RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C COG1P53079 417 aa5.33□□□□□ -1.56
VPS1YKR001C YGL036WP53185 909 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C LSC2P53312 427 aa5.33□□□□□ -1.56
VPS1YKR001C COS6P53344 381 aa5.33□□□□□ -1.56
VPS1YKR001C RPL6AQ02326 176 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C UME1Q03010 460 aa5.33□□□□□ -1.56
VPS1YKR001C HED1Q03937 162 aa5.33□□□□□ -1.56
VPS1YKR001C PEX12Q04370 399 aa5.33□□□□□ -1.56
VPS1YKR001C YMR027WQ04371 470 aa5.33□□□□□ -1.56
VPS1YKR001C HFD1Q04458 532 aa5.33□□□□□ -1.56
VPS1YKR001C RSB1Q08417 382 aa5.33□□□□□ -1.56
VPS1YKR001C RAX1Q08760 435 aa5.33□□□□□ -1.56
VPS1YKR001C ULA1Q12059 462 aa5.33□□□□□ -1.56
VPS1YKR001C MLH3Q12083 715 aa5.33□□□□□ -1.56
VPS1YKR001C GLO4Q12320 285 aa5.33□□□□□ -1.56
VPS1YKR001C Q0144Q9ZZW2 109 aa5.33□□□□□ -1.56
VPS1YKR001C RPS6AP0CX37 236 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C RPS6BP0CX38 236 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C MRP2P10663 115 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C FRS1P15624 595 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C STE50P25344 346 aa5.33□□□□□ -1.56
VPS1YKR001C MSS1P32559 526 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C TMT1P32643 299 aa5.33□□□□□ -1.56
VPS1YKR001C OAF3P36023 863 aa5.33□□□□□ -1.56
VPS1YKR001C URA8P38627 578 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C PCM1P38628 557 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C FAA3P39002 694 aa5.33□□□□□ -1.56
VPS1YKR001C CCT4P39078 528 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C RGI1P40043 161 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C HIS6P40545 261 aa5.33□□□□□ -1.56
VPS1YKR001C YFR018CP43599 363 aa5.33□□□□□ -1.56
VPS1YKR001C RPC17P47076 161 aa5.33□□□□□ -1.56
VPS1YKR001C TIM21P53220 239 aa5.33□□□□□ -1.56
VPS1YKR001C ROD1Q02805 837 aa5.33□□□□□ -1.56
VPS1YKR001C YPL071CQ02864 156 aa5.33□□□□□ -1.56
VPS1YKR001C YAP6Q03935 383 aa5.33□□□□□ -1.56
VPS1YKR001C YDR179W-AQ03983 463 aa5.33□□□□□ -1.56
VPS1YKR001C TIF35Q04067 274 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C PNP1Q05788 311 aa5.33□□□□□ -1.56
VPS1YKR001C VTA1Q06263 330 aa5.33□□□□□ -1.56
VPS1YKR001C PML1Q07930 204 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C UAF30Q08747 228 aa5.33□□□□□ -1.56
VPS1YKR001C PNO1Q99216 274 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C CLN3P13365 580 aa5.32□□□□□ -1.56
VPS1YKR001C GLN3P18494 730 aa5.32□□□□□ -1.56
VPS1YKR001C CHL1P22516 861 aaPredicted RBP5.32□□□□□ -1.56
VPS1YKR001C MRM1P25270 412 aa5.32□□□□□ -1.56
VPS1YKR001C SCJ1P25303 377 aa5.32□□□□□ -1.56
VPS1YKR001C ERG3P32353 365 aa5.32□□□□□ -1.56
VPS1YKR001C NVJ1P38881 321 aa5.32□□□□□ -1.56
VPS1YKR001C YER085CP40058 173 aa5.32□□□□□ -1.56
VPS1YKR001C OTU1P43558 301 aa5.32□□□□□ -1.56
VPS1YKR001C RPE1P46969 238 aa5.32□□□□□ -1.56
VPS1YKR001C TNA1P53322 534 aa5.32□□□□□ -1.56
VPS1YKR001C CWC24P53769 259 aa5.32□□□□□ -1.56
VPS1YKR001C IMP4P53941 290 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C REG1Q00816 1014 aa5.32□□□□□ -1.56
VPS1YKR001C SNP1Q00916 300 aaPredicted RBP5.32□□□□□ -1.56
VPS1YKR001C OAZ1Q02803 292 aa5.32□□□□□ -1.56
VPS1YKR001C YPR127WQ06494 345 aa5.32□□□□□ -1.56
VPS1YKR001C THI73Q07904 523 aa5.32□□□□□ -1.56
VPS1YKR001C GSH2Q08220 491 aa5.32□□□□□ -1.56
VPS1YKR001C HRK1Q08732 759 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C PKH2Q12236 1081 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C INP53Q12271 1107 aa5.32□□□□□ -1.56
VPS1YKR001C HER1Q12276 1246 aa5.32□□□□□ -1.56
VPS1YKR001C AI4P03878 556 aa5.32□□□□□ -1.56
VPS1YKR001C ADE4P04046 510 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C RPL6BP05739 176 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C GPH1P06738 902 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C PYC1P11154 1178 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C STF2P16965 84 aa5.32□□□□□ -1.56
VPS1YKR001C PHA2P32452 334 aa5.32□□□□□ -1.56
VPS1YKR001C SPC29P33419 253 aa5.32□□□□□ -1.56
VPS1YKR001C MAL32P38158 584 aa5.32□□□□□ -1.56
VPS1YKR001C FIG1P38224 298 aa5.32□□□□□ -1.56
VPS1YKR001C NPT1P39683 429 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C FMP32P43557 207 aa5.32□□□□□ -1.56
VPS1YKR001C FMP33P46998 180 aa5.32□□□□□ -1.56
VPS1YKR001C PUS4P48567 403 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C MRK1P50873 501 aa5.32□□□□□ -1.56
VPS1YKR001C YGL138CP53122 345 aa5.32□□□□□ -1.56
VPS1YKR001C CUL3P53202 744 aa5.32□□□□□ -1.56
VPS1YKR001C MAL12P53341 584 aa5.32□□□□□ -1.56
VPS1YKR001C CAF40P53829 373 aa5.32□□□□□ -1.56
VPS1YKR001C BUD22Q04347 519 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C CSM3Q04659 317 aa5.32□□□□□ -1.56
VPS1YKR001C PAL1Q05518 499 aaKnown RBP5.32□□□□□ -1.56
VPS1YKR001C MFG1Q07684 458 aa5.32□□□□□ -1.56
VPS1YKR001C YEH1Q07804 573 aa5.32□□□□□ -1.56
VPS1YKR001C AI5_BETAQ9ZZX0 354 aa5.32□□□□□ -1.56
VPS1YKR001C ADE5,7P07244 802 aaKnown RBP5.31□□□□□ -1.56
VPS1YKR001C SPE1P08432 466 aa5.31□□□□□ -1.56
VPS1YKR001C MAS1P10507 462 aa5.31□□□□□ -1.56
VPS1YKR001C RAM1P22007 431 aa5.31□□□□□ -1.56
VPS1YKR001C SNT1P25357 1226 aa5.31□□□□□ -1.56
VPS1YKR001C SKG1P36169 355 aa5.31□□□□□ -1.56
VPS1YKR001C SPC97P38863 823 aa5.31□□□□□ -1.56
VPS1YKR001C NTA1P40354 457 aa5.31□□□□□ -1.56
VPS1YKR001C LSB6P42951 607 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms