728	267 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	GAT2	P40209	560 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	YPS6	P40583	537 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	EPL1	P43572	832 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	RTT101	P47050	842 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	YIP5	P53108	310 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	MPS1	P54199	764 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	ODC1	Q03028	310 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	PRP3	Q03338	469 aa	Predicted RBP	4.71	□□□□□ -1.66
DHH1	YDL160C	HCR1	Q05775	265 aa	Known RBP	4.71	□□□□□ -1.66
DHH1	YDL160C	AYT1	Q12226	474 aa		4.71	□□□□□ -1.66
DHH1	YDL160C	MTF1	P14908	341 aa	Known RBP	4.7	□□□□□ -1.66
DHH1	YDL160C	ITR1	P30605	584 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	SPC110	P32380	944 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	DAD2	P36162	133 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	SIF2	P38262	535 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	PCF11	P39081	626 aa	Predicted RBP	4.7	□□□□□ -1.66
DHH1	YDL160C	RPR2	P40571	144 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	RRT5	P43607	289 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	ROG1	P53118	685 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	GPI15	P53961	229 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	DAP1	Q12091	152 aa		4.7	□□□□□ -1.66
DHH1	YDL160C	STF1	P01098	86 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	RPL6B	P05739	176 aa	Known RBP	4.69	□□□□□ -1.66
DHH1	YDL160C	RPL15A	P05748	204 aa	Known RBP	4.69	□□□□□ -1.66
DHH1	YDL160C	IMA3	P0CW40	589 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	IMA4	P0CW41	589 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	TRX1	P22217	103 aa	Known RBP	4.69	□□□□□ -1.66
DHH1	YDL160C	MRPL4	P36517	319 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	STP2	P38704	541 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	DHH1	P39517	506 aa	Known RBP	4.69	□□□□□ -1.66
DHH1	YDL160C	ALG8	P40351	577 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	POP6	P53218	158 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	CWC22	P53333	577 aa	Known RBP	4.69	□□□□□ -1.66
DHH1	YDL160C	RPL6A	Q02326	176 aa	Known RBP	4.69	□□□□□ -1.66
DHH1	YDL160C	PIR3	Q03180	325 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	VTI1	Q04338	217 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	NDL1	Q06568	189 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	IMA2	Q08295	589 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	YDR061W	Q12298	539 aa		4.69	□□□□□ -1.66
DHH1	YDL160C	CHS1	P08004	1131 aa		4.68	□□□□□ -1.66
DHH1	YDL160C	SAM1	P10659	382 aa	Known RBP	4.68	□□□□□ -1.66
DHH1	YDL160C	SAM2	P19358	384 aa	Known RBP	4.68	□□□□□ -1.66
DHH1	YDL160C	PHO91	P27514	894 aa		4.68	□□□□□ -1.66
DHH1	YDL160C	CYS4	P32582	507 aa	Known RBP	4.68	□□□□□ -1.66
DHH1	YDL160C	PMU1	P36069	295 aa		4.68	□□□□□ -1.66
DHH1	YDL160C	RLP24	Q07915	199 aa	Known RBP	4.68	□□□□□ -1.66
DHH1	YDL160C	RMD5	Q12508	421 aa		4.68	□□□□□ -1.66
DHH1	YDL160C	NFT1	P0CE68	1218 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	RPL20A	P0CX23	172 aa	Known RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	RPL20B	P0CX24	172 aa	Predicted RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	VMA2	P16140	517 aa	Known RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	PHO84	P25297	587 aa	Known RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	RAD57	P25301	460 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	LSB5	P25369	354 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	TIP1	P27654	210 aa	Predicted RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	HSP104	P31539	908 aa	Known RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	MNL1	P38888	796 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	LSC1	P53598	329 aa	Known RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	URH1	Q04179	340 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	SKI7	Q08491	747 aa	Predicted RBP	4.67	□□□□□ -1.66
DHH1	YDL160C	HEM2	P05373	342 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	SPO12	P17123	173 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	SMI1	P32566	505 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	QDR3	P38227	689 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	INM1	P38710	295 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	RPH1	P39956	796 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	CHS6	P40955	746 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	BET5	Q03630	159 aa		4.67	□□□□□ -1.66
DHH1	YDL160C	NUP53	Q03790	475 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms